RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 CCDC102AQ96A19 550 aa21.39■■□□□ 1.01
SCARF1-206ENST00000573852 EEF2KMTQ96G04 330 aa21.39■■□□□ 1.01
SCARF1-206ENST00000573852 USP14P54578 494 aa21.39■■□□□ 1.01
SCARF1-206ENST00000573852 TTI2Q6NXR4 508 aa21.39■■□□□ 1.01
SCARF1-206ENST00000573852 IL17RBQ9NRM6 502 aa21.39■■□□□ 1.01
SCARF1-206ENST00000573852 AGPAT5Q9NUQ2 364 aa21.39■■□□□ 1.01
SCARF1-206ENST00000573852 RASSF10A6NK89 507 aa21.38■■□□□ 1.01
SCARF1-206ENST00000573852 B4DLN1 442 aa21.38■■□□□ 1.01
SCARF1-206ENST00000573852 PHACTR2O75167 634 aa21.38■■□□□ 1.01
SCARF1-206ENST00000573852 TSR1Q2NL82 804 aaKnown RBP21.38■■□□□ 1.01
SCARF1-206ENST00000573852 GIMAP8Q8ND71 665 aaPredicted RBP21.38■■□□□ 1.01
SCARF1-206ENST00000573852 KAT14Q9H8E8 782 aa21.38■■□□□ 1.01
SCARF1-206ENST00000573852 SH3GLB2Q9NR46 395 aa21.38■■□□□ 1.01
SCARF1-206ENST00000573852 CCDC194A0A1B0GVG4 234 aa21.38■■□□□ 1.01
SCARF1-206ENST00000573852 RCCD1A6NED2 376 aa21.38■■□□□ 1.01
SCARF1-206ENST00000573852 RHOBTB3O94955 611 aa21.38■■□□□ 1.01
SCARF1-206ENST00000573852 UBA7P41226 1012 aa21.38■■□□□ 1.01
SCARF1-206ENST00000573852 SBK1Q52WX2 424 aa21.38■■□□□ 1.01
SCARF1-206ENST00000573852 DUSP9Q99956 384 aaKnown RBP21.38■■□□□ 1.01
SCARF1-206ENST00000573852 KBTBD4Q9NVX7 518 aa21.38■■□□□ 1.01
SCARF1-206ENST00000573852 TFCP2L1Q9NZI6 479 aa21.38■■□□□ 1.01
SCARF1-206ENST00000573852 ARPP21Q9UBL0 812 aaPredicted RBP21.38■■□□□ 1.01
SCARF1-206ENST00000573852 PCDHA6Q9UN73 950 aa21.38■■□□□ 1.01
SCARF1-206ENST00000573852 PCDHA8Q9Y5H6 950 aa21.38■■□□□ 1.01
SCARF1-206ENST00000573852 SAR1BQ9Y6B6 198 aa21.38■■□□□ 1.01
SCARF1-206ENST00000573852 RREB1Q92766 1687 aa21.38■■□□□ 1.01
SCARF1-206ENST00000573852 PSMA7O14818 248 aa21.37■■□□□ 1.01
SCARF1-206ENST00000573852 USP17L8P0C7I0 530 aa21.37■■□□□ 1.01
SCARF1-206ENST00000573852 SRGNP10124 158 aa21.37■■□□□ 1.01
SCARF1-206ENST00000573852 KLK7P49862 253 aa21.37■■□□□ 1.01
SCARF1-206ENST00000573852 MEA1Q16626 185 aa21.37■■□□□ 1.01
SCARF1-206ENST00000573852 INF2Q27J81 1249 aa21.37■■□□□ 1.01
SCARF1-206ENST00000573852 SLC35G1Q2M3R5 365 aa21.37■■□□□ 1.01
SCARF1-206ENST00000573852 PAPD7Q5XG87 772 aaKnown RBP21.37■■□□□ 1.01
SCARF1-206ENST00000573852 TTYH3Q9C0H2 523 aa21.37■■□□□ 1.01
SCARF1-206ENST00000573852 FEZ2Q9UHY8 353 aaPredicted RBP21.37■■□□□ 1.01
SCARF1-206ENST00000573852 LCMT1Q9UIC8 334 aa21.37■■□□□ 1.01
SCARF1-206ENST00000573852 KIAA1551Q9HCM1 1747 aa21.37■■□□□ 1.01
SCARF1-206ENST00000573852 DNM2P50570 870 aa21.37■■□□□ 1.01
SCARF1-206ENST00000573852 TFAP4Q01664 338 aa21.37■■□□□ 1.01
SCARF1-206ENST00000573852 PNMA1Q8ND90 353 aa21.37■■□□□ 1.01
SCARF1-206ENST00000573852 FAM71BQ8TC56 605 aa21.37■■□□□ 1.01
SCARF1-206ENST00000573852 LACRTQ9GZZ8 138 aa21.37■■□□□ 1.01
SCARF1-206ENST00000573852 MAGEC2Q9UBF1 373 aaPredicted RBP21.37■■□□□ 1.01
SCARF1-206ENST00000573852 STIM1Q13586 685 aa21.36■■□□□ 1.01
SCARF1-206ENST00000573852 CAPZA3Q96KX2 299 aa21.36■■□□□ 1.01
SCARF1-206ENST00000573852 TUBGCP2Q9BSJ2 902 aa21.36■■□□□ 1.01
SCARF1-206ENST00000573852 MCM9Q9NXL9 1143 aa21.36■■□□□ 1.01
SCARF1-206ENST00000573852 VGLL3A8MV65 326 aa21.36■■□□□ 1.01
SCARF1-206ENST00000573852 HSP90B2PQ58FF3 399 aa21.36■■□□□ 1.01
SCARF1-206ENST00000573852 KIAA1328Q86T90 577 aa21.36■■□□□ 1.01
SCARF1-206ENST00000573852 CCSER1Q9C0I3 900 aa21.36■■□□□ 1.01
SCARF1-206ENST00000573852 JAG2Q9Y219 1238 aa21.36■■□□□ 1.01
SCARF1-206ENST00000573852 ZNF652Q9Y2D9 606 aa21.36■■□□□ 1.01
SCARF1-206ENST00000573852 COL14A1Q05707 1796 aaKnown RBP21.36■■□□□ 1.01
SCARF1-206ENST00000573852 KRT83P78385 493 aa21.35■■□□□ 1.01
SCARF1-206ENST00000573852 JAKMIP2Q96AA8 810 aa21.35■■□□□ 1.01
SCARF1-206ENST00000573852 EXOC1Q9NV70 894 aa21.35■■□□□ 1.01
SCARF1-206ENST00000573852 CWC15Q9P013 229 aaKnown RBP21.35■■□□□ 1.01
SCARF1-206ENST00000573852 CSGALNACT2Q8N6G5 542 aa21.35■■□□□ 1.01
SCARF1-206ENST00000573852 MAD2L2Q9UI95 211 aa21.35■■□□□ 1.01
SCARF1-206ENST00000573852 ZNF662Q6ZS27 426 aa21.34■■□□□ 1.01
SCARF1-206ENST00000573852 DYNLL2Q96FJ2 89 aa21.34■■□□□ 1.01
SCARF1-206ENST00000573852 NHEJ1Q9H9Q4 299 aaPredicted RBP21.34■■□□□ 1.01
SCARF1-206ENST00000573852 DUSP10Q9Y6W6 482 aa21.34■■□□□ 1.01
SCARF1-206ENST00000573852 CASZ1Q86V15 1759 aa21.34■■□□□ 1.01
SCARF1-206ENST00000573852 CYTH3O43739 400 aa21.34■■□□□ 1.01
SCARF1-206ENST00000573852 MYL1P05976 194 aa21.34■■□□□ 1.01
SCARF1-206ENST00000573852 TRIM21P19474 475 aaKnown RBP21.34■■□□□ 1.01
SCARF1-206ENST00000573852 LEKR1Q6ZMV7 388 aa21.34■■□□□ 1.01
SCARF1-206ENST00000573852 KRT86O43790 486 aa21.33■■□□□ 1.01
SCARF1-206ENST00000573852 HIBADHP31937 336 aaKnown RBP21.33■■□□□ 1.01
SCARF1-206ENST00000573852 TBC1D8BQ0IIM8 1120 aa21.33■■□□□ 1.01
SCARF1-206ENST00000573852 GRM4Q14833 912 aa21.33■■□□□ 1.01
SCARF1-206ENST00000573852 HEATR3Q7Z4Q2 680 aa21.33■■□□□ 1.01
SCARF1-206ENST00000573852 DGKHQ86XP1 1220 aa21.33■■□□□ 1.01
SCARF1-206ENST00000573852 DHTKD1Q96HY7 919 aaPredicted RBP21.33■■□□□ 1.01
SCARF1-206ENST00000573852 MED4Q9NPJ6 270 aa21.33■■□□□ 1.01
SCARF1-206ENST00000573852 NKRFO15226 690 aaKnown RBP eCLIP21.33■■□□□ 1.01
SCARF1-206ENST00000573852 CYLC1P35663 651 aaPredicted RBP21.33■■□□□ 1.01
SCARF1-206ENST00000573852 ANKRD40Q6AI12 368 aa21.33■■□□□ 1.01
SCARF1-206ENST00000573852 BICDL1Q6ZP65 573 aa21.33■■□□□ 1.01
SCARF1-206ENST00000573852 NOC3LQ8WTT2 800 aaKnown RBP21.33■■□□□ 1.01
SCARF1-206ENST00000573852 MTMR7Q9Y216 660 aa21.33■■□□□ 1.01
SCARF1-206ENST00000573852 USP17L3A6NCW0 530 aa21.32■■□□□ 1
SCARF1-206ENST00000573852 USP17L4A6NCW7 530 aa21.32■■□□□ 1
SCARF1-206ENST00000573852 ZNF185O15231 689 aa21.32■■□□□ 1
SCARF1-206ENST00000573852 ZMYND10O75800 440 aa21.32■■□□□ 1
SCARF1-206ENST00000573852 SYF2O95926 243 aaKnown RBP21.32■■□□□ 1
SCARF1-206ENST00000573852 PLCG1P19174 1290 aa21.32■■□□□ 1
SCARF1-206ENST00000573852 FOXR1Q6PIV2 292 aa21.32■■□□□ 1
SCARF1-206ENST00000573852 USP17L1Q7RTZ2 530 aa21.32■■□□□ 1
SCARF1-206ENST00000573852 ACBD3Q9H3P7 528 aa21.32■■□□□ 1
SCARF1-206ENST00000573852 VIPAS39Q9H9C1 493 aa21.32■■□□□ 1
SCARF1-206ENST00000573852 FLT1P17948 1338 aa21.32■■□□□ 1
SCARF1-206ENST00000573852 STXBP3O00186 592 aa21.32■■□□□ 1
SCARF1-206ENST00000573852 PDE2AO00408 941 aaPredicted RBP21.32■■□□□ 1
SCARF1-206ENST00000573852 CYP27A1Q02318 531 aa21.32■■□□□ 1
SCARF1-206ENST00000573852 STK4Q13043 487 aa21.32■■□□□ 1
SCARF1-206ENST00000573852 CLEC4GQ6UXB4 293 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms