RNA–Protein interactions for RNA: ENST00000573332.5

LITAF-212, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-212ENST00000573332 SOCS4Q8WXH5 440 aa20.1■□□□□ 0.81
LITAF-212ENST00000573332 USP6NLQ92738 828 aa20.1■□□□□ 0.81
LITAF-212ENST00000573332 BRF1Q92994 677 aa20.1■□□□□ 0.81
LITAF-212ENST00000573332 MTMR8Q96EF0 704 aa20.1■□□□□ 0.81
LITAF-212ENST00000573332 LZTS2Q9BRK4 669 aa20.1■□□□□ 0.81
LITAF-212ENST00000573332 MYL10Q9BUA6 226 aa20.1■□□□□ 0.81
LITAF-212ENST00000573332 UPF3BQ9BZI7 483 aaKnown RBP20.1■□□□□ 0.81
LITAF-212ENST00000573332 MCOLN1Q9GZU1 580 aa20.1■□□□□ 0.81
LITAF-212ENST00000573332 CPVLQ9H3G5 476 aa20.1■□□□□ 0.81
LITAF-212ENST00000573332 RIOX1Q9H6W3 641 aa20.1■□□□□ 0.81
LITAF-212ENST00000573332 JMJD4Q9H9V9 463 aa20.1■□□□□ 0.81
LITAF-212ENST00000573332 RIPK3Q9Y572 518 aa20.1■□□□□ 0.81
LITAF-212ENST00000573332 ECM2O94769 699 aaPredicted RBP20.09■□□□□ 0.81
LITAF-212ENST00000573332 FLT3LGP49771 235 aa20.09■□□□□ 0.81
LITAF-212ENST00000573332 PRKCZQ05513 592 aa20.09■□□□□ 0.81
LITAF-212ENST00000573332 GRB14Q14449 540 aa20.09■□□□□ 0.81
LITAF-212ENST00000573332 PPP2R5BQ15173 497 aa20.09■□□□□ 0.81
LITAF-212ENST00000573332 CHST13Q8NET6 341 aa20.09■□□□□ 0.81
LITAF-212ENST00000573332 NUDT12Q9BQG2 462 aa20.09■□□□□ 0.81
LITAF-212ENST00000573332 C22orf23Q9BZE7 217 aa20.09■□□□□ 0.81
LITAF-212ENST00000573332 FBXO40Q9UH90 709 aa20.09■□□□□ 0.81
LITAF-212ENST00000573332 GABRQQ9UN88 632 aa20.09■□□□□ 0.81
LITAF-212ENST00000573332 IVNS1ABPQ9Y6Y0 642 aa20.09■□□□□ 0.81
LITAF-212ENST00000573332 KLF18A0A0U1RQI7 1052 aa20.08■□□□□ 0.81
LITAF-212ENST00000573332 ZBTB43O43298 467 aa20.08■□□□□ 0.81
LITAF-212ENST00000573332 SNAP25P60880 206 aa20.08■□□□□ 0.81
LITAF-212ENST00000573332 TOB2Q14106 344 aaPredicted RBP20.08■□□□□ 0.81
LITAF-212ENST00000573332 SLC35G1Q2M3R5 365 aa20.08■□□□□ 0.81
LITAF-212ENST00000573332 AGBL1Q96MI9 1066 aa20.08■□□□□ 0.81
LITAF-212ENST00000573332 SPZ1Q9BXG8 430 aa20.08■□□□□ 0.81
LITAF-212ENST00000573332 BACH2Q9BYV9 841 aa20.08■□□□□ 0.81
LITAF-212ENST00000573332 UPF2Q9HAU5 1272 aaKnown RBP20.08■□□□□ 0.81
LITAF-212ENST00000573332 CWC22Q9HCG8 908 aaKnown RBP20.08■□□□□ 0.81
LITAF-212ENST00000573332 PDRG1Q9NUG6 133 aa20.08■□□□□ 0.81
LITAF-212ENST00000573332 CYTH3O43739 400 aa20.07■□□□□ 0.8
LITAF-212ENST00000573332 HOXC6P09630 235 aa20.07■□□□□ 0.8
LITAF-212ENST00000573332 FCER1AP12319 257 aa20.07■□□□□ 0.8
LITAF-212ENST00000573332 XRCC5P13010 732 aaKnown RBP20.07■□□□□ 0.8
LITAF-212ENST00000573332 APOBRQ0VD83 1088 aa20.07■□□□□ 0.8
LITAF-212ENST00000573332 WDR78Q5VTH9 848 aa20.07■□□□□ 0.8
LITAF-212ENST00000573332 CCDC174Q6PII3 467 aa20.07■□□□□ 0.8
LITAF-212ENST00000573332 NBPF11Q86T75 865 aa20.07■□□□□ 0.8
LITAF-212ENST00000573332 MICU3Q86XE3 530 aa20.07■□□□□ 0.8
LITAF-212ENST00000573332 RBM28Q9NW13 759 aaKnown RBP20.07■□□□□ 0.8
LITAF-212ENST00000573332 CCPG1Q9ULG6 757 aa20.07■□□□□ 0.8
LITAF-212ENST00000573332 PTCH2Q9Y6C5 1203 aa20.07■□□□□ 0.8
LITAF-212ENST00000573332 ZSWIM8A7E2V4 1837 aa20.06■□□□□ 0.8
LITAF-212ENST00000573332 RXRAP19793 462 aa20.06■□□□□ 0.8
LITAF-212ENST00000573332 MAP2K5Q13163 448 aa20.06■□□□□ 0.8
LITAF-212ENST00000573332 CDC37Q16543 378 aaPredicted RBP20.06■□□□□ 0.8
LITAF-212ENST00000573332 RAET1EQ8TD07 263 aa20.06■□□□□ 0.8
LITAF-212ENST00000573332 PXYLP1Q8TE99 480 aa20.06■□□□□ 0.8
LITAF-212ENST00000573332 VAT1LQ9HCJ6 419 aa20.06■□□□□ 0.8
LITAF-212ENST00000573332 NID2Q14112 1375 aa20.06■□□□□ 0.8
LITAF-212ENST00000573332 MGAMO43451 1857 aa20.05■□□□□ 0.8
LITAF-212ENST00000573332 COL11A1P12107 1806 aaPredicted RBP20.05■□□□□ 0.8
LITAF-212ENST00000573332 ZBTB5O15062 677 aa20.05■□□□□ 0.8
LITAF-212ENST00000573332 DHX16O60231 1041 aaKnown RBP20.05■□□□□ 0.8
LITAF-212ENST00000573332 RGS2P41220 211 aa20.05■□□□□ 0.8
LITAF-212ENST00000573332 KCTD2Q14681 263 aa20.05■□□□□ 0.8
LITAF-212ENST00000573332 QRICH1Q2TAL8 776 aa20.05■□□□□ 0.8
LITAF-212ENST00000573332 TMTC3Q6ZXV5 915 aa20.05■□□□□ 0.8
LITAF-212ENST00000573332 SRBD1Q8N5C6 995 aaKnown RBP20.05■□□□□ 0.8
LITAF-212ENST00000573332 ZNF274Q96GC6 653 aaPredicted RBP20.05■□□□□ 0.8
LITAF-212ENST00000573332 TRERF1Q96PN7 1200 aa20.05■□□□□ 0.8
LITAF-212ENST00000573332 KIF2CQ99661 725 aa20.05■□□□□ 0.8
LITAF-212ENST00000573332 MAF1Q9H063 256 aa20.05■□□□□ 0.8
LITAF-212ENST00000573332 ACAD9Q9H845 621 aa20.05■□□□□ 0.8
LITAF-212ENST00000573332 RNF146Q9NTX7 359 aa20.05■□□□□ 0.8
LITAF-212ENST00000573332 FAM217BQ9NTX9 383 aaPredicted RBP20.05■□□□□ 0.8
LITAF-212ENST00000573332 HPS5Q9UPZ3 1129 aa20.05■□□□□ 0.8
LITAF-212ENST00000573332 CCDC196A0A1B0GTZ2 297 aa20.04■□□□□ 0.8
LITAF-212ENST00000573332 GOLGA8AA7E2F4 631 aa20.04■□□□□ 0.8
LITAF-212ENST00000573332 GOLGA8BA8MQT2 603 aa20.04■□□□□ 0.8
LITAF-212ENST00000573332 PLEKHA8P1O95397 391 aa20.04■□□□□ 0.8
LITAF-212ENST00000573332 ALAS1P13196 640 aa20.04■□□□□ 0.8
LITAF-212ENST00000573332 ADORA2AP29274 412 aa20.04■□□□□ 0.8
LITAF-212ENST00000573332 PDIA3P30101 505 aaKnown RBP20.04■□□□□ 0.8
LITAF-212ENST00000573332 TRAF1Q13077 416 aa20.04■□□□□ 0.8
LITAF-212ENST00000573332 ANKRD1Q15327 319 aa20.04■□□□□ 0.8
LITAF-212ENST00000573332 RTN1Q16799 776 aa20.04■□□□□ 0.8
LITAF-212ENST00000573332 RAB11FIP4Q86YS3 637 aa20.04■□□□□ 0.8
LITAF-212ENST00000573332 CCDC144CPQ8IYA2 1237 aa20.04■□□□□ 0.8
LITAF-212ENST00000573332 TRMT44Q8IYL2 757 aaKnown RBP20.04■□□□□ 0.8
LITAF-212ENST00000573332 MMP19Q99542 508 aa20.04■□□□□ 0.8
LITAF-212ENST00000573332 PNMA6FA0A0J9YX94 578 aa20.03■□□□□ 0.8
LITAF-212ENST00000573332 GRK4P32298 578 aa20.03■□□□□ 0.8
LITAF-212ENST00000573332 SLC4A3P48751 1232 aa20.03■□□□□ 0.8
LITAF-212ENST00000573332 METAP2P50579 478 aaKnown RBP eCLIP20.03■□□□□ 0.8
LITAF-212ENST00000573332 FBXO11Q86XK2 927 aa20.03■□□□□ 0.8
LITAF-212ENST00000573332 SLAIN1Q8ND83 568 aa20.03■□□□□ 0.8
LITAF-212ENST00000573332 IL27Q8NEV9 243 aa20.03■□□□□ 0.8
LITAF-212ENST00000573332 PIGSQ96S52 555 aa20.03■□□□□ 0.8
LITAF-212ENST00000573332 APBA2Q99767 749 aa20.03■□□□□ 0.8
LITAF-212ENST00000573332 AMNQ9BXJ7 453 aa20.03■□□□□ 0.8
LITAF-212ENST00000573332 SLC5A4Q9NY91 659 aa20.03■□□□□ 0.8
LITAF-212ENST00000573332 DIS3Q9Y2L1 958 aaKnown RBP20.03■□□□□ 0.8
LITAF-212ENST00000573332 ZNF236Q9UL36 1845 aa20.02■□□□□ 0.8
LITAF-212ENST00000573332 DNAJC25-GNG10A0A024R161 153 aa20.02■□□□□ 0.8
LITAF-212ENST00000573332 ADCY3O60266 1144 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms