RNA–Protein interactions for RNA: ENST00000571263.2

CDRT1-206, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best)

Gene CDRT1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-206ENST00000571263 INHBEP58166 350 aa13.71□□□□□ -0.21
CDRT1-206ENST00000571263 SLC35G1Q2M3R5 365 aa13.71□□□□□ -0.21
CDRT1-206ENST00000571263 QRICH1Q2TAL8 776 aa13.71□□□□□ -0.21
CDRT1-206ENST00000571263 WWC2Q6AWC2 1192 aa13.71□□□□□ -0.21
CDRT1-206ENST00000571263 MCTP1Q6DN14 999 aa13.71□□□□□ -0.21
CDRT1-206ENST00000571263 RASGRP2Q7LDG7 609 aa13.71□□□□□ -0.21
CDRT1-206ENST00000571263 MB21D1Q8N884 522 aa13.71□□□□□ -0.21
CDRT1-206ENST00000571263 DAGLBQ8NCG7 672 aa13.71□□□□□ -0.21
CDRT1-206ENST00000571263 CCDC102AQ96A19 550 aa13.71□□□□□ -0.21
CDRT1-206ENST00000571263 ZNF396Q96N95 335 aaPredicted RBP13.71□□□□□ -0.21
CDRT1-206ENST00000571263 CPVLQ9H3G5 476 aa13.71□□□□□ -0.21
CDRT1-206ENST00000571263 VPS54Q9P1Q0 977 aa13.71□□□□□ -0.21
CDRT1-206ENST00000571263 PNMA3Q9UL41 463 aa13.71□□□□□ -0.21
CDRT1-206ENST00000571263 PCDHA4Q9UN74 947 aa13.71□□□□□ -0.21
CDRT1-206ENST00000571263 ADAMTS5Q9UNA0 930 aa13.71□□□□□ -0.21
CDRT1-206ENST00000571263 AGTPBP1Q9UPW5 1226 aa13.71□□□□□ -0.21
CDRT1-206ENST00000571263 PCDHA1Q9Y5I3 950 aa13.71□□□□□ -0.21
CDRT1-206ENST00000571263 TRPM7Q96QT4 1865 aa13.71□□□□□ -0.21
CDRT1-206ENST00000571263 ABCB11O95342 1321 aa13.7□□□□□ -0.22
CDRT1-206ENST00000571263 SMCO2A6NFE2 343 aa13.7□□□□□ -0.22
CDRT1-206ENST00000571263 TMEM88BA6NKF7 163 aa13.7□□□□□ -0.22
CDRT1-206ENST00000571263 GOLGA6L22H0YM25 854 aa13.7□□□□□ -0.22
CDRT1-206ENST00000571263 ICAM1P05362 532 aa13.7□□□□□ -0.22
CDRT1-206ENST00000571263 PTMSP20962 102 aa13.7□□□□□ -0.22
CDRT1-206ENST00000571263 FMR1Q06787 632 aaKnown RBP eCLIP13.7□□□□□ -0.22
CDRT1-206ENST00000571263 CSPP1Q1MSJ5 1256 aa13.7□□□□□ -0.22
CDRT1-206ENST00000571263 SPRYD7Q5W111 196 aa13.7□□□□□ -0.22
CDRT1-206ENST00000571263 RGMBQ6NW40 437 aa13.7□□□□□ -0.22
CDRT1-206ENST00000571263 GADL1Q6ZQY3 521 aa13.7□□□□□ -0.22
CDRT1-206ENST00000571263 SAPCD2Q86UD0 394 aa13.7□□□□□ -0.22
CDRT1-206ENST00000571263 DIS3L2Q8IYB7 885 aaKnown RBP13.7□□□□□ -0.22
CDRT1-206ENST00000571263 BLIDQ8IZY5 108 aa13.7□□□□□ -0.22
CDRT1-206ENST00000571263 PIBF1Q8WXW3 757 aa13.7□□□□□ -0.22
CDRT1-206ENST00000571263 TNPO1Q92973 898 aaKnown RBP13.7□□□□□ -0.22
CDRT1-206ENST00000571263 AIFM3Q96NN9 605 aa13.7□□□□□ -0.22
CDRT1-206ENST00000571263 SLC38A10Q9HBR0 1119 aa13.7□□□□□ -0.22
CDRT1-206ENST00000571263 MAP3K20Q9NYL2 800 aaKnown RBP13.7□□□□□ -0.22
CDRT1-206ENST00000571263 CFAP45Q9UL16 551 aa13.7□□□□□ -0.22
CDRT1-206ENST00000571263 MRPL11Q9Y3B7 192 aaKnown RBP13.7□□□□□ -0.22
CDRT1-206ENST00000571263 TLL2Q9Y6L7 1015 aa13.7□□□□□ -0.22
CDRT1-206ENST00000571263 MYH6P13533 1939 aa13.69□□□□□ -0.22
CDRT1-206ENST00000571263 hCG_1642624A0A1W2PR95 340 aa13.69□□□□□ -0.22
CDRT1-206ENST00000571263 MANSC4A6NHS7 340 aaPredicted RBP13.69□□□□□ -0.22
CDRT1-206ENST00000571263 ATP2A1O14983 1001 aa13.69□□□□□ -0.22
CDRT1-206ENST00000571263 IRX3P78415 501 aaPredicted RBP13.69□□□□□ -0.22
CDRT1-206ENST00000571263 GUCY1B3Q02153 619 aa13.69□□□□□ -0.22
CDRT1-206ENST00000571263 KIF23Q02241 960 aaPredicted RBP13.69□□□□□ -0.22
CDRT1-206ENST00000571263 RESTQ13127 1097 aa13.69□□□□□ -0.22
CDRT1-206ENST00000571263 PKP1Q13835 747 aa13.69□□□□□ -0.22
CDRT1-206ENST00000571263 TKFCQ3LXA3 575 aa13.69□□□□□ -0.22
CDRT1-206ENST00000571263 LBX2Q6XYB7 198 aa13.69□□□□□ -0.22
CDRT1-206ENST00000571263 CNKSR2Q8WXI2 1034 aa13.69□□□□□ -0.22
CDRT1-206ENST00000571263 CUL5Q93034 780 aa13.69□□□□□ -0.22
CDRT1-206ENST00000571263 ZCCHC17Q9NP64 241 aaKnown RBP13.69□□□□□ -0.22
CDRT1-206ENST00000571263 RIC8AQ9NPQ8 531 aa13.69□□□□□ -0.22
CDRT1-206ENST00000571263 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.69□□□□□ -0.22
CDRT1-206ENST00000571263 VWA5AO00534 786 aa13.68□□□□□ -0.22
CDRT1-206ENST00000571263 COPB2P35606 906 aa13.68□□□□□ -0.22
CDRT1-206ENST00000571263 ZNF157P51786 506 aaPredicted RBP13.68□□□□□ -0.22
CDRT1-206ENST00000571263 ADCY7P51828 1080 aa13.68□□□□□ -0.22
CDRT1-206ENST00000571263 KRT85P78386 507 aa13.68□□□□□ -0.22
CDRT1-206ENST00000571263 RILPL1Q5EBL4 403 aa13.68□□□□□ -0.22
CDRT1-206ENST00000571263 OTUD7BQ6GQQ9 843 aa13.68□□□□□ -0.22
CDRT1-206ENST00000571263 ANKRD23Q86SG2 305 aa13.68□□□□□ -0.22
CDRT1-206ENST00000571263 MCF2L2Q86YR7 1114 aa13.68□□□□□ -0.22
CDRT1-206ENST00000571263 NOSTRINQ8IVI9 506 aa13.68□□□□□ -0.22
CDRT1-206ENST00000571263 REM2Q8IYK8 340 aaPredicted RBP13.68□□□□□ -0.22
CDRT1-206ENST00000571263 ZNF784Q8NCA9 323 aaPredicted RBP13.68□□□□□ -0.22
CDRT1-206ENST00000571263 GPKOWQ92917 476 aaPredicted RBP eCLIP13.68□□□□□ -0.22
CDRT1-206ENST00000571263 PSTPIP2Q9H939 334 aa13.68□□□□□ -0.22
CDRT1-206ENST00000571263 FBXO28Q9NVF7 368 aa13.68□□□□□ -0.22
CDRT1-206ENST00000571263 NOL7Q9UMY1 257 aaKnown RBP13.68□□□□□ -0.22
CDRT1-206ENST00000571263 KCNJ14Q9UNX9 436 aa13.68□□□□□ -0.22
CDRT1-206ENST00000571263 CCL15-CCL14A0A0B4J2E2 113 aa13.67□□□□□ -0.22
CDRT1-206ENST00000571263 TESPA1A2RU30 521 aaPredicted RBP13.67□□□□□ -0.22
CDRT1-206ENST00000571263 BTBD18B2RXH4 712 aa13.67□□□□□ -0.22
CDRT1-206ENST00000571263 DTNBO60941 627 aa13.67□□□□□ -0.22
CDRT1-206ENST00000571263 FOSP01100 380 aaPredicted RBP13.67□□□□□ -0.22
CDRT1-206ENST00000571263 TRAPPC10P48553 1259 aa13.67□□□□□ -0.22
CDRT1-206ENST00000571263 FOSBP53539 338 aa13.67□□□□□ -0.22
CDRT1-206ENST00000571263 CCL15Q16663 113 aa13.67□□□□□ -0.22
CDRT1-206ENST00000571263 KRT25Q7Z3Z0 450 aa13.67□□□□□ -0.22
CDRT1-206ENST00000571263 FERMT3Q86UX7 667 aa13.67□□□□□ -0.22
CDRT1-206ENST00000571263 COA7Q96BR5 231 aa13.67□□□□□ -0.22
CDRT1-206ENST00000571263 MS4A4AQ96JQ5 239 aa13.67□□□□□ -0.22
CDRT1-206ENST00000571263 SCAND2PQ9GZW5 306 aaPredicted RBP13.67□□□□□ -0.22
CDRT1-206ENST00000571263 ABT1Q9ULW3 272 aaKnown RBP13.67□□□□□ -0.22
CDRT1-206ENST00000571263 UTRNP46939 3433 aa13.67□□□□□ -0.22
CDRT1-206ENST00000571263 LOC285556D6RIA3 1793 aa13.66□□□□□ -0.22
CDRT1-206ENST00000571263 CCDC194A0A1B0GVG4 234 aa13.66□□□□□ -0.22
CDRT1-206ENST00000571263 PIK3CDO00329 1044 aa13.66□□□□□ -0.22
CDRT1-206ENST00000571263 PPP1R11O60927 126 aaPredicted RBP13.66□□□□□ -0.22
CDRT1-206ENST00000571263 GJA5P36382 358 aa13.66□□□□□ -0.22
CDRT1-206ENST00000571263 AP3B2Q13367 1082 aa13.66□□□□□ -0.22
CDRT1-206ENST00000571263 REXO1Q8N1G1 1221 aaKnown RBP13.66□□□□□ -0.22
CDRT1-206ENST00000571263 ATG4CQ96DT6 458 aa13.66□□□□□ -0.22
CDRT1-206ENST00000571263 NAP1L4Q99733 375 aaKnown RBP13.66□□□□□ -0.22
CDRT1-206ENST00000571263 GJB4Q9NTQ9 266 aa13.66□□□□□ -0.22
CDRT1-206ENST00000571263 CCPG1Q9ULG6 757 aa13.66□□□□□ -0.22
CDRT1-206ENST00000571263 SPDYE16A6NNV3 312 aaPredicted RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms