RNA–Protein interactions for RNA: ENST00000571190.1

CIITA-206, Transcript of class II major histocompatibility complex transactivator, humanhuman

Gene CIITA, Length 479 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-206ENST00000571190 STAG1Q8WVM7 1258 aa20.86■□□□□ 0.93
CIITA-206ENST00000571190 CHMP4CQ96CF2 233 aa20.86■□□□□ 0.93
CIITA-206ENST00000571190 AGBL1Q96MI9 1066 aa20.86■□□□□ 0.93
CIITA-206ENST00000571190 TOX2Q96NM4 488 aa20.86■□□□□ 0.93
CIITA-206ENST00000571190 ABHD16BQ9H3Z7 469 aa20.86■□□□□ 0.93
CIITA-206ENST00000571190 STARD7Q9NQZ5 370 aa20.86■□□□□ 0.93
CIITA-206ENST00000571190 COL11A1P12107 1806 aaPredicted RBP20.85■□□□□ 0.93
CIITA-206ENST00000571190 LTBP2Q14767 1821 aa20.85■□□□□ 0.93
CIITA-206ENST00000571190 MYH7P12883 1935 aa20.85■□□□□ 0.93
CIITA-206ENST00000571190 CTAGE5O15320 804 aa20.85■□□□□ 0.93
CIITA-206ENST00000571190 NMT2O60551 498 aa20.85■□□□□ 0.93
CIITA-206ENST00000571190 SLC3A2P08195 630 aaKnown RBP20.85■□□□□ 0.93
CIITA-206ENST00000571190 FDX1P10109 184 aa20.85■□□□□ 0.93
CIITA-206ENST00000571190 MCCP23508 829 aa20.85■□□□□ 0.93
CIITA-206ENST00000571190 ZNF697Q5TEC3 545 aa20.85■□□□□ 0.93
CIITA-206ENST00000571190 CCDC144CPQ8IYA2 1237 aa20.85■□□□□ 0.93
CIITA-206ENST00000571190 FAM133AQ8N9E0 248 aa20.85■□□□□ 0.93
CIITA-206ENST00000571190 UPF3AQ9H1J1 476 aaKnown RBP20.85■□□□□ 0.93
CIITA-206ENST00000571190 SEMA6BQ9H3T3 888 aa20.85■□□□□ 0.93
CIITA-206ENST00000571190 HOMER2Q9NSB8 354 aa20.85■□□□□ 0.93
CIITA-206ENST00000571190 SOWAHBA6NEL2 793 aa20.84■□□□□ 0.93
CIITA-206ENST00000571190 PLA2G6O60733 806 aa20.84■□□□□ 0.93
CIITA-206ENST00000571190 NOVP48745 357 aa20.84■□□□□ 0.93
CIITA-206ENST00000571190 CDK7P50613 346 aa20.84■□□□□ 0.93
CIITA-206ENST00000571190 STAT2P52630 851 aa20.84■□□□□ 0.93
CIITA-206ENST00000571190 SMAD3P84022 425 aaKnown RBP20.84■□□□□ 0.93
CIITA-206ENST00000571190 FAM160B2Q86V87 743 aa20.84■□□□□ 0.93
CIITA-206ENST00000571190 CHURC1Q8WUH1 139 aa20.84■□□□□ 0.93
CIITA-206ENST00000571190 NUP133Q8WUM0 1156 aa20.84■□□□□ 0.93
CIITA-206ENST00000571190 TTYH1Q9H313 450 aaPredicted RBP20.84■□□□□ 0.93
CIITA-206ENST00000571190 A1CFQ9NQ94 594 aaKnown RBP20.84■□□□□ 0.93
CIITA-206ENST00000571190 TMEM39AQ9NV64 488 aa20.84■□□□□ 0.93
CIITA-206ENST00000571190 ANAPC4Q9UJX5 808 aa20.84■□□□□ 0.93
CIITA-206ENST00000571190 MYH8P13535 1937 aa20.84■□□□□ 0.93
CIITA-206ENST00000571190 ASGR1P07306 291 aa20.83■□□□□ 0.93
CIITA-206ENST00000571190 RAG1P15918 1043 aa20.83■□□□□ 0.93
CIITA-206ENST00000571190 SLC1A4P43007 532 aa20.83■□□□□ 0.93
CIITA-206ENST00000571190 RRP1P56182 461 aaKnown RBP20.83■□□□□ 0.93
CIITA-206ENST00000571190 GJA9P57773 515 aa20.83■□□□□ 0.93
CIITA-206ENST00000571190 SNAP25P60880 206 aa20.83■□□□□ 0.93
CIITA-206ENST00000571190 KCTD1Q719H9 257 aa20.83■□□□□ 0.93
CIITA-206ENST00000571190 CDX2Q99626 313 aaPredicted RBP20.83■□□□□ 0.93
CIITA-206ENST00000571190 ACAD9Q9H845 621 aa20.83■□□□□ 0.93
CIITA-206ENST00000571190 RNF146Q9NTX7 359 aa20.83■□□□□ 0.93
CIITA-206ENST00000571190 TBX21Q9UL17 535 aa20.83■□□□□ 0.93
CIITA-206ENST00000571190 ASTN1O14525 1302 aa20.82■□□□□ 0.92
CIITA-206ENST00000571190 ELP1O95163 1332 aa20.82■□□□□ 0.92
CIITA-206ENST00000571190 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.82■□□□□ 0.92
CIITA-206ENST00000571190 DCDC2CA8MYV0 355 aa20.82■□□□□ 0.92
CIITA-206ENST00000571190 FGRP09769 529 aa20.82■□□□□ 0.92
CIITA-206ENST00000571190 C6orf222P0C671 652 aaPredicted RBP20.82■□□□□ 0.92
CIITA-206ENST00000571190 NKX3-2P78367 333 aa20.82■□□□□ 0.92
CIITA-206ENST00000571190 ANKRD45Q5TZF3 282 aa20.82■□□□□ 0.92
CIITA-206ENST00000571190 RCSD1Q6JBY9 416 aa20.82■□□□□ 0.92
CIITA-206ENST00000571190 STX8Q9UNK0 236 aa20.82■□□□□ 0.92
CIITA-206ENST00000571190 DDX49Q9Y6V7 483 aaKnown RBP20.82■□□□□ 0.92
CIITA-206ENST00000571190 TSPY2A6NKD2 308 aa20.81■□□□□ 0.92
CIITA-206ENST00000571190 PDE1AP54750 535 aa20.81■□□□□ 0.92
CIITA-206ENST00000571190 MUM1L1Q5H9M0 696 aa20.81■□□□□ 0.92
CIITA-206ENST00000571190 EVI5LQ96CN4 794 aa20.81■□□□□ 0.92
CIITA-206ENST00000571190 GLT1D1Q96MS3 346 aa20.81■□□□□ 0.92
CIITA-206ENST00000571190 TRERF1Q96PN7 1200 aa20.81■□□□□ 0.92
CIITA-206ENST00000571190 CRBNQ96SW2 442 aa20.81■□□□□ 0.92
CIITA-206ENST00000571190 PRR12Q9ULL5 1215 aa20.81■□□□□ 0.92
CIITA-206ENST00000571190 ISY1Q9ULR0 285 aaKnown RBP20.81■□□□□ 0.92
CIITA-206ENST00000571190 PTGS1P23219 599 aa20.8■□□□□ 0.92
CIITA-206ENST00000571190 FPGSQ05932 587 aa20.8■□□□□ 0.92
CIITA-206ENST00000571190 IKQ13123 557 aaPredicted RBP20.8■□□□□ 0.92
CIITA-206ENST00000571190 ALX1Q15699 326 aa20.8■□□□□ 0.92
CIITA-206ENST00000571190 TKFCQ3LXA3 575 aa20.8■□□□□ 0.92
CIITA-206ENST00000571190 PCSK9Q8NBP7 692 aaKnown RBP20.8■□□□□ 0.92
CIITA-206ENST00000571190 RNPC3Q96LT9 517 aaKnown RBP20.8■□□□□ 0.92
CIITA-206ENST00000571190 ORC4O43929 436 aa20.79■□□□□ 0.92
CIITA-206ENST00000571190 TIMP1P01033 207 aa20.79■□□□□ 0.92
CIITA-206ENST00000571190 ALAS1P13196 640 aa20.79■□□□□ 0.92
CIITA-206ENST00000571190 GNASQ5JWF2 1037 aa20.79■□□□□ 0.92
CIITA-206ENST00000571190 PPP4R3BQ5MIZ7 849 aa20.79■□□□□ 0.92
CIITA-206ENST00000571190 CCDC174Q6PII3 467 aa20.79■□□□□ 0.92
CIITA-206ENST00000571190 C16orf59Q7L2K0 433 aa20.79■□□□□ 0.92
CIITA-206ENST00000571190 FAM227BQ96M60 508 aa20.79■□□□□ 0.92
CIITA-206ENST00000571190 HELLSQ9NRZ9 838 aa20.79■□□□□ 0.92
CIITA-206ENST00000571190 GNEQ9Y223 722 aaKnown RBP20.79■□□□□ 0.92
CIITA-206ENST00000571190 A0A0D9SFI3 127 aa20.78■□□□□ 0.92
CIITA-206ENST00000571190 ARVCFO00192 962 aa20.78■□□□□ 0.92
CIITA-206ENST00000571190 RANBP6O60518 1105 aaKnown RBP20.78■□□□□ 0.92
CIITA-206ENST00000571190 FGAP02671 866 aa20.78■□□□□ 0.92
CIITA-206ENST00000571190 BEX3Q00994 111 aa20.78■□□□□ 0.92
CIITA-206ENST00000571190 TNFAIP2Q03169 654 aa20.78■□□□□ 0.92
CIITA-206ENST00000571190 TMEM63BQ5T3F8 832 aa20.78■□□□□ 0.92
CIITA-206ENST00000571190 TTBK2Q6IQ55 1244 aa20.78■□□□□ 0.92
CIITA-206ENST00000571190 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.78■□□□□ 0.92
CIITA-206ENST00000571190 PURBQ96QR8 312 aaKnown RBP20.78■□□□□ 0.92
CIITA-206ENST00000571190 SPC25Q9HBM1 224 aa20.78■□□□□ 0.92
CIITA-206ENST00000571190 CYP39A1Q9NYL5 469 aa20.78■□□□□ 0.92
CIITA-206ENST00000571190 SMCHD1A6NHR9 2005 aa20.78■□□□□ 0.92
CIITA-206ENST00000571190 ZNFX1Q9P2E3 1918 aaKnown RBP20.77■□□□□ 0.92
CIITA-206ENST00000571190 A0A0U1RQG5 324 aaPredicted RBP20.77■□□□□ 0.92
CIITA-206ENST00000571190 ASB14A6NK59 587 aa20.77■□□□□ 0.92
CIITA-206ENST00000571190 HDAC1Q13547 482 aaPredicted RBP20.77■□□□□ 0.92
CIITA-206ENST00000571190 FAM126BQ8IXS8 530 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms