RNA–Protein interactions for RNA: ENST00000570253.5

PKD1-240, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-240ENST00000570253 LRRC47Q8N1G4 583 aaKnown RBP25.06■■□□□ 1.6
PKD1-240ENST00000570253 KLHDC9Q8NEP7 349 aa25.06■■□□□ 1.6
PKD1-240ENST00000570253 MYLIPQ8WY64 445 aa25.06■■□□□ 1.6
PKD1-240ENST00000570253 NAPBQ9H115 298 aa25.06■■□□□ 1.6
PKD1-240ENST00000570253 EPB41L4AQ9HCS5 686 aaPredicted RBP25.06■■□□□ 1.6
PKD1-240ENST00000570253 HSFX4A0A1B0GTS1 333 aaPredicted RBP25.05■■□□□ 1.6
PKD1-240ENST00000570253 HSFX3A0A1B0GWH4 333 aaPredicted RBP25.05■■□□□ 1.6
PKD1-240ENST00000570253 ITGB8P26012 769 aa25.05■■□□□ 1.6
PKD1-240ENST00000570253 STAT2P52630 851 aa25.05■■□□□ 1.6
PKD1-240ENST00000570253 SLFN13Q68D06 897 aa25.05■■□□□ 1.6
PKD1-240ENST00000570253 CHURC1Q8WUH1 139 aa25.05■■□□□ 1.6
PKD1-240ENST00000570253 ACAD9Q9H845 621 aa25.05■■□□□ 1.6
PKD1-240ENST00000570253 A0A0U1RQG5 324 aaPredicted RBP25.04■■□□□ 1.6
PKD1-240ENST00000570253 TIMP1P01033 207 aa25.04■■□□□ 1.6
PKD1-240ENST00000570253 PPIGQ13427 754 aaKnown RBP eCLIP25.04■■□□□ 1.6
PKD1-240ENST00000570253 CCDC144BQ3MJ40 725 aa25.04■■□□□ 1.6
PKD1-240ENST00000570253 C20orf194Q5TEA3 1177 aa25.04■■□□□ 1.6
PKD1-240ENST00000570253 TSHZ3Q63HK5 1081 aa25.04■■□□□ 1.6
PKD1-240ENST00000570253 ARMCX2Q7L311 632 aa25.04■■□□□ 1.6
PKD1-240ENST00000570253 FAM160B2Q86V87 743 aa25.04■■□□□ 1.6
PKD1-240ENST00000570253 HOMER2Q9NSB8 354 aa25.04■■□□□ 1.6
PKD1-240ENST00000570253 TTC41PQ6P2S7 1318 aa25.04■■□□□ 1.6
PKD1-240ENST00000570253 UNC80Q8N2C7 3258 aa25.03■■□□□ 1.6
PKD1-240ENST00000570253 TMEM232C9JQI7 657 aa25.03■■□□□ 1.6
PKD1-240ENST00000570253 M0R2C6 588 aa25.03■■□□□ 1.6
PKD1-240ENST00000570253 ASGR1P07306 291 aa25.03■■□□□ 1.6
PKD1-240ENST00000570253 GNASQ5JWF2 1037 aa25.03■■□□□ 1.6
PKD1-240ENST00000570253 NOL8Q76FK4 1167 aaKnown RBP25.03■■□□□ 1.6
PKD1-240ENST00000570253 NEDD1Q8NHV4 660 aa25.03■■□□□ 1.6
PKD1-240ENST00000570253 FSD1Q9BTV5 496 aa25.03■■□□□ 1.6
PKD1-240ENST00000570253 TTYH1Q9H313 450 aaPredicted RBP25.03■■□□□ 1.6
PKD1-240ENST00000570253 ZBTB47Q9UFB7 747 aaPredicted RBP25.03■■□□□ 1.6
PKD1-240ENST00000570253 PLIN4Q96Q06 1357 aa25.03■■□□□ 1.6
PKD1-240ENST00000570253 GJA9P57773 515 aa25.02■■□□□ 1.6
PKD1-240ENST00000570253 TKFCQ3LXA3 575 aa25.02■■□□□ 1.6
PKD1-240ENST00000570253 TMEM199Q8N511 208 aa25.02■■□□□ 1.6
PKD1-240ENST00000570253 ASB14A6NK59 587 aa25.01■■□□□ 1.59
PKD1-240ENST00000570253 SLC1A4P43007 532 aa25.01■■□□□ 1.59
PKD1-240ENST00000570253 EPHB4P54760 987 aa25.01■■□□□ 1.59
PKD1-240ENST00000570253 TFAP4Q01664 338 aa25.01■■□□□ 1.59
PKD1-240ENST00000570253 CCSAPQ6IQ19 270 aaPredicted RBP25.01■■□□□ 1.59
PKD1-240ENST00000570253 MFSD5Q6N075 450 aa25.01■■□□□ 1.59
PKD1-240ENST00000570253 CCDC144CPQ8IYA2 1237 aa25.01■■□□□ 1.59
PKD1-240ENST00000570253 UPF3AQ9H1J1 476 aaKnown RBP25.01■■□□□ 1.59
PKD1-240ENST00000570253 ARVCFO00192 962 aa25■■□□□ 1.59
PKD1-240ENST00000570253 DNAJB2P25686 324 aa25■■□□□ 1.59
PKD1-240ENST00000570253 PPARAQ07869 468 aa25■■□□□ 1.59
PKD1-240ENST00000570253 GMCL1Q96IK5 515 aa25■■□□□ 1.59
PKD1-240ENST00000570253 RNF146Q9NTX7 359 aa25■■□□□ 1.59
PKD1-240ENST00000570253 TBX21Q9UL17 535 aa25■■□□□ 1.59
PKD1-240ENST00000570253 MCM3APO60318 1980 aa25■■□□□ 1.59
PKD1-240ENST00000570253 MYADML2A6NDP7 307 aa24.99■■□□□ 1.59
PKD1-240ENST00000570253 TSPY2A6NKD2 308 aa24.99■■□□□ 1.59
PKD1-240ENST00000570253 ZEB2O60315 1214 aa24.99■■□□□ 1.59
PKD1-240ENST00000570253 CCDC129Q6ZRS4 1044 aa24.99■■□□□ 1.59
PKD1-240ENST00000570253 STAG1Q8WVM7 1258 aa24.99■■□□□ 1.59
PKD1-240ENST00000570253 STX8Q9UNK0 236 aa24.99■■□□□ 1.59
PKD1-240ENST00000570253 TNFAIP2Q03169 654 aa24.98■■□□□ 1.59
PKD1-240ENST00000570253 PSRC1Q6PGN9 363 aaPredicted RBP24.98■■□□□ 1.59
PKD1-240ENST00000570253 SYMPKQ92797 1274 aaKnown RBP24.98■■□□□ 1.59
PKD1-240ENST00000570253 AP5M1Q9H0R1 490 aa24.98■■□□□ 1.59
PKD1-240ENST00000570253 MTIF3Q9H2K0 278 aaKnown RBP24.98■■□□□ 1.59
PKD1-240ENST00000570253 CABYRO75952 493 aa24.97■■□□□ 1.59
PKD1-240ENST00000570253 ALAS1P13196 640 aa24.97■■□□□ 1.59
PKD1-240ENST00000570253 CDK7P50613 346 aa24.97■■□□□ 1.59
PKD1-240ENST00000570253 TIFAQ96CG3 184 aa24.97■■□□□ 1.59
PKD1-240ENST00000570253 TRERF1Q96PN7 1200 aa24.97■■□□□ 1.59
PKD1-240ENST00000570253 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.97■■□□□ 1.59
PKD1-240ENST00000570253 PLA2G6O60733 806 aa24.96■■□□□ 1.59
PKD1-240ENST00000570253 MCCP23508 829 aa24.96■■□□□ 1.59
PKD1-240ENST00000570253 GAS2L1Q99501 681 aaPredicted RBP24.96■■□□□ 1.59
PKD1-240ENST00000570253 SEZ6LQ9BYH1 1024 aa24.96■■□□□ 1.59
PKD1-240ENST00000570253 PPP1R12CQ9BZL4 782 aa24.96■■□□□ 1.59
PKD1-240ENST00000570253 A1CFQ9NQ94 594 aaKnown RBP24.96■■□□□ 1.59
PKD1-240ENST00000570253 CNTN2Q02246 1040 aa24.95■■□□□ 1.58
PKD1-240ENST00000570253 ZMYM1Q5SVZ6 1142 aa24.95■■□□□ 1.58
PKD1-240ENST00000570253 FAM133AQ8N9E0 248 aa24.95■■□□□ 1.58
PKD1-240ENST00000570253 FGD4Q96M96 766 aa24.95■■□□□ 1.58
PKD1-240ENST00000570253 AGBL1Q96MI9 1066 aa24.95■■□□□ 1.58
PKD1-240ENST00000570253 SEC62Q99442 399 aaKnown RBP24.95■■□□□ 1.58
PKD1-240ENST00000570253 ZNF576Q9H609 170 aa24.95■■□□□ 1.58
PKD1-240ENST00000570253 ADCY6O43306 1168 aa24.94■■□□□ 1.58
PKD1-240ENST00000570253 RCSD1Q6JBY9 416 aa24.94■■□□□ 1.58
PKD1-240ENST00000570253 TLK2Q86UE8 772 aa24.94■■□□□ 1.58
PKD1-240ENST00000570253 FAM126BQ8IXS8 530 aa24.94■■□□□ 1.58
PKD1-240ENST00000570253 CSF2RAP15509 400 aa24.93■■□□□ 1.58
PKD1-240ENST00000570253 MX1P20591 662 aa24.93■■□□□ 1.58
PKD1-240ENST00000570253 KCTD1Q719H9 257 aa24.93■■□□□ 1.58
PKD1-240ENST00000570253 CHMP4CQ96CF2 233 aa24.93■■□□□ 1.58
PKD1-240ENST00000570253 RANBP6O60518 1105 aaKnown RBP24.92■■□□□ 1.58
PKD1-240ENST00000570253 NKX3-2P78367 333 aa24.92■■□□□ 1.58
PKD1-240ENST00000570253 IRX5P78411 483 aaPredicted RBP24.92■■□□□ 1.58
PKD1-240ENST00000570253 BEX3Q00994 111 aa24.92■■□□□ 1.58
PKD1-240ENST00000570253 GRIN2CQ14957 1233 aa24.92■■□□□ 1.58
PKD1-240ENST00000570253 CCDC96Q2M329 555 aa24.92■■□□□ 1.58
PKD1-240ENST00000570253 TMEM240Q5SV17 173 aa24.92■■□□□ 1.58
PKD1-240ENST00000570253 PI4K2BQ8TCG2 481 aa24.92■■□□□ 1.58
PKD1-240ENST00000570253 KATNBL1Q9H079 304 aa24.92■■□□□ 1.58
PKD1-240ENST00000570253 MSRAQ9UJ68 235 aa24.92■■□□□ 1.58
PKD1-240ENST00000570253 CCPG1Q9ULG6 757 aa24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms