RNA–Protein interactions for RNA: ENST00000570287.6

TCF4-246, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 3,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-246ENST00000570287 SSR1P43307 286 aaKnown RBP9.12□□□□□ -0.95
TCF4-246ENST00000570287 ATN1P54259 1190 aaPredicted RBP9.12□□□□□ -0.95
TCF4-246ENST00000570287 TPD52L1Q16890 204 aaPredicted RBP9.12□□□□□ -0.95
TCF4-246ENST00000570287 CCDC93Q567U6 631 aa9.12□□□□□ -0.95
TCF4-246ENST00000570287 HOMER1Q86YM7 354 aa9.12□□□□□ -0.95
TCF4-246ENST00000570287 TTLL11Q8NHH1 800 aa9.12□□□□□ -0.95
TCF4-246ENST00000570287 OSBP2Q969R2 916 aa9.12□□□□□ -0.95
TCF4-246ENST00000570287 SLC4A9Q96Q91 983 aa9.12□□□□□ -0.95
TCF4-246ENST00000570287 NAP1L4Q99733 375 aaKnown RBP9.12□□□□□ -0.95
TCF4-246ENST00000570287 BRMS1Q9HCU9 246 aa9.12□□□□□ -0.95
TCF4-246ENST00000570287 MYH3P11055 1940 aa9.12□□□□□ -0.95
TCF4-246ENST00000570287 WNK3Q9BYP7 1800 aa9.11□□□□□ -0.95
TCF4-246ENST00000570287 A0A1W2PRU2 124 aa9.11□□□□□ -0.95
TCF4-246ENST00000570287 ANKRD18BA2A2Z9 1011 aa9.11□□□□□ -0.95
TCF4-246ENST00000570287 PNMA6AP0CW24 399 aaPredicted RBP9.11□□□□□ -0.95
TCF4-246ENST00000570287 ITGA6P23229 1130 aa9.11□□□□□ -0.95
TCF4-246ENST00000570287 CTHP32929 405 aa9.11□□□□□ -0.95
TCF4-246ENST00000570287 CTSWP56202 376 aa9.11□□□□□ -0.95
TCF4-246ENST00000570287 CT47A1Q5JQC4 288 aaPredicted RBP9.11□□□□□ -0.95
TCF4-246ENST00000570287 MYO1HQ8N1T3 1032 aa9.11□□□□□ -0.95
TCF4-246ENST00000570287 IQUBQ8NA54 791 aa9.11□□□□□ -0.95
TCF4-246ENST00000570287 TTC8Q8TAM2 541 aa9.11□□□□□ -0.95
TCF4-246ENST00000570287 ENOX1Q8TC92 643 aaKnown RBP9.11□□□□□ -0.95
TCF4-246ENST00000570287 ITFG2Q969R8 447 aa9.11□□□□□ -0.95
TCF4-246ENST00000570287 ZNF274Q96GC6 653 aaPredicted RBP9.11□□□□□ -0.95
TCF4-246ENST00000570287 H3BQV1 296 aa9.11□□□□□ -0.95
TCF4-246ENST00000570287 EIF1AYO14602 144 aaKnown RBP9.11□□□□□ -0.95
TCF4-246ENST00000570287 ATP8B1O43520 1251 aa9.11□□□□□ -0.95
TCF4-246ENST00000570287 CAND2O75155 1236 aa9.11□□□□□ -0.95
TCF4-246ENST00000570287 ASMTLO95671 621 aa9.11□□□□□ -0.95
TCF4-246ENST00000570287 GPTP24298 496 aa9.11□□□□□ -0.95
TCF4-246ENST00000570287 IL6STP40189 918 aaPredicted RBP9.11□□□□□ -0.95
TCF4-246ENST00000570287 RESTQ13127 1097 aa9.11□□□□□ -0.95
TCF4-246ENST00000570287 METTL24Q5JXM2 366 aa9.11□□□□□ -0.95
TCF4-246ENST00000570287 IFFO2Q5TF58 517 aa9.11□□□□□ -0.95
TCF4-246ENST00000570287 BLOC1S3Q6QNY0 202 aa9.11□□□□□ -0.95
TCF4-246ENST00000570287 SARM1Q6SZW1 724 aa9.11□□□□□ -0.95
TCF4-246ENST00000570287 LDHAL6AQ6ZMR3 332 aa9.11□□□□□ -0.95
TCF4-246ENST00000570287 ERMP1Q7Z2K6 904 aa9.11□□□□□ -0.95
TCF4-246ENST00000570287 LRRC8AQ8IWT6 810 aa9.11□□□□□ -0.95
TCF4-246ENST00000570287 TIFAQ96CG3 184 aa9.11□□□□□ -0.95
TCF4-246ENST00000570287 LRRC2Q9BYS8 371 aa9.11□□□□□ -0.95
TCF4-246ENST00000570287 LZTS1Q9Y250 596 aa9.11□□□□□ -0.95
TCF4-246ENST00000570287 SLC27A5Q9Y2P5 690 aa9.11□□□□□ -0.95
TCF4-246ENST00000570287 NUP98P52948 1817 aa9.1□□□□□ -0.95
TCF4-246ENST00000570287 NUDT7P0C024 238 aa9.1□□□□□ -0.95
TCF4-246ENST00000570287 CASQ1P31415 396 aa9.1□□□□□ -0.95
TCF4-246ENST00000570287 NAA16Q6N069 864 aaPredicted RBP9.1□□□□□ -0.95
TCF4-246ENST00000570287 C16orf86Q6ZW13 317 aa9.1□□□□□ -0.95
TCF4-246ENST00000570287 PDILTQ8N807 584 aa9.1□□□□□ -0.95
TCF4-246ENST00000570287 NSUN7Q8NE18 718 aaKnown RBP9.1□□□□□ -0.95
TCF4-246ENST00000570287 VPS37AQ8NEZ2 397 aa9.1□□□□□ -0.95
TCF4-246ENST00000570287 EPS8L3Q8TE67 593 aaKnown RBP9.1□□□□□ -0.95
TCF4-246ENST00000570287 LEO1Q8WVC0 666 aaPredicted RBP9.1□□□□□ -0.95
TCF4-246ENST00000570287 GREM2Q9H772 168 aa9.1□□□□□ -0.95
TCF4-246ENST00000570287 ZBTB1Q9Y2K1 713 aa9.1□□□□□ -0.95
TCF4-246ENST00000570287 MRPS23Q9Y3D9 190 aaKnown RBP9.1□□□□□ -0.95
TCF4-246ENST00000570287 NUB1Q9Y5A7 615 aa9.1□□□□□ -0.95
TCF4-246ENST00000570287 COL16A1Q07092 1604 aaPredicted RBP9.1□□□□□ -0.95
TCF4-246ENST00000570287 AHDC1Q5TGY3 1603 aaPredicted RBP9.1□□□□□ -0.95
TCF4-246ENST00000570287 MYH7P12883 1935 aa9.1□□□□□ -0.95
TCF4-246ENST00000570287 KIF2AO00139 706 aaPredicted RBP9.1□□□□□ -0.95
TCF4-246ENST00000570287 MYO1CO00159 1063 aa9.1□□□□□ -0.95
TCF4-246ENST00000570287 MYL1P05976 194 aa9.1□□□□□ -0.95
TCF4-246ENST00000570287 POLD1P28340 1107 aa9.1□□□□□ -0.95
TCF4-246ENST00000570287 ZAP70P43403 619 aa9.1□□□□□ -0.95
TCF4-246ENST00000570287 TYRO3Q06418 890 aa9.1□□□□□ -0.95
TCF4-246ENST00000570287 APOBRQ0VD83 1088 aa9.1□□□□□ -0.95
TCF4-246ENST00000570287 INO80DQ53TQ3 878 aaPredicted RBP9.1□□□□□ -0.95
TCF4-246ENST00000570287 ICE2Q659A1 982 aa9.1□□□□□ -0.95
TCF4-246ENST00000570287 FAM173BQ6P4H8 233 aa9.1□□□□□ -0.95
TCF4-246ENST00000570287 SYT10Q6XYQ8 523 aa9.1□□□□□ -0.95
TCF4-246ENST00000570287 GET4Q7L5D6 327 aaPredicted RBP9.1□□□□□ -0.95
TCF4-246ENST00000570287 CCDC144CPQ8IYA2 1237 aa9.1□□□□□ -0.95
TCF4-246ENST00000570287 CTDP1Q9Y5B0 961 aaPredicted RBP9.1□□□□□ -0.95
TCF4-246ENST00000570287 GOLGA6L4A6NEF3 574 aa9.1□□□□□ -0.95
TCF4-246ENST00000570287 USP27XA6NNY8 438 aa9.1□□□□□ -0.95
TCF4-246ENST00000570287 MINDY4BA8MYZ0 360 aa9.1□□□□□ -0.95
TCF4-246ENST00000570287 GALR2O43603 387 aaPredicted RBP9.1□□□□□ -0.95
TCF4-246ENST00000570287 PDE8AO60658 829 aa9.1□□□□□ -0.95
TCF4-246ENST00000570287 EIF4BP23588 611 aaKnown RBP9.1□□□□□ -0.95
TCF4-246ENST00000570287 EVCP57679 992 aa9.1□□□□□ -0.95
TCF4-246ENST00000570287 SCARF1Q14162 830 aa9.1□□□□□ -0.95
TCF4-246ENST00000570287 IMMTQ16891 758 aaKnown RBP9.1□□□□□ -0.95
TCF4-246ENST00000570287 ARSHQ5FYA8 562 aa9.1□□□□□ -0.95
TCF4-246ENST00000570287 LUZP1Q86V48 1076 aa9.1□□□□□ -0.95
TCF4-246ENST00000570287 SYNE4Q8N205 404 aa9.1□□□□□ -0.95
TCF4-246ENST00000570287 MSL3Q8N5Y2 521 aaKnown RBP9.1□□□□□ -0.95
TCF4-246ENST00000570287 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.1□□□□□ -0.952e-6■■■■■ 33.9
TCF4-246ENST00000570287 CBX8Q9HC52 389 aa9.1□□□□□ -0.95
TCF4-246ENST00000570287 CNNM1Q9NRU3 951 aa9.1□□□□□ -0.95
TCF4-246ENST00000570287 PCDH10Q9P2E7 1040 aa9.1□□□□□ -0.95
TCF4-246ENST00000570287 TRMT112Q9UI30 125 aaKnown RBP9.1□□□□□ -0.95
TCF4-246ENST00000570287 CFAP45Q9UL16 551 aa9.1□□□□□ -0.95
TCF4-246ENST00000570287 PTPN14Q15678 1187 aa9.09□□□□□ -0.95
TCF4-246ENST00000570287 ERAP2Q6P179 960 aa9.09□□□□□ -0.95
TCF4-246ENST00000570287 SPATC1Q76KD6 591 aa9.09□□□□□ -0.95
TCF4-246ENST00000570287 DZIP3Q86Y13 1208 aaKnown RBP9.09□□□□□ -0.95
TCF4-246ENST00000570287 SAMD3Q8N6K7 520 aa9.09□□□□□ -0.95
TCF4-246ENST00000570287 VGLL2Q8N8G2 317 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms