RNA–Protein interactions for RNA: ENST00000570324.1

NPLOC4-204, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 414 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-204ENST00000570324 FOXP2O15409 715 aa10.53□□□□□ -0.72
NPLOC4-204ENST00000570324 IGHDP01880 384 aa10.53□□□□□ -0.72
NPLOC4-204ENST00000570324 ZNF865P0CJ78 1059 aaPredicted RBP10.53□□□□□ -0.72
NPLOC4-204ENST00000570324 TOP1P11387 765 aaKnown RBP10.53□□□□□ -0.72
NPLOC4-204ENST00000570324 NUCB1Q02818 461 aa10.53□□□□□ -0.72
NPLOC4-204ENST00000570324 ACVR2BQ13705 512 aa10.53□□□□□ -0.72
NPLOC4-204ENST00000570324 CWC27Q6UX04 472 aaKnown RBP10.53□□□□□ -0.72
NPLOC4-204ENST00000570324 ZNF467Q7Z7K2 595 aaPredicted RBP10.53□□□□□ -0.72
NPLOC4-204ENST00000570324 PLEKHM2Q8IWE5 1019 aa10.53□□□□□ -0.72
NPLOC4-204ENST00000570324 TRERF1Q96PN7 1200 aa10.53□□□□□ -0.72
NPLOC4-204ENST00000570324 ABHD16BQ9H3Z7 469 aa10.53□□□□□ -0.72
NPLOC4-204ENST00000570324 RNF146Q9NTX7 359 aa10.53□□□□□ -0.72
NPLOC4-204ENST00000570324 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.53□□□□□ -0.72
NPLOC4-204ENST00000570324 PRR12Q9ULL5 1215 aa10.53□□□□□ -0.72
NPLOC4-204ENST00000570324 SUPT16HQ9Y5B9 1047 aaKnown RBP10.53□□□□□ -0.72
NPLOC4-204ENST00000570324 ZMYM6O95789 1325 aa10.53□□□□□ -0.72
NPLOC4-204ENST00000570324 TRIOBPQ9H2D6 2365 aa10.52□□□□□ -0.73
NPLOC4-204ENST00000570324 DNAJC25-GNG10A0A024R161 153 aa10.52□□□□□ -0.73
NPLOC4-204ENST00000570324 PLA2G6O60733 806 aa10.52□□□□□ -0.73
NPLOC4-204ENST00000570324 PCP11498 1178 aaKnown RBP10.52□□□□□ -0.73
NPLOC4-204ENST00000570324 SNAP25P60880 206 aa10.52□□□□□ -0.73
NPLOC4-204ENST00000570324 TRIM60Q495X7 471 aa10.52□□□□□ -0.73
NPLOC4-204ENST00000570324 AKNAD1Q5T1N1 836 aa10.52□□□□□ -0.73
NPLOC4-204ENST00000570324 MAMDC4Q6UXC1 1216 aa10.52□□□□□ -0.73
NPLOC4-204ENST00000570324 NOL8Q76FK4 1167 aaKnown RBP10.52□□□□□ -0.73
NPLOC4-204ENST00000570324 ZNF589Q86UQ0 364 aaPredicted RBP10.52□□□□□ -0.73
NPLOC4-204ENST00000570324 NUP133Q8WUM0 1156 aa10.52□□□□□ -0.73
NPLOC4-204ENST00000570324 ESR2Q92731 530 aa10.52□□□□□ -0.73
NPLOC4-204ENST00000570324 VTI1AQ96AJ9 217 aa10.52□□□□□ -0.73
NPLOC4-204ENST00000570324 LRCH3Q96II8 777 aa10.52□□□□□ -0.73
NPLOC4-204ENST00000570324 AGBL1Q96MI9 1066 aa10.52□□□□□ -0.73
NPLOC4-204ENST00000570324 OSBPL3Q9H4L5 887 aa10.52□□□□□ -0.73
NPLOC4-204ENST00000570324 GPCPD1Q9NPB8 672 aa10.52□□□□□ -0.73
NPLOC4-204ENST00000570324 CCPG1Q9ULG6 757 aa10.52□□□□□ -0.73
NPLOC4-204ENST00000570324 PHF24Q9UPV7 400 aa10.52□□□□□ -0.73
NPLOC4-204ENST00000570324 BRCA2P51587 3418 aa10.52□□□□□ -0.73
NPLOC4-204ENST00000570324 SMCHD1A6NHR9 2005 aa10.51□□□□□ -0.73
NPLOC4-204ENST00000570324 ASB14A6NK59 587 aa10.51□□□□□ -0.73
NPLOC4-204ENST00000570324 SOX1O00570 391 aaPredicted RBP10.51□□□□□ -0.73
NPLOC4-204ENST00000570324 SNAI1O95863 264 aaPredicted RBP10.51□□□□□ -0.73
NPLOC4-204ENST00000570324 FGRP09769 529 aa10.51□□□□□ -0.73
NPLOC4-204ENST00000570324 C6orf222P0C671 652 aaPredicted RBP10.51□□□□□ -0.73
NPLOC4-204ENST00000570324 SYDE2Q5VT97 1194 aa10.51□□□□□ -0.73
NPLOC4-204ENST00000570324 NSMFQ6X4W1 530 aa10.51□□□□□ -0.73
NPLOC4-204ENST00000570324 ARMCX2Q7L311 632 aa10.51□□□□□ -0.73
NPLOC4-204ENST00000570324 CCDC144CPQ8IYA2 1237 aa10.51□□□□□ -0.73
NPLOC4-204ENST00000570324 PCSK9Q8NBP7 692 aaKnown RBP10.51□□□□□ -0.73
NPLOC4-204ENST00000570324 LENG1Q96BZ8 264 aaPredicted RBP10.51□□□□□ -0.73
NPLOC4-204ENST00000570324 TTC14Q96N46 770 aa10.51□□□□□ -0.73
NPLOC4-204ENST00000570324 TMEM47Q9BQJ4 181 aa10.51□□□□□ -0.73
NPLOC4-204ENST00000570324 TSEN34Q9BSV6 310 aaKnown RBP10.51□□□□□ -0.73
NPLOC4-204ENST00000570324 STARD7Q9NQZ5 370 aa10.51□□□□□ -0.73
NPLOC4-204ENST00000570324 TCP11L1Q9NUJ3 509 aa10.51□□□□□ -0.73
NPLOC4-204ENST00000570324 FRMPD2Q68DX3 1309 aaPredicted RBP10.51□□□□□ -0.73
NPLOC4-204ENST00000570324 A0A1W2PQ45 241 aaPredicted RBP10.5□□□□□ -0.73
NPLOC4-204ENST00000570324 A0A1W2PQY0 241 aa10.5□□□□□ -0.73
NPLOC4-204ENST00000570324 DCDC2CA8MYV0 355 aa10.5□□□□□ -0.73
NPLOC4-204ENST00000570324 DUSP11O75319 330 aaKnown RBP10.5□□□□□ -0.73
NPLOC4-204ENST00000570324 SLC16A2P36021 539 aa10.5□□□□□ -0.73
NPLOC4-204ENST00000570324 ACLYP53396 1101 aa10.5□□□□□ -0.73
NPLOC4-204ENST00000570324 CNTN2Q02246 1040 aa10.5□□□□□ -0.73
NPLOC4-204ENST00000570324 TLE2Q04725 743 aa10.5□□□□□ -0.73
NPLOC4-204ENST00000570324 IMMTQ16891 758 aaKnown RBP10.5□□□□□ -0.73
NPLOC4-204ENST00000570324 CCDC144BQ3MJ40 725 aa10.5□□□□□ -0.73
NPLOC4-204ENST00000570324 LRIT3Q3SXY7 679 aa10.5□□□□□ -0.73
NPLOC4-204ENST00000570324 CCDC178Q5BJE1 867 aa10.5□□□□□ -0.73
NPLOC4-204ENST00000570324 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.5□□□□□ -0.73
NPLOC4-204ENST00000570324 IQCA1Q86XH1 822 aa10.5□□□□□ -0.73
NPLOC4-204ENST00000570324 GLT1D1Q96MS3 346 aa10.5□□□□□ -0.73
NPLOC4-204ENST00000570324 A1CFQ9NQ94 594 aaKnown RBP10.5□□□□□ -0.73
NPLOC4-204ENST00000570324 CTNNA3Q9UI47 895 aa10.5□□□□□ -0.73
NPLOC4-204ENST00000570324 PNMA2Q9UL42 364 aa10.5□□□□□ -0.73
NPLOC4-204ENST00000570324 TACC3Q9Y6A5 838 aa10.5□□□□□ -0.73
NPLOC4-204ENST00000570324 ZNF536O15090 1300 aa10.5□□□□□ -0.73
NPLOC4-204ENST00000570324 SYNRGQ9UMZ2 1314 aa10.5□□□□□ -0.73
NPLOC4-204ENST00000570324 MKI67P46013 3256 aaKnown RBP10.5□□□□□ -0.73
NPLOC4-204ENST00000570324 PTPDC1A2A3K4 754 aa10.49□□□□□ -0.73
NPLOC4-204ENST00000570324 MOXD2PA6NHM9 499 aa10.49□□□□□ -0.73
NPLOC4-204ENST00000570324 PQBP1O60828 265 aaKnown RBP10.49□□□□□ -0.73
NPLOC4-204ENST00000570324 ADAMTS4O75173 837 aa10.49□□□□□ -0.73
NPLOC4-204ENST00000570324 ICAM1P05362 532 aa10.49□□□□□ -0.73
NPLOC4-204ENST00000570324 CLTBP09497 229 aa10.49□□□□□ -0.73
NPLOC4-204ENST00000570324 RAG1P15918 1043 aa10.49□□□□□ -0.73
NPLOC4-204ENST00000570324 NT5C2P49902 561 aa10.49□□□□□ -0.73
NPLOC4-204ENST00000570324 TNFAIP2Q03169 654 aa10.49□□□□□ -0.73
NPLOC4-204ENST00000570324 SNX17Q15036 470 aa10.49□□□□□ -0.73
NPLOC4-204ENST00000570324 KCNA10Q16322 511 aa10.49□□□□□ -0.73
NPLOC4-204ENST00000570324 GNASQ5JWF2 1037 aa10.49□□□□□ -0.73
NPLOC4-204ENST00000570324 C1orf53Q5VUE5 145 aa10.49□□□□□ -0.73
NPLOC4-204ENST00000570324 TTBK2Q6IQ55 1244 aa10.49□□□□□ -0.73
NPLOC4-204ENST00000570324 RASGRP2Q7LDG7 609 aa10.49□□□□□ -0.73
NPLOC4-204ENST00000570324 FAM133AQ8N9E0 248 aa10.49□□□□□ -0.73
NPLOC4-204ENST00000570324 MPHOSPH6Q99547 160 aaKnown RBP10.49□□□□□ -0.73
NPLOC4-204ENST00000570324 ZKSCAN3Q9BRR0 538 aa10.49□□□□□ -0.73
NPLOC4-204ENST00000570324 AP5M1Q9H0R1 490 aa10.49□□□□□ -0.73
NPLOC4-204ENST00000570324 RANBP17Q9H2T7 1088 aaKnown RBP10.49□□□□□ -0.73
NPLOC4-204ENST00000570324 TMEM39AQ9NV64 488 aa10.49□□□□□ -0.73
NPLOC4-204ENST00000570324 ADD3Q9UEY8 706 aaKnown RBP10.49□□□□□ -0.73
NPLOC4-204ENST00000570324 SOWAHBA6NEL2 793 aa10.48□□□□□ -0.73
NPLOC4-204ENST00000570324 DHX16O60231 1041 aaKnown RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 141.4 ms