RNA–Protein interactions for RNA: ENST00000569804.2

LPCAT4-208, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 2

Gene LPCAT4, Length 657 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-208ENST00000569804 PCSK9Q8NBP7 692 aaKnown RBP12.86□□□□□ -0.35
LPCAT4-208ENST00000569804 KIF1BPQ96EK5 621 aa12.86□□□□□ -0.35
LPCAT4-208ENST00000569804 UHRF1Q96T88 793 aaPredicted RBP12.86□□□□□ -0.35
LPCAT4-208ENST00000569804 PUS7LQ9H0K6 701 aaKnown RBP12.86□□□□□ -0.35
LPCAT4-208ENST00000569804 WNT8AQ9H1J5 351 aa12.86□□□□□ -0.35
LPCAT4-208ENST00000569804 NKX2-4Q9H2Z4 354 aa12.86□□□□□ -0.35
LPCAT4-208ENST00000569804 ABHD16BQ9H3Z7 469 aa12.86□□□□□ -0.35
LPCAT4-208ENST00000569804 SLC38A10Q9HBR0 1119 aa12.86□□□□□ -0.35
LPCAT4-208ENST00000569804 IL23AQ9NPF7 189 aa12.86□□□□□ -0.35
LPCAT4-208ENST00000569804 NYAP2Q9P242 653 aa12.86□□□□□ -0.35
LPCAT4-208ENST00000569804 SCN5AQ14524 2016 aa12.86□□□□□ -0.35
LPCAT4-208ENST00000569804 GRIN2DO15399 1336 aa12.86□□□□□ -0.35
LPCAT4-208ENST00000569804 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.85□□□□□ -0.35
LPCAT4-208ENST00000569804 F5H6K3 240 aa12.85□□□□□ -0.35
LPCAT4-208ENST00000569804 ATP5JP18859 108 aa12.85□□□□□ -0.35
LPCAT4-208ENST00000569804 KLRC3Q07444 240 aa12.85□□□□□ -0.35
LPCAT4-208ENST00000569804 RAB30Q15771 203 aa12.85□□□□□ -0.35
LPCAT4-208ENST00000569804 HSP90AB4PQ58FF6 505 aa12.85□□□□□ -0.35
LPCAT4-208ENST00000569804 CCDC174Q6PII3 467 aa12.85□□□□□ -0.35
LPCAT4-208ENST00000569804 DDX11Q96FC9 970 aa12.85□□□□□ -0.35
LPCAT4-208ENST00000569804 NECAB3Q96P71 396 aaPredicted RBP12.85□□□□□ -0.35
LPCAT4-208ENST00000569804 HAUS7Q99871 368 aa12.85□□□□□ -0.35
LPCAT4-208ENST00000569804 BOLA2Q9H3K6 86 aa12.85□□□□□ -0.35
LPCAT4-208ENST00000569804 RAVER2Q9HCJ3 691 aaKnown RBP12.85□□□□□ -0.35
LPCAT4-208ENST00000569804 GNEQ9Y223 722 aaKnown RBP12.85□□□□□ -0.35
LPCAT4-208ENST00000569804 TANC1Q9C0D5 1861 aa12.85□□□□□ -0.35
LPCAT4-208ENST00000569804 BEX3Q00994 111 aa12.84□□□□□ -0.35
LPCAT4-208ENST00000569804 CCDC85BQ15834 202 aaPredicted RBP12.84□□□□□ -0.35
LPCAT4-208ENST00000569804 SBK1Q52WX2 424 aa12.84□□□□□ -0.35
LPCAT4-208ENST00000569804 GNASQ5JWF2 1037 aa12.84□□□□□ -0.35
LPCAT4-208ENST00000569804 CCDC144CPQ8IYA2 1237 aa12.84□□□□□ -0.35
LPCAT4-208ENST00000569804 FAM133AQ8N9E0 248 aa12.84□□□□□ -0.35
LPCAT4-208ENST00000569804 PRPF38AQ8NAV1 312 aaKnown RBP12.84□□□□□ -0.35
LPCAT4-208ENST00000569804 PANK1Q8TE04 598 aa12.84□□□□□ -0.35
LPCAT4-208ENST00000569804 ARPP21Q9UBL0 812 aaPredicted RBP12.84□□□□□ -0.35
LPCAT4-208ENST00000569804 SLC4A4Q9Y6R1 1079 aa12.84□□□□□ -0.35
LPCAT4-208ENST00000569804 PTPRSQ13332 1948 aa12.84□□□□□ -0.35
LPCAT4-208ENST00000569804 SCN10AQ9Y5Y9 1956 aa12.83□□□□□ -0.35
LPCAT4-208ENST00000569804 PLIN4Q96Q06 1357 aa12.83□□□□□ -0.36
LPCAT4-208ENST00000569804 APBB1O00213 710 aa12.83□□□□□ -0.36
LPCAT4-208ENST00000569804 RAD21O60216 631 aa12.83□□□□□ -0.36
LPCAT4-208ENST00000569804 IFIT2P09913 472 aaKnown RBP12.83□□□□□ -0.36
LPCAT4-208ENST00000569804 BMP1P13497 986 aa12.83□□□□□ -0.36
LPCAT4-208ENST00000569804 OAZ1P54368 228 aa12.83□□□□□ -0.36
LPCAT4-208ENST00000569804 CNTN2Q02246 1040 aa12.83□□□□□ -0.36
LPCAT4-208ENST00000569804 CXCL17Q6UXB2 119 aa12.83□□□□□ -0.36
LPCAT4-208ENST00000569804 CPXCR1Q8N123 301 aa12.83□□□□□ -0.36
LPCAT4-208ENST00000569804 NOC4LQ9BVI4 516 aaKnown RBP12.83□□□□□ -0.36
LPCAT4-208ENST00000569804 HIPK3Q9H422 1215 aa12.83□□□□□ -0.36
LPCAT4-208ENST00000569804 EPB41L4AQ9HCS5 686 aaPredicted RBP12.83□□□□□ -0.36
LPCAT4-208ENST00000569804 MSRAQ9UJ68 235 aa12.83□□□□□ -0.36
LPCAT4-208ENST00000569804 ZNF536O15090 1300 aa12.83□□□□□ -0.36
LPCAT4-208ENST00000569804 COL4A4P53420 1690 aaPredicted RBP12.83□□□□□ -0.36
LPCAT4-208ENST00000569804 TET1Q8NFU7 2136 aa12.82□□□□□ -0.36
LPCAT4-208ENST00000569804 PIEZO1Q92508 2521 aa12.82□□□□□ -0.36
LPCAT4-208ENST00000569804 GSG1L2A8MUP6 293 aa12.82□□□□□ -0.36
LPCAT4-208ENST00000569804 TLR3O15455 904 aaKnown RBP12.82□□□□□ -0.36
LPCAT4-208ENST00000569804 B4GALT4O60513 344 aa12.82□□□□□ -0.36
LPCAT4-208ENST00000569804 MYOGP15173 224 aa12.82□□□□□ -0.36
LPCAT4-208ENST00000569804 IGFBP4P22692 258 aa12.82□□□□□ -0.36
LPCAT4-208ENST00000569804 RABGGTBP53611 331 aa12.82□□□□□ -0.36
LPCAT4-208ENST00000569804 TFF2Q03403 129 aa12.82□□□□□ -0.36
LPCAT4-208ENST00000569804 OTOP2Q7RTS6 562 aa12.82□□□□□ -0.36
LPCAT4-208ENST00000569804 TLK2Q86UE8 772 aa12.82□□□□□ -0.36
LPCAT4-208ENST00000569804 AMOTL1Q8IY63 956 aa12.82□□□□□ -0.36
LPCAT4-208ENST00000569804 CHST13Q8NET6 341 aa12.82□□□□□ -0.36
LPCAT4-208ENST00000569804 MKL1Q969V6 931 aa12.82□□□□□ -0.36
LPCAT4-208ENST00000569804 KIFC2Q96AC6 838 aa12.82□□□□□ -0.36
LPCAT4-208ENST00000569804 AGBL1Q96MI9 1066 aa12.82□□□□□ -0.36
LPCAT4-208ENST00000569804 STRBPQ96SI9 672 aaKnown RBP12.82□□□□□ -0.36
LPCAT4-208ENST00000569804 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.82□□□□□ -0.362e-8■■■■■ 43.8
LPCAT4-208ENST00000569804 SPC25Q9HBM1 224 aa12.82□□□□□ -0.36
LPCAT4-208ENST00000569804 A1CFQ9NQ94 594 aaKnown RBP12.82□□□□□ -0.36
LPCAT4-208ENST00000569804 FBXO40Q9UH90 709 aa12.82□□□□□ -0.36
LPCAT4-208ENST00000569804 DDX49Q9Y6V7 483 aaKnown RBP12.82□□□□□ -0.36
LPCAT4-208ENST00000569804 SOWAHBA6NEL2 793 aa12.81□□□□□ -0.36
LPCAT4-208ENST00000569804 FGBP02675 491 aa12.81□□□□□ -0.36
LPCAT4-208ENST00000569804 HOXD11P31277 338 aaPredicted RBP12.81□□□□□ -0.36
LPCAT4-208ENST00000569804 CCL23P55773 120 aa12.81□□□□□ -0.36
LPCAT4-208ENST00000569804 ITGA7Q13683 1181 aa12.81□□□□□ -0.36
LPCAT4-208ENST00000569804 TMEM63BQ5T3F8 832 aa12.81□□□□□ -0.36
LPCAT4-208ENST00000569804 ANKRD35Q8N283 1001 aa12.81□□□□□ -0.36
LPCAT4-208ENST00000569804 GMCL1P1Q8NEA9 526 aa12.81□□□□□ -0.36
LPCAT4-208ENST00000569804 CEP95Q96GE4 821 aa12.81□□□□□ -0.36
LPCAT4-208ENST00000569804 SLC28A3Q9HAS3 691 aa12.81□□□□□ -0.36
LPCAT4-208ENST00000569804 SYNPO2Q9UMS6 1093 aa12.81□□□□□ -0.36
LPCAT4-208ENST00000569804 EPOPA6NHQ4 379 aa12.8□□□□□ -0.36
LPCAT4-208ENST00000569804 ZBED4O75132 1171 aa12.8□□□□□ -0.36
LPCAT4-208ENST00000569804 ARHGEF15O94989 841 aa12.8□□□□□ -0.36
LPCAT4-208ENST00000569804 SMPD1P17405 629 aa12.8□□□□□ -0.36
LPCAT4-208ENST00000569804 POU3F3P20264 500 aaPredicted RBP12.8□□□□□ -0.36
LPCAT4-208ENST00000569804 KCNQ1P51787 676 aa12.8□□□□□ -0.36
LPCAT4-208ENST00000569804 TNFAIP2Q03169 654 aa12.8□□□□□ -0.36
LPCAT4-208ENST00000569804 FSCN1Q16658 493 aaKnown RBP12.8□□□□□ -0.36
LPCAT4-208ENST00000569804 RPAP2Q8IXW5 612 aaPredicted RBP12.8□□□□□ -0.36
LPCAT4-208ENST00000569804 LRRC47Q8N1G4 583 aaKnown RBP12.8□□□□□ -0.36
LPCAT4-208ENST00000569804 OSBP2Q969R2 916 aa12.8□□□□□ -0.36
LPCAT4-208ENST00000569804 VTI1AQ96AJ9 217 aa12.8□□□□□ -0.36
LPCAT4-208ENST00000569804 DDRGK1Q96HY6 314 aa12.8□□□□□ -0.36
LPCAT4-208ENST00000569804 TRPV6Q9H1D0 765 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms