RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 PLEKHM2Q8IWE5 1019 aa16.42■□□□□ 0.22
GTF3C1-211ENST00000569653 TRIM43Q96BQ3 446 aaPredicted RBP16.42■□□□□ 0.22
GTF3C1-211ENST00000569653 DDX11Q96FC9 970 aa16.42■□□□□ 0.22
GTF3C1-211ENST00000569653 STX8Q9UNK0 236 aa16.42■□□□□ 0.22
GTF3C1-211ENST00000569653 A0A1W2PQ45 241 aaPredicted RBP16.41■□□□□ 0.22
GTF3C1-211ENST00000569653 A0A1W2PQY0 241 aa16.41■□□□□ 0.22
GTF3C1-211ENST00000569653 SOWAHBA6NEL2 793 aa16.41■□□□□ 0.22
GTF3C1-211ENST00000569653 TSPY2A6NKD2 308 aa16.41■□□□□ 0.22
GTF3C1-211ENST00000569653 RANBP6O60518 1105 aaKnown RBP16.41■□□□□ 0.22
GTF3C1-211ENST00000569653 SLC3A2P08195 630 aaKnown RBP16.41■□□□□ 0.22
GTF3C1-211ENST00000569653 SLC1A4P43007 532 aa16.41■□□□□ 0.22
GTF3C1-211ENST00000569653 STAT2P52630 851 aa16.41■□□□□ 0.22
GTF3C1-211ENST00000569653 HAND2P61296 217 aa16.41■□□□□ 0.22
GTF3C1-211ENST00000569653 TLE2Q04725 743 aa16.41■□□□□ 0.22
GTF3C1-211ENST00000569653 MCMDC2Q4G0Z9 681 aa16.41■□□□□ 0.22
GTF3C1-211ENST00000569653 MUM1L1Q5H9M0 696 aa16.41■□□□□ 0.22
GTF3C1-211ENST00000569653 C1orf53Q5VUE5 145 aa16.41■□□□□ 0.22
GTF3C1-211ENST00000569653 TTBK2Q6IQ55 1244 aa16.41■□□□□ 0.22
GTF3C1-211ENST00000569653 ZNF467Q7Z7K2 595 aaPredicted RBP16.41■□□□□ 0.22
GTF3C1-211ENST00000569653 TBC1D10CQ8IV04 446 aa16.41■□□□□ 0.22
GTF3C1-211ENST00000569653 FAM133AQ8N9E0 248 aa16.41■□□□□ 0.22
GTF3C1-211ENST00000569653 KLHDC9Q8NEP7 349 aa16.41■□□□□ 0.22
GTF3C1-211ENST00000569653 STAG1Q8WVM7 1258 aa16.41■□□□□ 0.22
GTF3C1-211ENST00000569653 A1CFQ9NQ94 594 aaKnown RBP16.41■□□□□ 0.22
GTF3C1-211ENST00000569653 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.41■□□□□ 0.22
GTF3C1-211ENST00000569653 ZHX1Q9UKY1 873 aaPredicted RBP16.41■□□□□ 0.22
GTF3C1-211ENST00000569653 PRR12Q9ULL5 1215 aa16.41■□□□□ 0.22
GTF3C1-211ENST00000569653 CTAGE5O15320 804 aa16.4■□□□□ 0.22
GTF3C1-211ENST00000569653 C9orf50Q5SZB4 431 aa16.4■□□□□ 0.22
GTF3C1-211ENST00000569653 RCSD1Q6JBY9 416 aa16.4■□□□□ 0.22
GTF3C1-211ENST00000569653 ARMCX2Q7L311 632 aa16.4■□□□□ 0.22
GTF3C1-211ENST00000569653 MSL3Q8N5Y2 521 aaKnown RBP16.4■□□□□ 0.22
GTF3C1-211ENST00000569653 CHST13Q8NET6 341 aa16.4■□□□□ 0.22
GTF3C1-211ENST00000569653 PURBQ96QR8 312 aaKnown RBP16.4■□□□□ 0.22
GTF3C1-211ENST00000569653 RNF146Q9NTX7 359 aa16.4■□□□□ 0.22
GTF3C1-211ENST00000569653 MTMR7Q9Y216 660 aa16.4■□□□□ 0.22
GTF3C1-211ENST00000569653 CNPY2Q9Y2B0 182 aa16.4■□□□□ 0.22
GTF3C1-211ENST00000569653 PLA2G6O60733 806 aa16.39■□□□□ 0.21
GTF3C1-211ENST00000569653 EPHB4P54760 987 aa16.39■□□□□ 0.21
GTF3C1-211ENST00000569653 NUCB1Q02818 461 aa16.39■□□□□ 0.21
GTF3C1-211ENST00000569653 ACVR2BQ13705 512 aa16.39■□□□□ 0.21
GTF3C1-211ENST00000569653 CCDC144BQ3MJ40 725 aa16.39■□□□□ 0.21
GTF3C1-211ENST00000569653 CCDC174Q6PII3 467 aa16.39■□□□□ 0.21
GTF3C1-211ENST00000569653 FAM160B2Q86V87 743 aa16.39■□□□□ 0.21
GTF3C1-211ENST00000569653 CCDC144CPQ8IYA2 1237 aa16.39■□□□□ 0.21
GTF3C1-211ENST00000569653 ANKRD35Q8N283 1001 aa16.39■□□□□ 0.21
GTF3C1-211ENST00000569653 BADQ92934 168 aa16.39■□□□□ 0.21
GTF3C1-211ENST00000569653 TMEM47Q9BQJ4 181 aa16.39■□□□□ 0.21
GTF3C1-211ENST00000569653 PRDM5Q9NQX1 630 aaPredicted RBP16.39■□□□□ 0.21
GTF3C1-211ENST00000569653 ISY1Q9ULR0 285 aaKnown RBP16.39■□□□□ 0.21
GTF3C1-211ENST00000569653 ZMYM6O95789 1325 aa16.39■□□□□ 0.21
GTF3C1-211ENST00000569653 CCDC171Q6TFL3 1326 aa16.39■□□□□ 0.21
GTF3C1-211ENST00000569653 UNC80Q8N2C7 3258 aa16.38■□□□□ 0.21
GTF3C1-211ENST00000569653 CDH23Q9H251 3354 aa16.38■□□□□ 0.21
GTF3C1-211ENST00000569653 SLC16A2P36021 539 aa16.38■□□□□ 0.21
GTF3C1-211ENST00000569653 ACLYP53396 1101 aa16.38■□□□□ 0.21
GTF3C1-211ENST00000569653 SHHQ15465 462 aa16.38■□□□□ 0.21
GTF3C1-211ENST00000569653 RRP12Q5JTH9 1297 aaKnown RBP16.38■□□□□ 0.21
GTF3C1-211ENST00000569653 TMEM63BQ5T3F8 832 aa16.38■□□□□ 0.21
GTF3C1-211ENST00000569653 GPR153Q6NV75 609 aa16.38■□□□□ 0.21
GTF3C1-211ENST00000569653 CHD1LQ86WJ1 897 aa16.38■□□□□ 0.21
GTF3C1-211ENST00000569653 DEFB123Q8N688 67 aa16.38■□□□□ 0.21
GTF3C1-211ENST00000569653 CHURC1Q8WUH1 139 aa16.38■□□□□ 0.21
GTF3C1-211ENST00000569653 IL25Q9H293 177 aa16.38■□□□□ 0.21
GTF3C1-211ENST00000569653 OSBPL3Q9H4L5 887 aa16.38■□□□□ 0.21
GTF3C1-211ENST00000569653 ACAD9Q9H845 621 aa16.38■□□□□ 0.21
GTF3C1-211ENST00000569653 ZBTB47Q9UFB7 747 aaPredicted RBP16.38■□□□□ 0.21
GTF3C1-211ENST00000569653 FBXO40Q9UH90 709 aa16.38■□□□□ 0.21
GTF3C1-211ENST00000569653 PRUNE2Q8WUY3 3088 aa16.38■□□□□ 0.21
GTF3C1-211ENST00000569653 NEDD4P46934 1319 aa16.38■□□□□ 0.21
GTF3C1-211ENST00000569653 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.37■□□□□ 0.21
GTF3C1-211ENST00000569653 TRIM6-TRIM34B2RNG4 842 aa16.37■□□□□ 0.21
GTF3C1-211ENST00000569653 DUSP11O75319 330 aaKnown RBP16.37■□□□□ 0.21
GTF3C1-211ENST00000569653 ALAS1P13196 640 aa16.37■□□□□ 0.21
GTF3C1-211ENST00000569653 SDSP20132 328 aa16.37■□□□□ 0.21
GTF3C1-211ENST00000569653 RNF180Q86T96 592 aa16.37■□□□□ 0.21
GTF3C1-211ENST00000569653 RILPL2Q969X0 211 aa16.37■□□□□ 0.21
GTF3C1-211ENST00000569653 LBHD1Q9BQE6 289 aaPredicted RBP16.37■□□□□ 0.21
GTF3C1-211ENST00000569653 UPF3AQ9H1J1 476 aaKnown RBP16.37■□□□□ 0.21
GTF3C1-211ENST00000569653 MTMR10Q9NXD2 777 aa16.37■□□□□ 0.21
GTF3C1-211ENST00000569653 FAM184BQ9ULE4 1060 aa16.37■□□□□ 0.21
GTF3C1-211ENST00000569653 CTDP1Q9Y5B0 961 aaPredicted RBP16.37■□□□□ 0.21
GTF3C1-211ENST00000569653 FRMPD2Q68DX3 1309 aaPredicted RBP16.37■□□□□ 0.21
GTF3C1-211ENST00000569653 PQBP1O60828 265 aaKnown RBP16.36■□□□□ 0.21
GTF3C1-211ENST00000569653 FDX1P10109 184 aa16.36■□□□□ 0.21
GTF3C1-211ENST00000569653 IKQ13123 557 aaPredicted RBP16.36■□□□□ 0.21
GTF3C1-211ENST00000569653 KCNA10Q16322 511 aa16.36■□□□□ 0.21
GTF3C1-211ENST00000569653 BTNL9Q6UXG8 535 aa16.36■□□□□ 0.21
GTF3C1-211ENST00000569653 DCAF4Q8WV16 495 aa16.36■□□□□ 0.21
GTF3C1-211ENST00000569653 TRERF1Q96PN7 1200 aa16.36■□□□□ 0.21
GTF3C1-211ENST00000569653 RANBP17Q9H2T7 1088 aaKnown RBP16.36■□□□□ 0.21
GTF3C1-211ENST00000569653 ABHD16BQ9H3Z7 469 aa16.36■□□□□ 0.21
GTF3C1-211ENST00000569653 TCP11L1Q9NUJ3 509 aa16.36■□□□□ 0.21
GTF3C1-211ENST00000569653 CYP39A1Q9NYL5 469 aa16.36■□□□□ 0.21
GTF3C1-211ENST00000569653 CHD9Q3L8U1 2897 aa16.36■□□□□ 0.21
GTF3C1-211ENST00000569653 POTEB2H3BUK9 544 aa16.35■□□□□ 0.21
GTF3C1-211ENST00000569653 KIAA0355O15063 1070 aa16.35■□□□□ 0.21
GTF3C1-211ENST00000569653 CST5P28325 142 aaPredicted RBP16.35■□□□□ 0.21
GTF3C1-211ENST00000569653 FAAP100Q0VG06 881 aa16.35■□□□□ 0.21
GTF3C1-211ENST00000569653 CCDC96Q2M329 555 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms