RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 STAG2Q8N3U4 1231 aa19.57■□□□□ 0.72
SCARF1-205ENST00000571272 CAGE1Q8TC20 777 aa19.57■□□□□ 0.72
SCARF1-205ENST00000571272 PCMTD1Q96MG8 357 aaPredicted RBP19.57■□□□□ 0.72
SCARF1-205ENST00000571272 DCP1AQ9NPI6 582 aaPredicted RBP19.57■□□□□ 0.72
SCARF1-205ENST00000571272 MED4Q9NPJ6 270 aa19.57■□□□□ 0.72
SCARF1-205ENST00000571272 A0A1W2PQC6 194 aa19.57■□□□□ 0.72
SCARF1-205ENST00000571272 MACROD2A1Z1Q3 448 aa19.57■□□□□ 0.72
SCARF1-205ENST00000571272 PSMA7O14818 248 aa19.57■□□□□ 0.72
SCARF1-205ENST00000571272 SYF2O95926 243 aaKnown RBP19.57■□□□□ 0.72
SCARF1-205ENST00000571272 EEF1GP26641 437 aaKnown RBP19.57■□□□□ 0.72
SCARF1-205ENST00000571272 FAM84BQ96KN1 310 aaPredicted RBP19.57■□□□□ 0.72
SCARF1-205ENST00000571272 JAG2Q9Y219 1238 aa19.57■□□□□ 0.72
SCARF1-205ENST00000571272 DISP2A7MBM2 1401 aa19.57■□□□□ 0.72
SCARF1-205ENST00000571272 PDS5AQ29RF7 1337 aaKnown RBP19.56■□□□□ 0.72
SCARF1-205ENST00000571272 KRT86O43790 486 aa19.56■□□□□ 0.72
SCARF1-205ENST00000571272 KLRC4O43908 158 aa19.56■□□□□ 0.72
SCARF1-205ENST00000571272 ANKRD18AQ8IVF6 992 aa19.56■□□□□ 0.72
SCARF1-205ENST00000571272 TUBGCP2Q9BSJ2 902 aa19.56■□□□□ 0.72
SCARF1-205ENST00000571272 RSPH14Q9UHP6 348 aa19.56■□□□□ 0.72
SCARF1-205ENST00000571272 CCDC194A0A1B0GVG4 234 aa19.56■□□□□ 0.72
SCARF1-205ENST00000571272 KLRK1P26718 216 aa19.56■□□□□ 0.72
SCARF1-205ENST00000571272 KRT83P78385 493 aa19.56■□□□□ 0.72
SCARF1-205ENST00000571272 STIM1Q13586 685 aa19.56■□□□□ 0.72
SCARF1-205ENST00000571272 INF2Q27J81 1249 aa19.56■□□□□ 0.72
SCARF1-205ENST00000571272 PAPD7Q5XG87 772 aaKnown RBP19.56■□□□□ 0.72
SCARF1-205ENST00000571272 CSGALNACT2Q8N6G5 542 aa19.56■□□□□ 0.72
SCARF1-205ENST00000571272 LRRC15Q8TF66 581 aa19.56■□□□□ 0.72
SCARF1-205ENST00000571272 NHEJ1Q9H9Q4 299 aaPredicted RBP19.56■□□□□ 0.72
SCARF1-205ENST00000571272 JADE2Q9NQC1 790 aa19.56■□□□□ 0.72
SCARF1-205ENST00000571272 ANKRD65E5RJM6 399 aa19.55■□□□□ 0.72
SCARF1-205ENST00000571272 PDE2AO00408 941 aaPredicted RBP19.55■□□□□ 0.72
SCARF1-205ENST00000571272 CALML3P27482 149 aa19.55■□□□□ 0.72
SCARF1-205ENST00000571272 DNM2P50570 870 aa19.55■□□□□ 0.72
SCARF1-205ENST00000571272 MECOMQ03112 1051 aa19.55■□□□□ 0.72
SCARF1-205ENST00000571272 TBC1D8BQ0IIM8 1120 aa19.55■□□□□ 0.72
SCARF1-205ENST00000571272 RCSD1Q6JBY9 416 aa19.55■□□□□ 0.72
SCARF1-205ENST00000571272 LRRC31Q6UY01 552 aa19.55■□□□□ 0.72
SCARF1-205ENST00000571272 NSUN4Q96CB9 384 aaKnown RBP19.55■□□□□ 0.72
SCARF1-205ENST00000571272 THAP9Q9H5L6 903 aa19.55■□□□□ 0.72
SCARF1-205ENST00000571272 CACNA1SQ13698 1873 aa19.55■□□□□ 0.72
SCARF1-205ENST00000571272 ORC4O43929 436 aa19.55■□□□□ 0.72
SCARF1-205ENST00000571272 MYBL2P10244 700 aa19.55■□□□□ 0.72
SCARF1-205ENST00000571272 PCP11498 1178 aaKnown RBP19.55■□□□□ 0.72
SCARF1-205ENST00000571272 TTI2Q6NXR4 508 aa19.55■□□□□ 0.72
SCARF1-205ENST00000571272 GOLGA6L1Q8N7Z2 621 aa19.55■□□□□ 0.72
SCARF1-205ENST00000571272 EXOC1Q9NV70 894 aa19.55■□□□□ 0.72
SCARF1-205ENST00000571272 HPCAL4Q9UM19 191 aa19.55■□□□□ 0.72
SCARF1-205ENST00000571272 PCDHA4Q9UN74 947 aa19.55■□□□□ 0.72
SCARF1-205ENST00000571272 NHSL1Q5SYE7 1610 aa19.55■□□□□ 0.72
SCARF1-205ENST00000571272 RASSF10A6NK89 507 aa19.54■□□□□ 0.72
SCARF1-205ENST00000571272 NKRFO15226 690 aaKnown RBP eCLIP19.54■□□□□ 0.72
SCARF1-205ENST00000571272 GPIHBP1Q8IV16 184 aa19.54■□□□□ 0.72
SCARF1-205ENST00000571272 ACSBG1Q96GR2 724 aa19.54■□□□□ 0.72
SCARF1-205ENST00000571272 ZNHIT6Q9NWK9 470 aaKnown RBP19.54■□□□□ 0.72
SCARF1-205ENST00000571272 IPO7O95373 1038 aaKnown RBP19.54■□□□□ 0.72
SCARF1-205ENST00000571272 SRGNP10124 158 aa19.54■□□□□ 0.72
SCARF1-205ENST00000571272 IDEP14735 1019 aa19.54■□□□□ 0.72
SCARF1-205ENST00000571272 KIF5BP33176 963 aa19.54■□□□□ 0.72
SCARF1-205ENST00000571272 CYLC1P35663 651 aaPredicted RBP19.54■□□□□ 0.72
SCARF1-205ENST00000571272 GIMAP8Q8ND71 665 aaPredicted RBP19.54■□□□□ 0.72
SCARF1-205ENST00000571272 DUSP9Q99956 384 aaKnown RBP19.54■□□□□ 0.72
SCARF1-205ENST00000571272 KAT14Q9H8E8 782 aa19.54■□□□□ 0.72
SCARF1-205ENST00000571272 UBE4AQ14139 1066 aa19.54■□□□□ 0.72
SCARF1-205ENST00000571272 MAP9Q49MG5 647 aa19.54■□□□□ 0.72
SCARF1-205ENST00000571272 CRNKL1Q9BZJ0 848 aaKnown RBP19.54■□□□□ 0.72
SCARF1-205ENST00000571272 RHOBTB3O94955 611 aa19.53■□□□□ 0.72
SCARF1-205ENST00000571272 PRDX5P30044 214 aa19.53■□□□□ 0.72
SCARF1-205ENST00000571272 C2orf54Q08AI8 447 aa19.53■□□□□ 0.72
SCARF1-205ENST00000571272 KCNB1Q14721 858 aa19.53■□□□□ 0.72
SCARF1-205ENST00000571272 MEA1Q16626 185 aa19.53■□□□□ 0.72
SCARF1-205ENST00000571272 CCDC178Q5BJE1 867 aa19.53■□□□□ 0.72
SCARF1-205ENST00000571272 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.53■□□□□ 0.72
SCARF1-205ENST00000571272 KRT26Q7Z3Y9 468 aa19.53■□□□□ 0.72
SCARF1-205ENST00000571272 AFAP1L1Q8TED9 768 aa19.53■□□□□ 0.72
SCARF1-205ENST00000571272 SMCR8Q8TEV9 937 aaPredicted RBP19.53■□□□□ 0.72
SCARF1-205ENST00000571272 MINPP1Q9UNW1 487 aa19.53■□□□□ 0.72
SCARF1-205ENST00000571272 ERFEQ4G0M1 354 aa19.53■□□□□ 0.72
SCARF1-205ENST00000571272 COG1Q8WTW3 980 aa19.53■□□□□ 0.72
SCARF1-205ENST00000571272 TTYH3Q9C0H2 523 aa19.53■□□□□ 0.72
SCARF1-205ENST00000571272 VIPAS39Q9H9C1 493 aa19.53■□□□□ 0.72
SCARF1-205ENST00000571272 TFCP2L1Q9NZI6 479 aa19.53■□□□□ 0.72
SCARF1-205ENST00000571272 TAF1P21675 1872 aa19.52■□□□□ 0.72
SCARF1-205ENST00000571272 USP17L8P0C7I0 530 aa19.52■□□□□ 0.72
SCARF1-205ENST00000571272 GGCXP38435 758 aa19.52■□□□□ 0.72
SCARF1-205ENST00000571272 MTIF2P46199 727 aaKnown RBP19.52■□□□□ 0.72
SCARF1-205ENST00000571272 TFAP4Q01664 338 aa19.52■□□□□ 0.72
SCARF1-205ENST00000571272 ANKRD40Q6AI12 368 aa19.52■□□□□ 0.72
SCARF1-205ENST00000571272 HEATR3Q7Z4Q2 680 aa19.52■□□□□ 0.72
SCARF1-205ENST00000571272 CNOT6LQ96LI5 555 aaKnown RBP19.52■□□□□ 0.72
SCARF1-205ENST00000571272 DRC1Q96MC2 740 aa19.52■□□□□ 0.72
SCARF1-205ENST00000571272 KBTBD4Q9NVX7 518 aa19.52■□□□□ 0.72
SCARF1-205ENST00000571272 MCM9Q9NXL9 1143 aa19.52■□□□□ 0.72
SCARF1-205ENST00000571272 PCDHA6Q9UN73 950 aa19.52■□□□□ 0.72
SCARF1-205ENST00000571272 PCDHA8Q9Y5H6 950 aa19.52■□□□□ 0.72
SCARF1-205ENST00000571272 RPS6KA5O75582 802 aa19.52■□□□□ 0.71
SCARF1-205ENST00000571272 PRPF6O94906 941 aaKnown RBP19.52■□□□□ 0.71
SCARF1-205ENST00000571272 PLEKP08567 350 aaPredicted RBP19.52■□□□□ 0.71
SCARF1-205ENST00000571272 MRPS25P82663 173 aaKnown RBP19.52■□□□□ 0.71
SCARF1-205ENST00000571272 CKAP4Q07065 602 aaKnown RBP19.52■□□□□ 0.71
SCARF1-205ENST00000571272 PNMA1Q8ND90 353 aa19.52■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms