RNA–Protein interactions for RNA: ENST00000572949.5

USP6-204, Transcript of ubiquitin specific peptidase 6, humanhuman

TSL 2

Gene USP6, Length 7,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-204ENST00000572949 DDX21Q9NR30 783 aaKnown RBP eCLIP10.37□□□□□ -0.75
USP6-204ENST00000572949 SUCLA2Q9P2R7 463 aaPredicted RBP10.37□□□□□ -0.75
USP6-204ENST00000572949 SUFUQ9UMX1 484 aa10.37□□□□□ -0.75
USP6-204ENST00000572949 A0A1B0GVL5 298 aa10.36□□□□□ -0.75
USP6-204ENST00000572949 SMIM24O75264 130 aa10.36□□□□□ -0.75
USP6-204ENST00000572949 GNAT1P11488 350 aa10.36□□□□□ -0.75
USP6-204ENST00000572949 PDE1CQ14123 709 aaPredicted RBP10.36□□□□□ -0.75
USP6-204ENST00000572949 TTBK2Q6IQ55 1244 aa10.36□□□□□ -0.75
USP6-204ENST00000572949 CDC26Q8NHZ8 85 aa10.36□□□□□ -0.75
USP6-204ENST00000572949 A1BGP04217 495 aa10.36□□□□□ -0.75
USP6-204ENST00000572949 STAT1P42224 750 aa10.36□□□□□ -0.75
USP6-204ENST00000572949 CROCCP2Q86T23 111 aa10.36□□□□□ -0.75
USP6-204ENST00000572949 MAD1L1Q9Y6D9 718 aa10.36□□□□□ -0.75
USP6-204ENST00000572949 VSIG1Q86XK7 387 aa10.36□□□□□ -0.75
USP6-204ENST00000572949 SLC7A3Q8WY07 619 aa10.36□□□□□ -0.75
USP6-204ENST00000572949 SUDS3Q9H7L9 328 aaPredicted RBP10.36□□□□□ -0.75
USP6-204ENST00000572949 FARP1Q9Y4F1 1045 aaPredicted RBP10.36□□□□□ -0.75
USP6-204ENST00000572949 TMEM247A6NEH6 219 aa10.36□□□□□ -0.75
USP6-204ENST00000572949 CCDC93Q567U6 631 aa10.36□□□□□ -0.75
USP6-204ENST00000572949 KAZNQ674X7 775 aa10.36□□□□□ -0.75
USP6-204ENST00000572949 PLA2G4DQ86XP0 818 aa10.36□□□□□ -0.75
USP6-204ENST00000572949 FAM71BQ8TC56 605 aa10.36□□□□□ -0.75
USP6-204ENST00000572949 CDKL2Q92772 493 aa10.36□□□□□ -0.75
USP6-204ENST00000572949 PPP1R12CQ9BZL4 782 aa10.36□□□□□ -0.75
USP6-204ENST00000572949 MTIF3Q9H2K0 278 aaKnown RBP10.36□□□□□ -0.75
USP6-204ENST00000572949 LRRC4Q9HBW1 653 aa10.36□□□□□ -0.75
USP6-204ENST00000572949 ORC6Q9Y5N6 252 aa10.36□□□□□ -0.75
USP6-204ENST00000572949 SUGT1Q9Y2Z0 365 aa10.36□□□□□ -0.75
USP6-204ENST00000572949 CCND2P30279 289 aa10.36□□□□□ -0.75
USP6-204ENST00000572949 PTK2BQ14289 1009 aa10.36□□□□□ -0.75
USP6-204ENST00000572949 ZSCAN23Q3MJ62 389 aa10.36□□□□□ -0.75
USP6-204ENST00000572949 C7orf31Q8N865 590 aa10.36□□□□□ -0.75
USP6-204ENST00000572949 SLC4A7Q9Y6M7 1214 aa10.36□□□□□ -0.75
USP6-204ENST00000572949 NPATQ14207 1427 aa10.35□□□□□ -0.75
USP6-204ENST00000572949 H7C0C1 242 aa10.35□□□□□ -0.75
USP6-204ENST00000572949 TUBB4AP04350 444 aa10.35□□□□□ -0.75
USP6-204ENST00000572949 ATP5OP48047 213 aa10.35□□□□□ -0.75
USP6-204ENST00000572949 MAP3K21Q5TCX8 1036 aa10.35□□□□□ -0.75
USP6-204ENST00000572949 LZICQ8WZA0 190 aa10.35□□□□□ -0.75
USP6-204ENST00000572949 POLKQ9UBT6 870 aa10.35□□□□□ -0.75
USP6-204ENST00000572949 SOX5P35711 763 aa10.35□□□□□ -0.75
USP6-204ENST00000572949 TYRO3Q06418 890 aa10.35□□□□□ -0.75
USP6-204ENST00000572949 CCDC186Q7Z3E2 898 aa10.35□□□□□ -0.75
USP6-204ENST00000572949 PGBD3Q8N328 593 aa10.35□□□□□ -0.75
USP6-204ENST00000572949 URGCPQ8TCY9 931 aa10.35□□□□□ -0.75
USP6-204ENST00000572949 MYL5Q02045 173 aa10.35□□□□□ -0.75
USP6-204ENST00000572949 PPP2R5BQ15173 497 aa10.35□□□□□ -0.75
USP6-204ENST00000572949 ATL3Q6DD88 541 aa10.35□□□□□ -0.75
USP6-204ENST00000572949 PMLP29590 882 aa10.35□□□□□ -0.75
USP6-204ENST00000572949 HOXC9P31274 260 aa10.35□□□□□ -0.75
USP6-204ENST00000572949 MYO1EQ12965 1108 aa10.35□□□□□ -0.75
USP6-204ENST00000572949 MAP7D3Q8IWC1 876 aa10.35□□□□□ -0.75
USP6-204ENST00000572949 CCDC127Q96BQ5 260 aa10.35□□□□□ -0.75
USP6-204ENST00000572949 DDX25Q9UHL0 483 aaKnown RBP10.35□□□□□ -0.75
USP6-204ENST00000572949 KCNH4Q9UQ05 1017 aa10.35□□□□□ -0.75
USP6-204ENST00000572949 DENND3A2RUS2 1198 aa10.35□□□□□ -0.75
USP6-204ENST00000572949 TMEM232C9JQI7 657 aa10.35□□□□□ -0.75
USP6-204ENST00000572949 DSTYKQ6XUX3 929 aa10.35□□□□□ -0.75
USP6-204ENST00000572949 THEM5Q8N1Q8 247 aa10.35□□□□□ -0.75
USP6-204ENST00000572949 ARHGAP45Q92619 1136 aa10.35□□□□□ -0.75
USP6-204ENST00000572949 RSRC1Q96IZ7 334 aaKnown RBP10.35□□□□□ -0.75
USP6-204ENST00000572949 KCNH3Q9ULD8 1083 aa10.35□□□□□ -0.75
USP6-204ENST00000572949 PCDHB4Q9Y5E5 795 aa10.35□□□□□ -0.75
USP6-204ENST00000572949 ZNF532Q9HCE3 1301 aa10.35□□□□□ -0.75
USP6-204ENST00000572949 TUBBP07437 444 aa10.35□□□□□ -0.75
USP6-204ENST00000572949 EEPD1Q7L9B9 569 aa10.35□□□□□ -0.75
USP6-204ENST00000572949 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.35□□□□□ -0.75
USP6-204ENST00000572949 ATP6V0A1Q93050 837 aa10.35□□□□□ -0.75
USP6-204ENST00000572949 IFT122Q9HBG6 1241 aa10.35□□□□□ -0.75
USP6-204ENST00000572949 CUL7Q14999 1698 aa10.34□□□□□ -0.75
USP6-204ENST00000572949 ANKRD44Q8N8A2 993 aa10.34□□□□□ -0.75
USP6-204ENST00000572949 GRK7Q8WTQ7 553 aa10.34□□□□□ -0.75
USP6-204ENST00000572949 UBE2Q2Q8WVN8 375 aa10.34□□□□□ -0.75
USP6-204ENST00000572949 AMFRQ9UKV5 643 aa10.34□□□□□ -0.75
USP6-204ENST00000572949 GNGT2O14610 69 aa10.34□□□□□ -0.75
USP6-204ENST00000572949 ABCB4P21439 1286 aa10.34□□□□□ -0.75
USP6-204ENST00000572949 RPS6KA1Q15418 735 aa10.34□□□□□ -0.75
USP6-204ENST00000572949 KRT222Q8N1A0 295 aa10.34□□□□□ -0.75
USP6-204ENST00000572949 SEPT8Q92599 483 aa10.34□□□□□ -0.75
USP6-204ENST00000572949 AK2P54819 239 aa10.34□□□□□ -0.75
USP6-204ENST00000572949 PHEXP78562 749 aa10.34□□□□□ -0.75
USP6-204ENST00000572949 TNNI3KQ59H18 835 aa10.34□□□□□ -0.75
USP6-204ENST00000572949 ANGPTL8Q6UXH0 198 aa10.34□□□□□ -0.75
USP6-204ENST00000572949 KRT27Q7Z3Y8 459 aa10.34□□□□□ -0.75
USP6-204ENST00000572949 NBPF11Q86T75 865 aa10.34□□□□□ -0.75
USP6-204ENST00000572949 SMC5Q8IY18 1101 aa10.34□□□□□ -0.75
USP6-204ENST00000572949 SPICE1Q8N0Z3 855 aa10.34□□□□□ -0.75
USP6-204ENST00000572949 CCNYQ8ND76 341 aa10.34□□□□□ -0.75
USP6-204ENST00000572949 SPDL1Q96EA4 605 aa10.34□□□□□ -0.75
USP6-204ENST00000572949 MAGED2Q9UNF1 606 aaPredicted RBP10.34□□□□□ -0.75
USP6-204ENST00000572949 FPGT-TNNI3KV9GXZ4 949 aa10.34□□□□□ -0.75
USP6-204ENST00000572949 IFNA8P32881 189 aa10.34□□□□□ -0.75
USP6-204ENST00000572949 TAF11Q15544 211 aa10.34□□□□□ -0.75
USP6-204ENST00000572949 RAET1EQ8TD07 263 aa10.34□□□□□ -0.75
USP6-204ENST00000572949 LRGUKQ96M69 825 aa10.34□□□□□ -0.75
USP6-204ENST00000572949 DOLKQ9UPQ8 538 aa10.34□□□□□ -0.75
USP6-204ENST00000572949 HNRNPDLO14979 420 aaKnown RBP10.34□□□□□ -0.75
USP6-204ENST00000572949 KLHL7Q8IXQ5 586 aa10.34□□□□□ -0.75
USP6-204ENST00000572949 PPM1KQ8N3J5 372 aa10.34□□□□□ -0.75
USP6-204ENST00000572949 C8orf58Q8NAV2 365 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms