RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 ARMC5Q96C12 935 aa8.17□□□□□ -1.1
SMG6-209ENST00000571442 ZNF333Q96JL9 665 aa8.17□□□□□ -1.1
SMG6-209ENST00000571442 TMEM87BQ96K49 555 aa8.17□□□□□ -1.1
SMG6-209ENST00000571442 FGD4Q96M96 766 aa8.17□□□□□ -1.1
SMG6-209ENST00000571442 PURBQ96QR8 312 aaKnown RBP8.17□□□□□ -1.1
SMG6-209ENST00000571442 LARP6Q9BRS8 491 aaKnown RBP8.17□□□□□ -1.1
SMG6-209ENST00000571442 UPF3BQ9BZI7 483 aaKnown RBP8.17□□□□□ -1.1
SMG6-209ENST00000571442 JMJD4Q9H9V9 463 aa8.17□□□□□ -1.1
SMG6-209ENST00000571442 FAM217BQ9NTX9 383 aaPredicted RBP8.17□□□□□ -1.1
SMG6-209ENST00000571442 DDX49Q9Y6V7 483 aaKnown RBP8.17□□□□□ -1.1
SMG6-209ENST00000571442 POTEFA5A3E0 1075 aa8.16□□□□□ -1.1
SMG6-209ENST00000571442 SLC15A5A6NIM6 579 aa8.16□□□□□ -1.1
SMG6-209ENST00000571442 NFIBO00712 420 aa8.16□□□□□ -1.1
SMG6-209ENST00000571442 ASTN1O14525 1302 aa8.16□□□□□ -1.1
SMG6-209ENST00000571442 EPB41L2O43491 1005 aaKnown RBP8.16□□□□□ -1.1
SMG6-209ENST00000571442 ADCY3O60266 1144 aa8.16□□□□□ -1.1
SMG6-209ENST00000571442 GNRH1P01148 92 aa8.16□□□□□ -1.1
SMG6-209ENST00000571442 ZKSCAN1P17029 563 aaPredicted RBP8.16□□□□□ -1.1
SMG6-209ENST00000571442 CASTP20810 708 aaKnown RBP8.16□□□□□ -1.1
SMG6-209ENST00000571442 HOXD10P28358 340 aa8.16□□□□□ -1.1
SMG6-209ENST00000571442 ADORA2AP29274 412 aa8.16□□□□□ -1.1
SMG6-209ENST00000571442 GRK4P32298 578 aa8.16□□□□□ -1.1
SMG6-209ENST00000571442 LIFRP42702 1097 aa8.16□□□□□ -1.1
SMG6-209ENST00000571442 CCNA1P78396 465 aa8.16□□□□□ -1.1
SMG6-209ENST00000571442 APOBRQ0VD83 1088 aa8.16□□□□□ -1.1
SMG6-209ENST00000571442 MAP2K5Q13163 448 aa8.16□□□□□ -1.1
SMG6-209ENST00000571442 TOB2Q14106 344 aaPredicted RBP8.16□□□□□ -1.1
SMG6-209ENST00000571442 CDC37Q16543 378 aaPredicted RBP8.16□□□□□ -1.1
SMG6-209ENST00000571442 QRICH1Q2TAL8 776 aa8.16□□□□□ -1.1
SMG6-209ENST00000571442 ASPRV1Q53RT3 343 aa8.16□□□□□ -1.1
SMG6-209ENST00000571442 GPATCH4Q5T3I0 446 aaKnown RBP8.16□□□□□ -1.1
SMG6-209ENST00000571442 Q6ZUG5 572 aa8.16□□□□□ -1.1
SMG6-209ENST00000571442 RBBP6Q7Z6E9 1792 aaKnown RBP8.16□□□□□ -1.1
SMG6-209ENST00000571442 SGMS1Q86VZ5 419 aa8.16□□□□□ -1.1
SMG6-209ENST00000571442 WDR19Q8NEZ3 1342 aa8.16□□□□□ -1.1
SMG6-209ENST00000571442 RAET1EQ8TD07 263 aa8.16□□□□□ -1.1
SMG6-209ENST00000571442 CLEC4DQ8WXI8 215 aa8.16□□□□□ -1.1
SMG6-209ENST00000571442 TBC1D5Q92609 795 aa8.16□□□□□ -1.1
SMG6-209ENST00000571442 MTMR8Q96EF0 704 aa8.16□□□□□ -1.1
SMG6-209ENST00000571442 NUDT12Q9BQG2 462 aa8.16□□□□□ -1.1
SMG6-209ENST00000571442 MTA3Q9BTC8 594 aa8.16□□□□□ -1.1
SMG6-209ENST00000571442 TEX13BQ9BXU2 312 aa8.16□□□□□ -1.1
SMG6-209ENST00000571442 AGXT2Q9BYV1 514 aa8.16□□□□□ -1.1
SMG6-209ENST00000571442 ZSWIM6Q9HCJ5 1215 aa8.16□□□□□ -1.1
SMG6-209ENST00000571442 VAT1LQ9HCJ6 419 aa8.16□□□□□ -1.1
SMG6-209ENST00000571442 HOMER2Q9NSB8 354 aa8.16□□□□□ -1.1
SMG6-209ENST00000571442 DNAJC25-GNG10A0A024R161 153 aa8.15□□□□□ -1.1
SMG6-209ENST00000571442 ERICH2A1L162 156 aa8.15□□□□□ -1.1
SMG6-209ENST00000571442 KLRF2D3W0D1 207 aa8.15□□□□□ -1.1
SMG6-209ENST00000571442 OPLAHO14841 1288 aa8.15□□□□□ -1.1
SMG6-209ENST00000571442 DTNBO60941 627 aa8.15□□□□□ -1.1
SMG6-209ENST00000571442 DDAH1O94760 285 aa8.15□□□□□ -1.1
SMG6-209ENST00000571442 SLC25A27O95847 323 aa8.15□□□□□ -1.1
SMG6-209ENST00000571442 INHAP05111 366 aa8.15□□□□□ -1.1
SMG6-209ENST00000571442 ICAM1P05362 532 aa8.15□□□□□ -1.1
SMG6-209ENST00000571442 ALAS1P13196 640 aa8.15□□□□□ -1.1
SMG6-209ENST00000571442 CDC27P30260 824 aa8.15□□□□□ -1.1
SMG6-209ENST00000571442 OAZ1P54368 228 aa8.15□□□□□ -1.1
SMG6-209ENST00000571442 PRMT2P55345 433 aa8.15□□□□□ -1.1
SMG6-209ENST00000571442 KRT32Q14532 448 aa8.15□□□□□ -1.1
SMG6-209ENST00000571442 SART3Q15020 963 aaKnown RBP8.15□□□□□ -1.1
SMG6-209ENST00000571442 ZNF792Q3KQV3 632 aa8.15□□□□□ -1.1
SMG6-209ENST00000571442 SLC9C1Q4G0N8 1177 aa8.15□□□□□ -1.1
SMG6-209ENST00000571442 PRPF38BQ5VTL8 546 aaKnown RBP8.15□□□□□ -1.1
SMG6-209ENST00000571442 APOA5Q6Q788 366 aa8.15□□□□□ -1.1
SMG6-209ENST00000571442 BLOC1S2Q6QNY1 142 aa8.15□□□□□ -1.1
SMG6-209ENST00000571442 NFXL1Q6ZNB6 911 aa8.15□□□□□ -1.1
SMG6-209ENST00000571442 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.15□□□□□ -1.1
SMG6-209ENST00000571442 MICU3Q86XE3 530 aa8.15□□□□□ -1.1
SMG6-209ENST00000571442 SRBD1Q8N5C6 995 aaKnown RBP8.15□□□□□ -1.1
SMG6-209ENST00000571442 TRPV1Q8NER1 839 aa8.15□□□□□ -1.1
SMG6-209ENST00000571442 SOCS4Q8WXH5 440 aa8.15□□□□□ -1.1
SMG6-209ENST00000571442 PIBF1Q8WXW3 757 aa8.15□□□□□ -1.1
SMG6-209ENST00000571442 BRF1Q92994 677 aa8.15□□□□□ -1.1
SMG6-209ENST00000571442 IL17RAQ96F46 866 aa8.15□□□□□ -1.1
SMG6-209ENST00000571442 TRERF1Q96PN7 1200 aa8.15□□□□□ -1.1
SMG6-209ENST00000571442 PIGSQ96S52 555 aa8.15□□□□□ -1.1
SMG6-209ENST00000571442 MMP19Q99542 508 aa8.15□□□□□ -1.1
SMG6-209ENST00000571442 KIF2CQ99661 725 aa8.15□□□□□ -1.1
SMG6-209ENST00000571442 UNC93B1Q9H1C4 597 aa8.15□□□□□ -1.1
SMG6-209ENST00000571442 MROH8Q9H579 483 aa8.15□□□□□ -1.1
SMG6-209ENST00000571442 RIOX1Q9H6W3 641 aa8.15□□□□□ -1.1
SMG6-209ENST00000571442 A1CFQ9NQ94 594 aaKnown RBP8.15□□□□□ -1.1
SMG6-209ENST00000571442 RNF146Q9NTX7 359 aa8.15□□□□□ -1.1
SMG6-209ENST00000571442 CCPG1Q9ULG6 757 aa8.15□□□□□ -1.1
SMG6-209ENST00000571442 FRMPD3Q5JV73 1810 aa8.15□□□□□ -1.11
SMG6-209ENST00000571442 LRRC37A2A6NM11 1700 aa8.15□□□□□ -1.11
SMG6-209ENST00000571442 CEP290O15078 2479 aa8.14□□□□□ -1.11
SMG6-209ENST00000571442 CNTNAP5Q8WYK1 1306 aa8.14□□□□□ -1.11
SMG6-209ENST00000571442 KLF18A0A0U1RQI7 1052 aa8.14□□□□□ -1.11
SMG6-209ENST00000571442 hCG_1642624A0A1W2PR95 340 aa8.14□□□□□ -1.11
SMG6-209ENST00000571442 SOWAHBA6NEL2 793 aa8.14□□□□□ -1.11
SMG6-209ENST00000571442 CCDC69A6NI79 296 aa8.14□□□□□ -1.11
SMG6-209ENST00000571442 HOXC6P09630 235 aa8.14□□□□□ -1.11
SMG6-209ENST00000571442 FCER1AP12319 257 aa8.14□□□□□ -1.11
SMG6-209ENST00000571442 CYP2C19P33261 490 aa8.14□□□□□ -1.11
SMG6-209ENST00000571442 RGS2P41220 211 aa8.14□□□□□ -1.11
SMG6-209ENST00000571442 CNTN2Q02246 1040 aa8.14□□□□□ -1.11
SMG6-209ENST00000571442 FUT2Q10981 343 aa8.14□□□□□ -1.11
SMG6-209ENST00000571442 ARHGEF6Q15052 776 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms