RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-216ENST00000573795 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.16■■□□□ 1.78
SNF8-216ENST00000573795 ZNF536O15090 1300 aa26.15■■□□□ 1.78
SNF8-216ENST00000573795 VCANP13611 3396 aa26.15■■□□□ 1.78
SNF8-216ENST00000573795 MOXD2PA6NHM9 499 aa26.15■■□□□ 1.78
SNF8-216ENST00000573795 CST5P28325 142 aaPredicted RBP26.15■■□□□ 1.78
SNF8-216ENST00000573795 SMAD3P84022 425 aaKnown RBP26.15■■□□□ 1.78
SNF8-216ENST00000573795 PDE4BQ07343 736 aa26.15■■□□□ 1.78
SNF8-216ENST00000573795 TOX2Q96NM4 488 aa26.15■■□□□ 1.78
SNF8-216ENST00000573795 TTYH1Q9H313 450 aaPredicted RBP26.15■■□□□ 1.78
SNF8-216ENST00000573795 FBXO40Q9UH90 709 aa26.15■■□□□ 1.78
SNF8-216ENST00000573795 CTDP1Q9Y5B0 961 aaPredicted RBP26.15■■□□□ 1.78
SNF8-216ENST00000573795 TMEM232C9JQI7 657 aa26.14■■□□□ 1.78
SNF8-216ENST00000573795 CCDC129Q6ZRS4 1044 aa26.14■■□□□ 1.78
SNF8-216ENST00000573795 ARMCX2Q7L311 632 aa26.14■■□□□ 1.78
SNF8-216ENST00000573795 GMCL1Q96IK5 515 aa26.14■■□□□ 1.78
SNF8-216ENST00000573795 CDX2Q99626 313 aaPredicted RBP26.14■■□□□ 1.78
SNF8-216ENST00000573795 UPF3AQ9H1J1 476 aaKnown RBP26.14■■□□□ 1.78
SNF8-216ENST00000573795 SEMA6BQ9H3T3 888 aa26.14■■□□□ 1.78
SNF8-216ENST00000573795 ABHD16BQ9H3Z7 469 aa26.14■■□□□ 1.78
SNF8-216ENST00000573795 LCTP09848 1927 aa26.14■■□□□ 1.77
SNF8-216ENST00000573795 RAG1P15918 1043 aa26.13■■□□□ 1.77
SNF8-216ENST00000573795 MX1P20591 662 aa26.13■■□□□ 1.77
SNF8-216ENST00000573795 CNTN2Q02246 1040 aa26.13■■□□□ 1.77
SNF8-216ENST00000573795 CCDC144BQ3MJ40 725 aa26.13■■□□□ 1.77
SNF8-216ENST00000573795 RASGRP2Q7LDG7 609 aa26.13■■□□□ 1.77
SNF8-216ENST00000573795 NUP133Q8WUM0 1156 aa26.13■■□□□ 1.77
SNF8-216ENST00000573795 INCENPQ9NQS7 918 aa26.13■■□□□ 1.77
SNF8-216ENST00000573795 HOMER2Q9NSB8 354 aa26.13■■□□□ 1.77
SNF8-216ENST00000573795 TMEM39AQ9NV64 488 aa26.13■■□□□ 1.77
SNF8-216ENST00000573795 CTAGE5O15320 804 aa26.12■■□□□ 1.77
SNF8-216ENST00000573795 STAT2P52630 851 aa26.12■■□□□ 1.77
SNF8-216ENST00000573795 CCDC144CPQ8IYA2 1237 aa26.12■■□□□ 1.77
SNF8-216ENST00000573795 FAM133AQ8N9E0 248 aa26.12■■□□□ 1.77
SNF8-216ENST00000573795 CHMP4CQ96CF2 233 aa26.12■■□□□ 1.77
SNF8-216ENST00000573795 AGBL1Q96MI9 1066 aa26.12■■□□□ 1.77
SNF8-216ENST00000573795 IL17RBQ9NRM6 502 aa26.12■■□□□ 1.77
SNF8-216ENST00000573795 TBX21Q9UL17 535 aa26.12■■□□□ 1.77
SNF8-216ENST00000573795 SPTBN5Q9NRC6 3674 aaKnown RBP26.11■■□□□ 1.77
SNF8-216ENST00000573795 SLC3A2P08195 630 aaKnown RBP26.11■■□□□ 1.77
SNF8-216ENST00000573795 C6orf222P0C671 652 aaPredicted RBP26.11■■□□□ 1.77
SNF8-216ENST00000573795 FDX1P10109 184 aa26.11■■□□□ 1.77
SNF8-216ENST00000573795 CDK7P50613 346 aa26.11■■□□□ 1.77
SNF8-216ENST00000573795 GJA9P57773 515 aa26.11■■□□□ 1.77
SNF8-216ENST00000573795 CTDSPL2Q05D32 466 aa26.11■■□□□ 1.77
SNF8-216ENST00000573795 STAG1Q8WVM7 1258 aa26.11■■□□□ 1.77
SNF8-216ENST00000573795 ACAD9Q9H845 621 aa26.11■■□□□ 1.77
SNF8-216ENST00000573795 A1CFQ9NQ94 594 aaKnown RBP26.11■■□□□ 1.77
SNF8-216ENST00000573795 NMT2O60551 498 aa26.1■■□□□ 1.77
SNF8-216ENST00000573795 ASGR1P07306 291 aa26.1■■□□□ 1.77
SNF8-216ENST00000573795 MCCP23508 829 aa26.1■■□□□ 1.77
SNF8-216ENST00000573795 FPGSQ05932 587 aa26.1■■□□□ 1.77
SNF8-216ENST00000573795 VPS53Q5VIR6 699 aa26.1■■□□□ 1.77
SNF8-216ENST00000573795 FAM160B2Q86V87 743 aa26.1■■□□□ 1.77
SNF8-216ENST00000573795 PHF6Q8IWS0 365 aaKnown RBP eCLIP26.1■■□□□ 1.77
SNF8-216ENST00000573795 RNPC3Q96LT9 517 aaKnown RBP26.1■■□□□ 1.77
SNF8-216ENST00000573795 RNF146Q9NTX7 359 aa26.1■■□□□ 1.77
SNF8-216ENST00000573795 ASTN1O14525 1302 aa26.1■■□□□ 1.77
SNF8-216ENST00000573795 ELP1O95163 1332 aa26.1■■□□□ 1.77
SNF8-216ENST00000573795 SOWAHBA6NEL2 793 aa26.09■■□□□ 1.77
SNF8-216ENST00000573795 DCDC2CA8MYV0 355 aa26.09■■□□□ 1.77
SNF8-216ENST00000573795 PLA2G6O60733 806 aa26.09■■□□□ 1.77
SNF8-216ENST00000573795 SLC1A4P43007 532 aa26.09■■□□□ 1.77
SNF8-216ENST00000573795 GLT1D1Q96MS3 346 aa26.09■■□□□ 1.77
SNF8-216ENST00000573795 C11orf97A0A1B0GVM6 126 aaPredicted RBP26.08■■□□□ 1.77
SNF8-216ENST00000573795 NOVP48745 357 aa26.08■■□□□ 1.77
SNF8-216ENST00000573795 NKX3-2P78367 333 aa26.08■■□□□ 1.77
SNF8-216ENST00000573795 KCTD1Q719H9 257 aa26.08■■□□□ 1.77
SNF8-216ENST00000573795 CHURC1Q8WUH1 139 aa26.08■■□□□ 1.77
SNF8-216ENST00000573795 ISY1Q9ULR0 285 aaKnown RBP26.08■■□□□ 1.77
SNF8-216ENST00000573795 STX8Q9UNK0 236 aa26.08■■□□□ 1.77
SNF8-216ENST00000573795 DDX49Q9Y6V7 483 aaKnown RBP26.08■■□□□ 1.77
SNF8-216ENST00000573795 TIMP1P01033 207 aa26.07■■□□□ 1.76
SNF8-216ENST00000573795 SNAP25P60880 206 aa26.07■■□□□ 1.76
SNF8-216ENST00000573795 PCSK9Q8NBP7 692 aaKnown RBP26.07■■□□□ 1.76
SNF8-216ENST00000573795 MYLIPQ8WY64 445 aa26.07■■□□□ 1.76
SNF8-216ENST00000573795 COL25A1Q9BXS0 654 aaPredicted RBP26.07■■□□□ 1.76
SNF8-216ENST00000573795 ANAPC4Q9UJX5 808 aa26.07■■□□□ 1.76
SNF8-216ENST00000573795 TSPY2A6NKD2 308 aa26.06■■□□□ 1.76
SNF8-216ENST00000573795 TKFCQ3LXA3 575 aa26.06■■□□□ 1.76
SNF8-216ENST00000573795 RCSD1Q6JBY9 416 aa26.06■■□□□ 1.76
SNF8-216ENST00000573795 TRERF1Q96PN7 1200 aa26.06■■□□□ 1.76
SNF8-216ENST00000573795 PRR12Q9ULL5 1215 aa26.06■■□□□ 1.76
SNF8-216ENST00000573795 ARVCFO00192 962 aa26.05■■□□□ 1.76
SNF8-216ENST00000573795 PTGS1P23219 599 aa26.05■■□□□ 1.76
SNF8-216ENST00000573795 IKQ13123 557 aaPredicted RBP26.05■■□□□ 1.76
SNF8-216ENST00000573795 MUM1L1Q5H9M0 696 aa26.05■■□□□ 1.76
SNF8-216ENST00000573795 GNASQ5JWF2 1037 aa26.05■■□□□ 1.76
SNF8-216ENST00000573795 CCDC174Q6PII3 467 aa26.05■■□□□ 1.76
SNF8-216ENST00000573795 SPC25Q9HBM1 224 aa26.05■■□□□ 1.76
SNF8-216ENST00000573795 GNEQ9Y223 722 aaKnown RBP26.05■■□□□ 1.76
SNF8-216ENST00000573795 MROH7Q68CQ1 1323 aa26.05■■□□□ 1.76
SNF8-216ENST00000573795 A0A0U1RQG5 324 aaPredicted RBP26.04■■□□□ 1.76
SNF8-216ENST00000573795 FGRP09769 529 aa26.04■■□□□ 1.76
SNF8-216ENST00000573795 ALAS1P13196 640 aa26.04■■□□□ 1.76
SNF8-216ENST00000573795 RRP1P56182 461 aaKnown RBP26.04■■□□□ 1.76
SNF8-216ENST00000573795 BEX3Q00994 111 aa26.04■■□□□ 1.76
SNF8-216ENST00000573795 PPP4R3BQ5MIZ7 849 aa26.04■■□□□ 1.76
SNF8-216ENST00000573795 MFSD5Q6N075 450 aa26.04■■□□□ 1.76
SNF8-216ENST00000573795 C16orf59Q7L2K0 433 aa26.04■■□□□ 1.76
SNF8-216ENST00000573795 FAM126BQ8IXS8 530 aa26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms