RNA–Protein interactions for RNA: ENST00000571958.1

PRPF8-203, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 3

Gene PRPF8, Length 380 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-203ENST00000571958 PRDM6Q9NQX0 595 aa11.98□□□□□ -0.49
PRPF8-203ENST00000571958 CTDP1Q9Y5B0 961 aaPredicted RBP11.98□□□□□ -0.49
PRPF8-203ENST00000571958 A0A0U1RQG5 324 aaPredicted RBP11.97□□□□□ -0.49
PRPF8-203ENST00000571958 ACRP10323 421 aa11.97□□□□□ -0.49
PRPF8-203ENST00000571958 GJA9P57773 515 aa11.97□□□□□ -0.49
PRPF8-203ENST00000571958 CNTN2Q02246 1040 aa11.97□□□□□ -0.49
PRPF8-203ENST00000571958 PPIGQ13427 754 aaKnown RBP eCLIP11.97□□□□□ -0.49
PRPF8-203ENST00000571958 GNASQ5JWF2 1037 aa11.97□□□□□ -0.49
PRPF8-203ENST00000571958 TMEM240Q5SV17 173 aa11.97□□□□□ -0.49
PRPF8-203ENST00000571958 TSHZ3Q63HK5 1081 aa11.97□□□□□ -0.49
PRPF8-203ENST00000571958 GIMAP6Q6P9H5 292 aa11.97□□□□□ -0.49
PRPF8-203ENST00000571958 ARMCX2Q7L311 632 aa11.97□□□□□ -0.49
PRPF8-203ENST00000571958 FAM126BQ8IXS8 530 aa11.97□□□□□ -0.49
PRPF8-203ENST00000571958 CCDC144CPQ8IYA2 1237 aa11.97□□□□□ -0.49
PRPF8-203ENST00000571958 KBTBD3Q8NAB2 608 aa11.97□□□□□ -0.49
PRPF8-203ENST00000571958 APPBP2Q92624 585 aa11.97□□□□□ -0.49
PRPF8-203ENST00000571958 SYMPKQ92797 1274 aaKnown RBP11.97□□□□□ -0.49
PRPF8-203ENST00000571958 VTI1AQ96AJ9 217 aa11.97□□□□□ -0.49
PRPF8-203ENST00000571958 PBX4Q9BYU1 374 aa11.97□□□□□ -0.49
PRPF8-203ENST00000571958 KATNBL1Q9H079 304 aa11.97□□□□□ -0.49
PRPF8-203ENST00000571958 SPC25Q9HBM1 224 aa11.97□□□□□ -0.49
PRPF8-203ENST00000571958 HOMER2Q9NSB8 354 aa11.97□□□□□ -0.49
PRPF8-203ENST00000571958 ECHDC1Q9NTX5 307 aa11.97□□□□□ -0.49
PRPF8-203ENST00000571958 LCTP09848 1927 aa11.97□□□□□ -0.49
PRPF8-203ENST00000571958 MUC3AQ02505 3323 aa11.96□□□□□ -0.49
PRPF8-203ENST00000571958 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.96□□□□□ -0.49
PRPF8-203ENST00000571958 M0R2C6 588 aa11.96□□□□□ -0.49
PRPF8-203ENST00000571958 ARVCFO00192 962 aa11.96□□□□□ -0.49
PRPF8-203ENST00000571958 CTAGE5O15320 804 aa11.96□□□□□ -0.49
PRPF8-203ENST00000571958 GPAA1O43292 621 aa11.96□□□□□ -0.49
PRPF8-203ENST00000571958 TDO2P48775 406 aa11.96□□□□□ -0.49
PRPF8-203ENST00000571958 BEX3Q00994 111 aa11.96□□□□□ -0.49
PRPF8-203ENST00000571958 TJAP1Q5JTD0 557 aa11.96□□□□□ -0.49
PRPF8-203ENST00000571958 RASIP1Q5U651 963 aa11.96□□□□□ -0.49
PRPF8-203ENST00000571958 CCDC129Q6ZRS4 1044 aa11.96□□□□□ -0.49
PRPF8-203ENST00000571958 ZNF444Q8N0Y2 327 aaPredicted RBP11.96□□□□□ -0.49
PRPF8-203ENST00000571958 CHST13Q8NET6 341 aa11.96□□□□□ -0.49
PRPF8-203ENST00000571958 MKL1Q969V6 931 aa11.96□□□□□ -0.49
PRPF8-203ENST00000571958 MTMR4Q9NYA4 1195 aa11.96□□□□□ -0.49
PRPF8-203ENST00000571958 FBXO40Q9UH90 709 aa11.96□□□□□ -0.49
PRPF8-203ENST00000571958 FEM1BQ9UK73 627 aa11.96□□□□□ -0.49
PRPF8-203ENST00000571958 ASTN1O14525 1302 aa11.95□□□□□ -0.5
PRPF8-203ENST00000571958 TLR3O15455 904 aaKnown RBP11.95□□□□□ -0.5
PRPF8-203ENST00000571958 RNF113AO15541 343 aaKnown RBP11.95□□□□□ -0.5
PRPF8-203ENST00000571958 TTLL1O95922 423 aa11.95□□□□□ -0.5
PRPF8-203ENST00000571958 APPP05067 770 aa11.95□□□□□ -0.5
PRPF8-203ENST00000571958 BMP3P12645 472 aa11.95□□□□□ -0.5
PRPF8-203ENST00000571958 PTGS1P23219 599 aa11.95□□□□□ -0.5
PRPF8-203ENST00000571958 OAZ1P54368 228 aa11.95□□□□□ -0.5
PRPF8-203ENST00000571958 C20orf194Q5TEA3 1177 aa11.95□□□□□ -0.5
PRPF8-203ENST00000571958 SLFN13Q68D06 897 aa11.95□□□□□ -0.5
PRPF8-203ENST00000571958 PSRC1Q6PGN9 363 aaPredicted RBP11.95□□□□□ -0.5
PRPF8-203ENST00000571958 CCDC174Q6PII3 467 aa11.95□□□□□ -0.5
PRPF8-203ENST00000571958 ZNF365Q70YC5 407 aa11.95□□□□□ -0.5
PRPF8-203ENST00000571958 TMEM199Q8N511 208 aa11.95□□□□□ -0.5
PRPF8-203ENST00000571958 GMCL1P1Q8NEA9 526 aa11.95□□□□□ -0.5
PRPF8-203ENST00000571958 PPM1EQ8WY54 764 aa11.95□□□□□ -0.5
PRPF8-203ENST00000571958 CHMP4CQ96CF2 233 aa11.95□□□□□ -0.5
PRPF8-203ENST00000571958 CHMP4BQ9H444 224 aaKnown RBP11.95□□□□□ -0.5
PRPF8-203ENST00000571958 PRDM12Q9H4Q4 367 aa11.95□□□□□ -0.5
PRPF8-203ENST00000571958 ISY1Q9ULR0 285 aaKnown RBP11.95□□□□□ -0.5
PRPF8-203ENST00000571958 DDX49Q9Y6V7 483 aaKnown RBP11.95□□□□□ -0.5
PRPF8-203ENST00000571958 PLIN4Q96Q06 1357 aa11.94□□□□□ -0.5
PRPF8-203ENST00000571958 ZNF536O15090 1300 aa11.94□□□□□ -0.5
PRPF8-203ENST00000571958 UMODL1Q5DID0 1318 aa11.94□□□□□ -0.5
PRPF8-203ENST00000571958 MYO9BQ13459 2157 aa11.94□□□□□ -0.5
PRPF8-203ENST00000571958 SOWAHBA6NEL2 793 aa11.94□□□□□ -0.5
PRPF8-203ENST00000571958 TMEM232C9JQI7 657 aa11.94□□□□□ -0.5
PRPF8-203ENST00000571958 CD4P01730 458 aa11.94□□□□□ -0.5
PRPF8-203ENST00000571958 GNAT2P19087 354 aa11.94□□□□□ -0.5
PRPF8-203ENST00000571958 CYP2C18P33260 490 aa11.94□□□□□ -0.5
PRPF8-203ENST00000571958 TNFAIP2Q03169 654 aa11.94□□□□□ -0.5
PRPF8-203ENST00000571958 CXCL17Q6UXB2 119 aa11.94□□□□□ -0.5
PRPF8-203ENST00000571958 IFNL3Q8IZI9 196 aa11.94□□□□□ -0.5
PRPF8-203ENST00000571958 FAM133AQ8N9E0 248 aa11.94□□□□□ -0.5
PRPF8-203ENST00000571958 AGBL1Q96MI9 1066 aa11.94□□□□□ -0.5
PRPF8-203ENST00000571958 GAS2L1Q99501 681 aaPredicted RBP11.94□□□□□ -0.5
PRPF8-203ENST00000571958 ACAD9Q9H845 621 aa11.94□□□□□ -0.5
PRPF8-203ENST00000571958 ZNF287Q9HBT7 754 aa11.94□□□□□ -0.5
PRPF8-203ENST00000571958 A1CFQ9NQ94 594 aaKnown RBP11.94□□□□□ -0.5
PRPF8-203ENST00000571958 CXXC1Q9P0U4 656 aaPredicted RBP11.94□□□□□ -0.5
PRPF8-203ENST00000571958 SYNPO2Q9UMS6 1093 aa11.94□□□□□ -0.5
PRPF8-203ENST00000571958 CHD7Q9P2D1 2997 aa11.93□□□□□ -0.5
PRPF8-203ENST00000571958 ZFYP08048 801 aaPredicted RBP11.93□□□□□ -0.5
PRPF8-203ENST00000571958 TSPY3P0CV98 308 aa11.93□□□□□ -0.5
PRPF8-203ENST00000571958 TSPY8P0CW00 308 aa11.93□□□□□ -0.5
PRPF8-203ENST00000571958 STAT2P52630 851 aa11.93□□□□□ -0.5
PRPF8-203ENST00000571958 NKX3-2P78367 333 aa11.93□□□□□ -0.5
PRPF8-203ENST00000571958 NOL8Q76FK4 1167 aaKnown RBP11.93□□□□□ -0.5
PRPF8-203ENST00000571958 TLK2Q86UE8 772 aa11.93□□□□□ -0.5
PRPF8-203ENST00000571958 SLC43A3Q8NBI5 491 aa11.93□□□□□ -0.5
PRPF8-203ENST00000571958 NEDD1Q8NHV4 660 aa11.93□□□□□ -0.5
PRPF8-203ENST00000571958 GPATCH3Q96I76 525 aa11.93□□□□□ -0.5
PRPF8-203ENST00000571958 SEC62Q99442 399 aaKnown RBP11.93□□□□□ -0.5
PRPF8-203ENST00000571958 IL23AQ9NPF7 189 aa11.93□□□□□ -0.5
PRPF8-203ENST00000571958 RNF146Q9NTX7 359 aa11.93□□□□□ -0.5
PRPF8-203ENST00000571958 GNEQ9Y223 722 aaKnown RBP11.93□□□□□ -0.5
PRPF8-203ENST00000571958 REV3LO60673 3130 aa11.93□□□□□ -0.5
PRPF8-203ENST00000571958 GRIN2DO15399 1336 aa11.92□□□□□ -0.5
PRPF8-203ENST00000571958 PATL2C9JE40 543 aaKnown RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms