RNA–Protein interactions for RNA: ENST00000571409.1

CTDNEP1-206, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 741 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-206ENST00000571409 TTBK2Q6IQ55 1244 aa35.72■■■■□ 3.31
CTDNEP1-206ENST00000571409 ACAD9Q9H845 621 aa35.72■■■■□ 3.31
CTDNEP1-206ENST00000571409 RNF146Q9NTX7 359 aa35.72■■■■□ 3.31
CTDNEP1-206ENST00000571409 CNPY2Q9Y2B0 182 aa35.72■■■■□ 3.31
CTDNEP1-206ENST00000571409 IMMTQ16891 758 aaKnown RBP35.71■■■■□ 3.31
CTDNEP1-206ENST00000571409 ZKSCAN3Q9BRR0 538 aa35.71■■■■□ 3.31
CTDNEP1-206ENST00000571409 CTNNA3Q9UI47 895 aa35.71■■■■□ 3.31
CTDNEP1-206ENST00000571409 FRMPD2Q68DX3 1309 aaPredicted RBP35.71■■■■□ 3.31
CTDNEP1-206ENST00000571409 SYNGAP1Q96PV0 1343 aa35.71■■■■□ 3.31
CTDNEP1-206ENST00000571409 MYCNP04198 464 aaPredicted RBP35.7■■■■□ 3.31
CTDNEP1-206ENST00000571409 ZNF865P0CJ78 1059 aaPredicted RBP35.7■■■■□ 3.31
CTDNEP1-206ENST00000571409 TKFCQ3LXA3 575 aa35.7■■■■□ 3.31
CTDNEP1-206ENST00000571409 MAMDC4Q6UXC1 1216 aa35.7■■■■□ 3.31
CTDNEP1-206ENST00000571409 PRO3102Q9H379 93 aa35.7■■■■□ 3.31
CTDNEP1-206ENST00000571409 GPCPD1Q9NPB8 672 aa35.7■■■■□ 3.31
CTDNEP1-206ENST00000571409 KBTBD13C9JR72 458 aa35.69■■■■□ 3.3
CTDNEP1-206ENST00000571409 KDM4AO75164 1064 aa35.69■■■■□ 3.3
CTDNEP1-206ENST00000571409 PDHBP11177 359 aa35.69■■■■□ 3.3
CTDNEP1-206ENST00000571409 ALAS1P13196 640 aa35.69■■■■□ 3.3
CTDNEP1-206ENST00000571409 SLC16A2P36021 539 aa35.69■■■■□ 3.3
CTDNEP1-206ENST00000571409 NT5C2P49902 561 aa35.69■■■■□ 3.3
CTDNEP1-206ENST00000571409 ZNF467Q7Z7K2 595 aaPredicted RBP35.69■■■■□ 3.3
CTDNEP1-206ENST00000571409 TRERF1Q96PN7 1200 aa35.69■■■■□ 3.3
CTDNEP1-206ENST00000571409 SMCHD1A6NHR9 2005 aa35.68■■■■□ 3.3
CTDNEP1-206ENST00000571409 RAD50Q92878 1312 aa35.68■■■■□ 3.3
CTDNEP1-206ENST00000571409 RARBP10826 455 aa35.68■■■■□ 3.3
CTDNEP1-206ENST00000571409 SYN1P17600 705 aa35.68■■■■□ 3.3
CTDNEP1-206ENST00000571409 BTNL9Q6UXG8 535 aa35.68■■■■□ 3.3
CTDNEP1-206ENST00000571409 FGD4Q96M96 766 aa35.68■■■■□ 3.3
CTDNEP1-206ENST00000571409 SNAI1O95863 264 aaPredicted RBP35.67■■■■□ 3.3
CTDNEP1-206ENST00000571409 AKR1A1P14550 325 aa35.67■■■■□ 3.3
CTDNEP1-206ENST00000571409 LRRC41Q15345 812 aa35.67■■■■□ 3.3
CTDNEP1-206ENST00000571409 SYDE2Q5VT97 1194 aa35.67■■■■□ 3.3
CTDNEP1-206ENST00000571409 RANBP17Q9H2T7 1088 aaKnown RBP35.67■■■■□ 3.3
CTDNEP1-206ENST00000571409 XPNPEP3Q9NQH7 507 aa35.67■■■■□ 3.3
CTDNEP1-206ENST00000571409 B4E1Z4 1266 aa35.66■■■■□ 3.3
CTDNEP1-206ENST00000571409 FXR1P51114 621 aaKnown RBP eCLIP35.66■■■■□ 3.3
CTDNEP1-206ENST00000571409 ATN1P54259 1190 aaPredicted RBP35.66■■■■□ 3.3
CTDNEP1-206ENST00000571409 IQCA1Q86XH1 822 aa35.66■■■■□ 3.3
CTDNEP1-206ENST00000571409 DGKHQ86XP1 1220 aa35.66■■■■□ 3.3
CTDNEP1-206ENST00000571409 RUFY2Q8WXA3 655 aa35.66■■■■□ 3.3
CTDNEP1-206ENST00000571409 A1CFQ9NQ94 594 aaKnown RBP35.66■■■■□ 3.3
CTDNEP1-206ENST00000571409 CCPG1Q9ULG6 757 aa35.66■■■■□ 3.3
CTDNEP1-206ENST00000571409 CHMLP26374 656 aa35.65■■■■□ 3.3
CTDNEP1-206ENST00000571409 CNTN2Q02246 1040 aa35.65■■■■□ 3.3
CTDNEP1-206ENST00000571409 ZHX1Q9UKY1 873 aaPredicted RBP35.65■■■■□ 3.3
CTDNEP1-206ENST00000571409 POTEB2H3BUK9 544 aa35.64■■■■□ 3.3
CTDNEP1-206ENST00000571409 ICAM1P05362 532 aa35.64■■■■□ 3.3
CTDNEP1-206ENST00000571409 SNHG28P0DPA3 235 aa35.64■■■■□ 3.3
CTDNEP1-206ENST00000571409 CCDC178Q5BJE1 867 aa35.64■■■■□ 3.3
CTDNEP1-206ENST00000571409 CDKN2AIPQ9NXV6 580 aaPredicted RBP35.64■■■■□ 3.3
CTDNEP1-206ENST00000571409 ZNF543Q08ER8 600 aa35.63■■■■□ 3.29
CTDNEP1-206ENST00000571409 MUM1L1Q5H9M0 696 aa35.63■■■■□ 3.29
CTDNEP1-206ENST00000571409 FAM133AQ8N9E0 248 aa35.63■■■■□ 3.29
CTDNEP1-206ENST00000571409 LENG1Q96BZ8 264 aaPredicted RBP35.63■■■■□ 3.29
CTDNEP1-206ENST00000571409 PGK1P00558 417 aa35.62■■■■□ 3.29
CTDNEP1-206ENST00000571409 ARMCX2Q7L311 632 aa35.62■■■■□ 3.29
CTDNEP1-206ENST00000571409 KRT23Q9C075 422 aa35.62■■■■□ 3.29
CTDNEP1-206ENST00000571409 ZSWIM5Q9P217 1185 aa35.62■■■■□ 3.29
CTDNEP1-206ENST00000571409 FAM184BQ9ULE4 1060 aa35.62■■■■□ 3.29
CTDNEP1-206ENST00000571409 MCM3APO60318 1980 aa35.62■■■■□ 3.29
CTDNEP1-206ENST00000571409 ACVR2BQ13705 512 aa35.61■■■■□ 3.29
CTDNEP1-206ENST00000571409 CCDC144CPQ8IYA2 1237 aa35.61■■■■□ 3.29
CTDNEP1-206ENST00000571409 ZSCAN10Q96SZ4 725 aaPredicted RBP35.61■■■■□ 3.29
CTDNEP1-206ENST00000571409 GDF15Q99988 308 aa35.61■■■■□ 3.29
CTDNEP1-206ENST00000571409 CNNM2Q9H8M5 875 aa35.61■■■■□ 3.29
CTDNEP1-206ENST00000571409 ADCYAP1R1P41586 468 aa35.6■■■■□ 3.29
CTDNEP1-206ENST00000571409 RNF180Q86T96 592 aa35.6■■■■□ 3.29
CTDNEP1-206ENST00000571409 PNMA1Q8ND90 353 aa35.6■■■■□ 3.29
CTDNEP1-206ENST00000571409 ABHD16BQ9H3Z7 469 aa35.6■■■■□ 3.29
CTDNEP1-206ENST00000571409 KAT14Q9H8E8 782 aa35.6■■■■□ 3.29
CTDNEP1-206ENST00000571409 SLC39A5Q6ZMH5 540 aa35.59■■■■□ 3.29
CTDNEP1-206ENST00000571409 FERMT2Q96AC1 680 aa35.59■■■■□ 3.29
CTDNEP1-206ENST00000571409 SOWAHBA6NEL2 793 aa35.58■■■■□ 3.29
CTDNEP1-206ENST00000571409 MAGEA10P43363 369 aaPredicted RBP35.58■■■■□ 3.29
CTDNEP1-206ENST00000571409 RTP1P59025 263 aa35.58■■■■□ 3.29
CTDNEP1-206ENST00000571409 PTH1RQ03431 593 aa35.58■■■■□ 3.29
CTDNEP1-206ENST00000571409 GPATCH4Q5T3I0 446 aaKnown RBP35.58■■■■□ 3.29
CTDNEP1-206ENST00000571409 NSMFQ6X4W1 530 aa35.58■■■■□ 3.29
CTDNEP1-206ENST00000571409 ENAHQ8N8S7 591 aaPredicted RBP35.58■■■■□ 3.29
CTDNEP1-206ENST00000571409 ANKS1AQ92625 1134 aa35.58■■■■□ 3.29
CTDNEP1-206ENST00000571409 CYP39A1Q9NYL5 469 aa35.58■■■■□ 3.29
CTDNEP1-206ENST00000571409 PCDH10Q9P2E7 1040 aa35.58■■■■□ 3.29
CTDNEP1-206ENST00000571409 TNKSO95271 1327 aa35.57■■■■□ 3.29
CTDNEP1-206ENST00000571409 TRIOBPQ9H2D6 2365 aa35.57■■■■□ 3.28
CTDNEP1-206ENST00000571409 A0A1W2PPC1 479 aa35.57■■■■□ 3.28
CTDNEP1-206ENST00000571409 GOLGA8HP0CJ92 632 aa35.57■■■■□ 3.28
CTDNEP1-206ENST00000571409 PHF24Q9UPV7 400 aa35.57■■■■□ 3.28
CTDNEP1-206ENST00000571409 ADAMTS4O75173 837 aa35.56■■■■□ 3.28
CTDNEP1-206ENST00000571409 ATP11BQ9Y2G3 1177 aa35.56■■■■□ 3.28
CTDNEP1-206ENST00000571409 SYNRGQ9UMZ2 1314 aa35.56■■■■□ 3.28
CTDNEP1-206ENST00000571409 DNAH12Q6ZR08 3092 aa35.55■■■■□ 3.28
CTDNEP1-206ENST00000571409 ASB14A6NK59 587 aa35.55■■■■□ 3.28
CTDNEP1-206ENST00000571409 SGSM2O43147 1006 aa35.55■■■■□ 3.28
CTDNEP1-206ENST00000571409 BMP8BP34820 402 aa35.55■■■■□ 3.28
CTDNEP1-206ENST00000571409 CCDC144BQ3MJ40 725 aa35.55■■■■□ 3.28
CTDNEP1-206ENST00000571409 UBAC1Q9BSL1 405 aa35.55■■■■□ 3.28
CTDNEP1-206ENST00000571409 LCTP09848 1927 aa35.54■■■■□ 3.28
CTDNEP1-206ENST00000571409 DUSP11O75319 330 aaKnown RBP35.54■■■■□ 3.28
CTDNEP1-206ENST00000571409 KATNBL1Q9H079 304 aa35.54■■■■□ 3.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms