RNA–Protein interactions for RNA: ENST00000571995.5

RAB40B-206, Transcript of RAB40B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40B, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-206ENST00000571995 RAB34Q9BZG1 259 aa18.18■□□□□ 0.5
RAB40B-206ENST00000571995 PPIP5K2O43314 1243 aa18.18■□□□□ 0.5
RAB40B-206ENST00000571995 SLC30A10Q6XR72 485 aa18.18■□□□□ 0.5
RAB40B-206ENST00000571995 PCDHA4Q9UN74 947 aa18.18■□□□□ 0.5
RAB40B-206ENST00000571995 PRCPP42785 496 aa18.17■□□□□ 0.5
RAB40B-206ENST00000571995 PRR16Q569H4 304 aa18.17■□□□□ 0.5
RAB40B-206ENST00000571995 C12orf60Q5U649 245 aa18.17■□□□□ 0.5
RAB40B-206ENST00000571995 TYW1BQ6NUM6 668 aa18.17■□□□□ 0.5
RAB40B-206ENST00000571995 RDH13Q8NBN7 331 aa18.17■□□□□ 0.5
RAB40B-206ENST00000571995 TEKT1Q969V4 418 aa18.17■□□□□ 0.5
RAB40B-206ENST00000571995 PHF20Q9BVI0 1012 aa18.17■□□□□ 0.5
RAB40B-206ENST00000571995 TDRD3Q9H7E2 651 aaKnown RBP18.17■□□□□ 0.5
RAB40B-206ENST00000571995 LRRC4BQ9NT99 713 aa18.17■□□□□ 0.5
RAB40B-206ENST00000571995 LEMD3Q9Y2U8 911 aa18.17■□□□□ 0.5
RAB40B-206ENST00000571995 MRC1P22897 1456 aa18.17■□□□□ 0.5
RAB40B-206ENST00000571995 ADCY7P51828 1080 aa18.17■□□□□ 0.5
RAB40B-206ENST00000571995 KRT31Q15323 416 aa18.17■□□□□ 0.5
RAB40B-206ENST00000571995 SPA17Q15506 151 aa18.17■□□□□ 0.5
RAB40B-206ENST00000571995 CCDC122Q5T0U0 273 aa18.17■□□□□ 0.5
RAB40B-206ENST00000571995 OGFOD1Q8N543 542 aa18.17■□□□□ 0.5
RAB40B-206ENST00000571995 ZNF397Q8NF99 534 aaPredicted RBP18.17■□□□□ 0.5
RAB40B-206ENST00000571995 PKNOX2Q96KN3 472 aa18.17■□□□□ 0.5
RAB40B-206ENST00000571995 RMND1Q9NWS8 449 aa18.17■□□□□ 0.5
RAB40B-206ENST00000571995 TRPC5Q9UL62 973 aaPredicted RBP18.17■□□□□ 0.5
RAB40B-206ENST00000571995 PCDHAC2Q9Y5I4 1007 aa18.17■□□□□ 0.5
RAB40B-206ENST00000571995 PFKFB3Q16875 520 aaPredicted RBP18.17■□□□□ 0.5
RAB40B-206ENST00000571995 TXNRD1Q16881 649 aa18.17■□□□□ 0.5
RAB40B-206ENST00000571995 HERC4Q5GLZ8 1057 aaPredicted RBP18.17■□□□□ 0.5
RAB40B-206ENST00000571995 KIFC2Q96AC6 838 aa18.17■□□□□ 0.5
RAB40B-206ENST00000571995 SERPINB13Q9UIV8 391 aa18.17■□□□□ 0.5
RAB40B-206ENST00000571995 FCER1AP12319 257 aa18.16■□□□□ 0.5
RAB40B-206ENST00000571995 ATP2B4P23634 1241 aa18.16■□□□□ 0.5
RAB40B-206ENST00000571995 DCAF17Q5H9S7 520 aaPredicted RBP18.16■□□□□ 0.5
RAB40B-206ENST00000571995 CCDC181Q5TID7 509 aa18.16■□□□□ 0.5
RAB40B-206ENST00000571995 ACTN4O43707 911 aaKnown RBP18.16■□□□□ 0.5
RAB40B-206ENST00000571995 C21orf2O43822 256 aa18.16■□□□□ 0.5
RAB40B-206ENST00000571995 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.16■□□□□ 0.5
RAB40B-206ENST00000571995 POLLQ9UGP5 575 aa18.16■□□□□ 0.5
RAB40B-206ENST00000571995 KDM3BQ7LBC6 1761 aa18.16■□□□□ 0.5
RAB40B-206ENST00000571995 C5P01031 1676 aa18.16■□□□□ 0.5
RAB40B-206ENST00000571995 AFDNP55196 1824 aaKnown RBP18.16■□□□□ 0.5
RAB40B-206ENST00000571995 SPDYE3A6NKU9 549 aa18.16■□□□□ 0.5
RAB40B-206ENST00000571995 H0YIN7 160 aa18.16■□□□□ 0.5
RAB40B-206ENST00000571995 TDP2O95551 362 aa18.16■□□□□ 0.5
RAB40B-206ENST00000571995 SV2BQ7L1I2 683 aa18.16■□□□□ 0.5
RAB40B-206ENST00000571995 TUBE1Q9UJT0 475 aa18.16■□□□□ 0.5
RAB40B-206ENST00000571995 HPSEQ9Y251 543 aa18.16■□□□□ 0.5
RAB40B-206ENST00000571995 PCDHA1Q9Y5I3 950 aa18.16■□□□□ 0.5
RAB40B-206ENST00000571995 CNTNAP5Q8WYK1 1306 aa18.15■□□□□ 0.5
RAB40B-206ENST00000571995 LARGE2Q8N3Y3 721 aa18.15■□□□□ 0.5
RAB40B-206ENST00000571995 CTAGE1Q96RT6 745 aa18.15■□□□□ 0.5
RAB40B-206ENST00000571995 RABEP2Q9H5N1 569 aa18.15■□□□□ 0.5
RAB40B-206ENST00000571995 IL17RBQ9NRM6 502 aa18.15■□□□□ 0.5
RAB40B-206ENST00000571995 GJA3Q9Y6H8 435 aa18.15■□□□□ 0.5
RAB40B-206ENST00000571995 WDR19Q8NEZ3 1342 aa18.15■□□□□ 0.5
RAB40B-206ENST00000571995 OR52Z1P0C646 297 aa18.15■□□□□ 0.5
RAB40B-206ENST00000571995 COPB1P53618 953 aaKnown RBP18.15■□□□□ 0.5
RAB40B-206ENST00000571995 AMPD3Q01432 767 aa18.15■□□□□ 0.5
RAB40B-206ENST00000571995 KMT5BQ4FZB7 885 aa18.15■□□□□ 0.5
RAB40B-206ENST00000571995 WDR78Q5VTH9 848 aa18.15■□□□□ 0.5
RAB40B-206ENST00000571995 TAF3Q5VWG9 929 aa18.15■□□□□ 0.5
RAB40B-206ENST00000571995 NEK8Q86SG6 692 aa18.15■□□□□ 0.5
RAB40B-206ENST00000571995 POTEDQ86YR6 584 aa18.15■□□□□ 0.5
RAB40B-206ENST00000571995 ENOX1Q8TC92 643 aaKnown RBP18.15■□□□□ 0.5
RAB40B-206ENST00000571995 LMO7Q8WWI1 1683 aa18.15■□□□□ 0.5
RAB40B-206ENST00000571995 GYS2P54840 703 aa18.15■□□□□ 0.5
RAB40B-206ENST00000571995 TBC1D16Q8TBP0 767 aa18.15■□□□□ 0.5
RAB40B-206ENST00000571995 PSTPIP2Q9H939 334 aa18.15■□□□□ 0.5
RAB40B-206ENST00000571995 TRIM10Q9UDY6 481 aa18.15■□□□□ 0.5
RAB40B-206ENST00000571995 USP17L10C9JJH3 530 aa18.14■□□□□ 0.49
RAB40B-206ENST00000571995 NFIAQ12857 509 aa18.14■□□□□ 0.49
RAB40B-206ENST00000571995 STK36Q9NRP7 1315 aa18.14■□□□□ 0.49
RAB40B-206ENST00000571995 FXR1P51114 621 aaKnown RBP eCLIP18.14■□□□□ 0.49
RAB40B-206ENST00000571995 SYCP1Q15431 976 aa18.14■□□□□ 0.49
RAB40B-206ENST00000571995 GOLGA6L1Q8N7Z2 621 aa18.14■□□□□ 0.49
RAB40B-206ENST00000571995 SH2D3AQ9BRG2 576 aa18.14■□□□□ 0.49
RAB40B-206ENST00000571995 NOP2P46087 812 aaKnown RBP18.14■□□□□ 0.49
RAB40B-206ENST00000571995 CERKLQ49MI3 558 aaPredicted RBP18.14■□□□□ 0.49
RAB40B-206ENST00000571995 KRT222Q8N1A0 295 aa18.14■□□□□ 0.49
RAB40B-206ENST00000571995 SLC35F6Q8N357 371 aa18.14■□□□□ 0.49
RAB40B-206ENST00000571995 SFI1A8K8P3 1242 aa18.13■□□□□ 0.49
RAB40B-206ENST00000571995 OSBPL5Q9H0X9 879 aaPredicted RBP18.13■□□□□ 0.49
RAB40B-206ENST00000571995 CTAGE9A4FU28 777 aa18.13■□□□□ 0.49
RAB40B-206ENST00000571995 PPP2R5BQ15173 497 aa18.13■□□□□ 0.49
RAB40B-206ENST00000571995 HSP90B2PQ58FF3 399 aa18.13■□□□□ 0.49
RAB40B-206ENST00000571995 CCDC42Q96M95 316 aa18.13■□□□□ 0.49
RAB40B-206ENST00000571995 GTPBP6O43824 516 aaPredicted RBP18.13■□□□□ 0.49
RAB40B-206ENST00000571995 KCTD19Q17RG1 926 aaPredicted RBP18.13■□□□□ 0.49
RAB40B-206ENST00000571995 ZFYVE27Q5T4F4 411 aa18.13■□□□□ 0.49
RAB40B-206ENST00000571995 MRPL44Q9H9J2 332 aaKnown RBP18.13■□□□□ 0.49
RAB40B-206ENST00000571995 BCS1LQ9Y276 419 aa18.13■□□□□ 0.49
RAB40B-206ENST00000571995 RASA1P20936 1047 aa18.12■□□□□ 0.49
RAB40B-206ENST00000571995 KLK7P49862 253 aa18.12■□□□□ 0.49
RAB40B-206ENST00000571995 AOC3Q16853 763 aa18.12■□□□□ 0.49
RAB40B-206ENST00000571995 CNGA4Q8IV77 575 aa18.12■□□□□ 0.49
RAB40B-206ENST00000571995 SMCR8Q8TEV9 937 aaPredicted RBP18.12■□□□□ 0.49
RAB40B-206ENST00000571995 GSDMAQ96QA5 445 aa18.12■□□□□ 0.49
RAB40B-206ENST00000571995 CHP1Q99653 195 aa18.12■□□□□ 0.49
RAB40B-206ENST00000571995 MRPL12P52815 198 aaKnown RBP18.12■□□□□ 0.49
RAB40B-206ENST00000571995 VPS72Q15906 364 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms