RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 PRKAR2AP13861 404 aaKnown RBP15.82■□□□□ 0.12
RPAIN-213ENST00000573577 GJA8P48165 433 aa15.82■□□□□ 0.12
RPAIN-213ENST00000573577 OAZ1P54368 228 aa15.82■□□□□ 0.12
RPAIN-213ENST00000573577 ANTXR2P58335 489 aa15.82■□□□□ 0.12
RPAIN-213ENST00000573577 C8orf34Q49A92 452 aa15.82■□□□□ 0.12
RPAIN-213ENST00000573577 GPATCH4Q5T3I0 446 aaKnown RBP15.82■□□□□ 0.12
RPAIN-213ENST00000573577 MAP3K21Q5TCX8 1036 aa15.82■□□□□ 0.12
RPAIN-213ENST00000573577 DHX32Q7L7V1 743 aaKnown RBP15.82■□□□□ 0.12
RPAIN-213ENST00000573577 CHST3Q7LGC8 479 aa15.82■□□□□ 0.12
RPAIN-213ENST00000573577 DPP9Q86TI2 863 aa15.82■□□□□ 0.12
RPAIN-213ENST00000573577 CPXCR1Q8N123 301 aa15.82■□□□□ 0.12
RPAIN-213ENST00000573577 U2AF1L4Q8WU68 220 aaKnown RBP15.82■□□□□ 0.12
RPAIN-213ENST00000573577 SHISA4Q96DD7 197 aa15.82■□□□□ 0.12
RPAIN-213ENST00000573577 JAKMIP1Q96N16 626 aaKnown RBP15.82■□□□□ 0.12
RPAIN-213ENST00000573577 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.82■□□□□ 0.12
RPAIN-213ENST00000573577 RPTORQ8N122 1335 aa15.82■□□□□ 0.12
RPAIN-213ENST00000573577 COBLO75128 1261 aa15.81■□□□□ 0.12
RPAIN-213ENST00000573577 PDHBP11177 359 aa15.81■□□□□ 0.12
RPAIN-213ENST00000573577 KCTD2Q14681 263 aa15.81■□□□□ 0.12
RPAIN-213ENST00000573577 ADCK5Q3MIX3 580 aa15.81■□□□□ 0.12
RPAIN-213ENST00000573577 BLOC1S2Q6QNY1 142 aa15.81■□□□□ 0.12
RPAIN-213ENST00000573577 NPLOC4Q8TAT6 608 aa15.81■□□□□ 0.12
RPAIN-213ENST00000573577 IGDCC4Q8TDY8 1250 aa15.81■□□□□ 0.12
RPAIN-213ENST00000573577 MMP19Q99542 508 aa15.81■□□□□ 0.12
RPAIN-213ENST00000573577 RAVER2Q9HCJ3 691 aaKnown RBP15.81■□□□□ 0.12
RPAIN-213ENST00000573577 HMX1Q9NP08 348 aaPredicted RBP15.81■□□□□ 0.12
RPAIN-213ENST00000573577 SLC5A4Q9NY91 659 aa15.81■□□□□ 0.12
RPAIN-213ENST00000573577 FLRT1Q9NZU1 646 aa15.81■□□□□ 0.12
RPAIN-213ENST00000573577 CCDC69A6NI79 296 aa15.8■□□□□ 0.12
RPAIN-213ENST00000573577 SGPL1O95470 568 aa15.8■□□□□ 0.12
RPAIN-213ENST00000573577 SNHG28P0DPA3 235 aa15.8■□□□□ 0.12
RPAIN-213ENST00000573577 LIFRP42702 1097 aa15.8■□□□□ 0.12
RPAIN-213ENST00000573577 ANAPC15P60006 121 aa15.8■□□□□ 0.12
RPAIN-213ENST00000573577 FGD1P98174 961 aa15.8■□□□□ 0.12
RPAIN-213ENST00000573577 CACNB2Q08289 660 aaPredicted RBP15.8■□□□□ 0.12
RPAIN-213ENST00000573577 ASPRV1Q53RT3 343 aa15.8■□□□□ 0.12
RPAIN-213ENST00000573577 MFSD14CQ5VZR4 134 aa15.8■□□□□ 0.12
RPAIN-213ENST00000573577 BTNL9Q6UXG8 535 aa15.8■□□□□ 0.12
RPAIN-213ENST00000573577 NFXL1Q6ZNB6 911 aa15.8■□□□□ 0.12
RPAIN-213ENST00000573577 CATIPQ7Z7H3 387 aa15.8■□□□□ 0.12
RPAIN-213ENST00000573577 DEFB118Q96PH6 123 aa15.8■□□□□ 0.12
RPAIN-213ENST00000573577 PRR12Q9ULL5 1215 aa15.8■□□□□ 0.12
RPAIN-213ENST00000573577 RIPK3Q9Y572 518 aa15.8■□□□□ 0.12
RPAIN-213ENST00000573577 MKI67P46013 3256 aaKnown RBP15.79■□□□□ 0.12
RPAIN-213ENST00000573577 FRMPD2Q68DX3 1309 aaPredicted RBP15.79■□□□□ 0.12
RPAIN-213ENST00000573577 SH2B2O14492 632 aaPredicted RBP15.79■□□□□ 0.12
RPAIN-213ENST00000573577 IGHA2P01877 340 aa15.79■□□□□ 0.12
RPAIN-213ENST00000573577 PARP1P09874 1014 aaKnown RBP15.79■□□□□ 0.12
RPAIN-213ENST00000573577 CASTP20810 708 aaKnown RBP15.79■□□□□ 0.12
RPAIN-213ENST00000573577 SLC16A2P36021 539 aa15.79■□□□□ 0.12
RPAIN-213ENST00000573577 SLC4A3P48751 1232 aa15.79■□□□□ 0.12
RPAIN-213ENST00000573577 EXOSC10Q01780 885 aaKnown RBP15.79■□□□□ 0.12
RPAIN-213ENST00000573577 ZNF543Q08ER8 600 aa15.79■□□□□ 0.12
RPAIN-213ENST00000573577 OLFML2BQ68BL8 750 aa15.79■□□□□ 0.12
RPAIN-213ENST00000573577 TTBK2Q6IQ55 1244 aa15.79■□□□□ 0.12
RPAIN-213ENST00000573577 LY9Q9HBG7 655 aa15.79■□□□□ 0.12
RPAIN-213ENST00000573577 GPCPD1Q9NPB8 672 aa15.79■□□□□ 0.12
RPAIN-213ENST00000573577 TNRC18O15417 2968 aaPredicted RBP15.79■□□□□ 0.12
RPAIN-213ENST00000573577 ZNF536O15090 1300 aa15.78■□□□□ 0.12
RPAIN-213ENST00000573577 DDAH1O94760 285 aa15.78■□□□□ 0.12
RPAIN-213ENST00000573577 PGK2P07205 417 aa15.78■□□□□ 0.12
RPAIN-213ENST00000573577 CAPN2P17655 700 aa15.78■□□□□ 0.12
RPAIN-213ENST00000573577 CYP2C19P33261 490 aa15.78■□□□□ 0.12
RPAIN-213ENST00000573577 SYDE2Q5VT97 1194 aa15.78■□□□□ 0.12
RPAIN-213ENST00000573577 SYNE3Q6ZMZ3 975 aa15.78■□□□□ 0.12
RPAIN-213ENST00000573577 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.78■□□□□ 0.12
RPAIN-213ENST00000573577 CHST13Q8NET6 341 aa15.78■□□□□ 0.12
RPAIN-213ENST00000573577 MAML3Q96JK9 1138 aa15.78■□□□□ 0.12
RPAIN-213ENST00000573577 TM6SF1Q9BZW5 370 aa15.78■□□□□ 0.12
RPAIN-213ENST00000573577 CRISPLD2Q9H0B8 497 aa15.78■□□□□ 0.12
RPAIN-213ENST00000573577 UPF2Q9HAU5 1272 aaKnown RBP15.78■□□□□ 0.12
RPAIN-213ENST00000573577 FBXO40Q9UH90 709 aa15.78■□□□□ 0.12
RPAIN-213ENST00000573577 TFRCP02786 760 aaKnown RBP15.77■□□□□ 0.12
RPAIN-213ENST00000573577 CALM1P0DP23 149 aa15.77■□□□□ 0.12
RPAIN-213ENST00000573577 CALM2P0DP24 149 aa15.77■□□□□ 0.12
RPAIN-213ENST00000573577 CALM3P0DP25 149 aa15.77■□□□□ 0.12
RPAIN-213ENST00000573577 RPS6KB1P23443 525 aa15.77■□□□□ 0.12
RPAIN-213ENST00000573577 CCND3P30281 292 aaPredicted RBP15.77■□□□□ 0.12
RPAIN-213ENST00000573577 SNAP25P60880 206 aa15.77■□□□□ 0.12
RPAIN-213ENST00000573577 CCDC174Q6PII3 467 aa15.77■□□□□ 0.12
RPAIN-213ENST00000573577 SGMS1Q86VZ5 419 aa15.77■□□□□ 0.12
RPAIN-213ENST00000573577 AGBL1Q96MI9 1066 aa15.77■□□□□ 0.12
RPAIN-213ENST00000573577 MAP3K14Q99558 947 aa15.77■□□□□ 0.12
RPAIN-213ENST00000573577 LRRC2Q9BYS8 371 aa15.77■□□□□ 0.12
RPAIN-213ENST00000573577 RANBP17Q9H2T7 1088 aaKnown RBP15.77■□□□□ 0.12
RPAIN-213ENST00000573577 HOMER2Q9NSB8 354 aa15.77■□□□□ 0.12
RPAIN-213ENST00000573577 SLC12A7Q9Y666 1083 aa15.77■□□□□ 0.12
RPAIN-213ENST00000573577 CYP46A1Q9Y6A2 500 aa15.77■□□□□ 0.12
RPAIN-213ENST00000573577 SEC24BO95487 1268 aa15.76■□□□□ 0.11
RPAIN-213ENST00000573577 KIF5BP33176 963 aa15.76■□□□□ 0.11
RPAIN-213ENST00000573577 TROAPQ12815 778 aa15.76■□□□□ 0.11
RPAIN-213ENST00000573577 ZNF792Q3KQV3 632 aa15.76■□□□□ 0.11
RPAIN-213ENST00000573577 TKFCQ3LXA3 575 aa15.76■□□□□ 0.11
RPAIN-213ENST00000573577 RUFY3Q7L099 469 aa15.76■□□□□ 0.11
RPAIN-213ENST00000573577 ZNF654Q8IZM8 581 aa15.76■□□□□ 0.11
RPAIN-213ENST00000573577 CTCFLQ8NI51 663 aaPredicted RBP15.76■□□□□ 0.11
RPAIN-213ENST00000573577 NUP133Q8WUM0 1156 aa15.76■□□□□ 0.11
RPAIN-213ENST00000573577 DDX11Q96FC9 970 aa15.76■□□□□ 0.11
RPAIN-213ENST00000573577 ACAD9Q9H845 621 aa15.76■□□□□ 0.11
RPAIN-213ENST00000573577 SENP2Q9HC62 589 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms