RNA–Protein interactions for RNA: ENST00000569380.5

SPSB3-211, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 1,781 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-211ENST00000569380 RESTQ13127 1097 aa23.53■■□□□ 1.36
SPSB3-211ENST00000569380 NPY5RQ15761 445 aa23.53■■□□□ 1.36
SPSB3-211ENST00000569380 CHURC1Q8WUH1 139 aa23.53■■□□□ 1.36
SPSB3-211ENST00000569380 HHIPL1Q96JK4 782 aa23.53■■□□□ 1.36
SPSB3-211ENST00000569380 COL13A1Q5TAT6 717 aaPredicted RBP23.52■■□□□ 1.36
SPSB3-211ENST00000569380 FAM160B2Q86V87 743 aa23.52■■□□□ 1.36
SPSB3-211ENST00000569380 ATG4CQ96DT6 458 aa23.52■■□□□ 1.36
SPSB3-211ENST00000569380 PHF20Q9BVI0 1012 aa23.52■■□□□ 1.36
SPSB3-211ENST00000569380 WBP1LQ9NX94 342 aa23.52■■□□□ 1.36
SPSB3-211ENST00000569380 BARHL2Q9NY43 387 aa23.52■■□□□ 1.36
SPSB3-211ENST00000569380 RBM27Q9P2N5 1060 aaKnown RBP23.52■■□□□ 1.36
SPSB3-211ENST00000569380 PEX10O60683 326 aa23.52■■□□□ 1.36
SPSB3-211ENST00000569380 MMP1P03956 469 aa23.52■■□□□ 1.36
SPSB3-211ENST00000569380 TRIM29Q14134 588 aa23.52■■□□□ 1.36
SPSB3-211ENST00000569380 CATSPERGQ6ZRH7 1159 aa23.52■■□□□ 1.36
SPSB3-211ENST00000569380 PPP1R9AQ9ULJ8 1098 aa23.52■■□□□ 1.36
SPSB3-211ENST00000569380 COL11A1P12107 1806 aaPredicted RBP23.52■■□□□ 1.36
SPSB3-211ENST00000569380 UNCXA6NJT0 531 aa23.51■■□□□ 1.35
SPSB3-211ENST00000569380 BTBD18B2RXH4 712 aa23.51■■□□□ 1.35
SPSB3-211ENST00000569380 PLA2G6O60733 806 aa23.51■■□□□ 1.35
SPSB3-211ENST00000569380 NR5A1Q13285 461 aa23.51■■□□□ 1.35
SPSB3-211ENST00000569380 USH1GQ495M9 461 aa23.51■■□□□ 1.35
SPSB3-211ENST00000569380 NOM1Q5C9Z4 860 aaKnown RBP23.51■■□□□ 1.35
SPSB3-211ENST00000569380 SPRYD7Q5W111 196 aa23.51■■□□□ 1.35
SPSB3-211ENST00000569380 RANBP17Q9H2T7 1088 aaKnown RBP23.51■■□□□ 1.35
SPSB3-211ENST00000569380 NAPAP54920 295 aa23.5■■□□□ 1.35
SPSB3-211ENST00000569380 NLRP5P59047 1200 aa23.5■■□□□ 1.35
SPSB3-211ENST00000569380 KIF23Q02241 960 aaPredicted RBP23.5■■□□□ 1.35
SPSB3-211ENST00000569380 GPAT2Q6NUI2 795 aa23.5■■□□□ 1.35
SPSB3-211ENST00000569380 MS4A4AQ96JQ5 239 aa23.5■■□□□ 1.35
SPSB3-211ENST00000569380 ZIC5Q96T25 663 aa23.5■■□□□ 1.35
SPSB3-211ENST00000569380 SNAPC2Q13487 334 aa23.5■■□□□ 1.35
SPSB3-211ENST00000569380 POTEEQ6S8J3 1075 aa23.5■■□□□ 1.35
SPSB3-211ENST00000569380 RASAL3Q86YV0 1011 aa23.5■■□□□ 1.35
SPSB3-211ENST00000569380 DIS3L2Q8IYB7 885 aaKnown RBP23.5■■□□□ 1.35
SPSB3-211ENST00000569380 PRPF38AQ8NAV1 312 aaKnown RBP23.5■■□□□ 1.35
SPSB3-211ENST00000569380 RASGRP4Q8TDF6 673 aa23.5■■□□□ 1.35
SPSB3-211ENST00000569380 FAM205CA6NFA0 338 aa23.49■■□□□ 1.35
SPSB3-211ENST00000569380 USP17L15C9J2P7 530 aa23.49■■□□□ 1.35
SPSB3-211ENST00000569380 USP17L13C9JLJ4 530 aa23.49■■□□□ 1.35
SPSB3-211ENST00000569380 USP17L11C9JVI0 530 aa23.49■■□□□ 1.35
SPSB3-211ENST00000569380 USP17L18D6R9N7 530 aa23.49■■□□□ 1.35
SPSB3-211ENST00000569380 USP17L22D6RA61 530 aa23.49■■□□□ 1.35
SPSB3-211ENST00000569380 USP17L17D6RBQ6 530 aa23.49■■□□□ 1.35
SPSB3-211ENST00000569380 USP17L19D6RCP7 530 aa23.49■■□□□ 1.35
SPSB3-211ENST00000569380 USP17L20D6RJB6 530 aa23.49■■□□□ 1.35
SPSB3-211ENST00000569380 ZNF157P51786 506 aaPredicted RBP23.49■■□□□ 1.35
SPSB3-211ENST00000569380 USP17L24Q0WX57 530 aa23.49■■□□□ 1.35
SPSB3-211ENST00000569380 ANP32EQ9BTT0 268 aa23.49■■□□□ 1.35
SPSB3-211ENST00000569380 ZNF536O15090 1300 aa23.49■■□□□ 1.35
SPSB3-211ENST00000569380 EARS2Q5JPH6 523 aaKnown RBP23.48■■□□□ 1.35
SPSB3-211ENST00000569380 RGMBQ6NW40 437 aa23.48■■□□□ 1.35
SPSB3-211ENST00000569380 FBXO11Q86XK2 927 aa23.48■■□□□ 1.35
SPSB3-211ENST00000569380 PROCA1Q8NCQ7 364 aaPredicted RBP23.48■■□□□ 1.35
SPSB3-211ENST00000569380 AGBL1Q96MI9 1066 aa23.48■■□□□ 1.35
SPSB3-211ENST00000569380 RAVER2Q9HCJ3 691 aaKnown RBP23.48■■□□□ 1.35
SPSB3-211ENST00000569380 PCDHA1Q9Y5I3 950 aa23.48■■□□□ 1.35
SPSB3-211ENST00000569380 SPDYE16A6NNV3 312 aaPredicted RBP23.47■■□□□ 1.35
SPSB3-211ENST00000569380 FAM155AB1AL88 458 aaPredicted RBP23.47■■□□□ 1.35
SPSB3-211ENST00000569380 DSG3P32926 999 aa23.47■■□□□ 1.35
SPSB3-211ENST00000569380 CPXCR1Q8N123 301 aa23.47■■□□□ 1.35
SPSB3-211ENST00000569380 BRI3BPQ8WY22 251 aa23.47■■□□□ 1.35
SPSB3-211ENST00000569380 AGTPBP1Q9UPW5 1226 aa23.47■■□□□ 1.35
SPSB3-211ENST00000569380 TCHHQ07283 1943 aa23.47■■□□□ 1.35
SPSB3-211ENST00000569380 SMCO2A6NFE2 343 aa23.47■■□□□ 1.35
SPSB3-211ENST00000569380 XBP1P17861 261 aa23.47■■□□□ 1.35
SPSB3-211ENST00000569380 MAP2K1Q02750 393 aaPredicted RBP23.47■■□□□ 1.35
SPSB3-211ENST00000569380 COG2Q14746 738 aa23.47■■□□□ 1.35
SPSB3-211ENST00000569380 AMNQ9BXJ7 453 aa23.47■■□□□ 1.35
SPSB3-211ENST00000569380 SH3GLB2Q9NR46 395 aa23.47■■□□□ 1.35
SPSB3-211ENST00000569380 MYH15Q9Y2K3 1946 aa23.46■■□□□ 1.35
SPSB3-211ENST00000569380 CCL15-CCL14A0A0B4J2E2 113 aa23.46■■□□□ 1.35
SPSB3-211ENST00000569380 VWA5AO00534 786 aa23.46■■□□□ 1.35
SPSB3-211ENST00000569380 CCL15Q16663 113 aa23.46■■□□□ 1.35
SPSB3-211ENST00000569380 SLC38A10Q9HBR0 1119 aa23.46■■□□□ 1.35
SPSB3-211ENST00000569380 KRT2P35908 639 aa23.45■■□□□ 1.34
SPSB3-211ENST00000569380 MAP2K2P36507 400 aa23.45■■□□□ 1.34
SPSB3-211ENST00000569380 REPS2Q8NFH8 660 aa23.45■■□□□ 1.34
SPSB3-211ENST00000569380 P2RX7Q99572 595 aaKnown RBP23.45■■□□□ 1.34
SPSB3-211ENST00000569380 FTOQ9C0B1 505 aaKnown RBP eCLIP23.45■■□□□ 1.34
SPSB3-211ENST00000569380 ASCC2Q9H1I8 757 aaPredicted RBP23.45■■□□□ 1.34
SPSB3-211ENST00000569380 OPLAHO14841 1288 aa23.45■■□□□ 1.34
SPSB3-211ENST00000569380 DNM1Q05193 864 aaKnown RBP23.45■■□□□ 1.34
SPSB3-211ENST00000569380 UBE2SQ16763 222 aa23.45■■□□□ 1.34
SPSB3-211ENST00000569380 FASTKD5Q7L8L6 764 aaKnown RBP23.45■■□□□ 1.34
SPSB3-211ENST00000569380 TNFRSF25Q93038 417 aa23.45■■□□□ 1.34
SPSB3-211ENST00000569380 ZMYND12Q9H0C1 365 aa23.45■■□□□ 1.34
SPSB3-211ENST00000569380 TMEM260Q9NX78 707 aa23.45■■□□□ 1.34
SPSB3-211ENST00000569380 PCDHA4Q9UN74 947 aa23.45■■□□□ 1.34
SPSB3-211ENST00000569380 BTBD19C9JJ37 291 aa23.44■■□□□ 1.34
SPSB3-211ENST00000569380 HOXA7P31268 230 aaPredicted RBP23.44■■□□□ 1.34
SPSB3-211ENST00000569380 GTF2A2P52657 109 aa23.44■■□□□ 1.34
SPSB3-211ENST00000569380 GNL2Q13823 731 aaKnown RBP23.44■■□□□ 1.34
SPSB3-211ENST00000569380 BLIDQ8IZY5 108 aa23.44■■□□□ 1.34
SPSB3-211ENST00000569380 CCDC148Q8NFR7 591 aa23.44■■□□□ 1.34
SPSB3-211ENST00000569380 PTPN18Q99952 460 aa23.44■■□□□ 1.34
SPSB3-211ENST00000569380 ADAMTS5Q9UNA0 930 aa23.44■■□□□ 1.34
SPSB3-211ENST00000569380 ZBTB48P10074 688 aaPredicted RBP23.43■■□□□ 1.34
SPSB3-211ENST00000569380 CETPP11597 493 aa23.43■■□□□ 1.34
SPSB3-211ENST00000569380 U2AF2P26368 475 aaKnown RBP eCLIP23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms