RNA–Protein interactions for RNA: ENST00000569263.1

CNOT1-217, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-217ENST00000569263 LZTS2Q9BRK4 669 aa15.18■□□□□ 0.02
CNOT1-217ENST00000569263 ARHGAP39Q9C0H5 1083 aa15.18■□□□□ 0.02
CNOT1-217ENST00000569263 PORCNQ9H237 461 aa15.18■□□□□ 0.02
CNOT1-217ENST00000569263 ALDH8A1Q9H2A2 487 aaPredicted RBP15.18■□□□□ 0.02
CNOT1-217ENST00000569263 VAT1LQ9HCJ6 419 aa15.18■□□□□ 0.02
CNOT1-217ENST00000569263 RBBP6Q7Z6E9 1792 aaKnown RBP15.18■□□□□ 0.02
CNOT1-217ENST00000569263 ATP2A1O14983 1001 aa15.17■□□□□ 0.02
CNOT1-217ENST00000569263 PLEKHA8P1O95397 391 aa15.17■□□□□ 0.02
CNOT1-217ENST00000569263 SLC25A27O95847 323 aa15.17■□□□□ 0.02
CNOT1-217ENST00000569263 AK2P54819 239 aa15.17■□□□□ 0.02
CNOT1-217ENST00000569263 NOL8Q76FK4 1167 aaKnown RBP15.17■□□□□ 0.02
CNOT1-217ENST00000569263 HOMER1Q86YM7 354 aa15.17■□□□□ 0.02
CNOT1-217ENST00000569263 SHCBP1Q8NEM2 672 aa15.17■□□□□ 0.02
CNOT1-217ENST00000569263 COA7Q96BR5 231 aa15.17■□□□□ 0.02
CNOT1-217ENST00000569263 TRIM47Q96LD4 638 aa15.17■□□□□ 0.02
CNOT1-217ENST00000569263 KIF2CQ99661 725 aa15.17■□□□□ 0.02
CNOT1-217ENST00000569263 JMJD4Q9H9V9 463 aa15.17■□□□□ 0.02
CNOT1-217ENST00000569263 EFCC1Q9HA90 598 aa15.17■□□□□ 0.02
CNOT1-217ENST00000569263 PNMA2Q9UL42 364 aa15.17■□□□□ 0.02
CNOT1-217ENST00000569263 CCPG1Q9ULG6 757 aa15.17■□□□□ 0.02
CNOT1-217ENST00000569263 TRIM17Q9Y577 477 aa15.17■□□□□ 0.02
CNOT1-217ENST00000569263 IVNS1ABPQ9Y6Y0 642 aa15.17■□□□□ 0.02
CNOT1-217ENST00000569263 NID2Q14112 1375 aa15.16■□□□□ 0.02
CNOT1-217ENST00000569263 CCDC196A0A1B0GTZ2 297 aa15.16■□□□□ 0.02
CNOT1-217ENST00000569263 GNRH1P01148 92 aa15.16■□□□□ 0.02
CNOT1-217ENST00000569263 ICAM1P05362 532 aa15.16■□□□□ 0.02
CNOT1-217ENST00000569263 ERCC3P19447 782 aa15.16■□□□□ 0.02
CNOT1-217ENST00000569263 HOXD10P28358 340 aa15.16■□□□□ 0.02
CNOT1-217ENST00000569263 PPP2R5BQ15173 497 aa15.16■□□□□ 0.02
CNOT1-217ENST00000569263 TMTC3Q6ZXV5 915 aa15.16■□□□□ 0.02
CNOT1-217ENST00000569263 PLEKHH3Q7Z736 793 aa15.16■□□□□ 0.02
CNOT1-217ENST00000569263 LARP6Q9BRS8 491 aaKnown RBP15.16■□□□□ 0.02
CNOT1-217ENST00000569263 SPZ1Q9BXG8 430 aa15.16■□□□□ 0.02
CNOT1-217ENST00000569263 MROH8Q9H579 483 aa15.16■□□□□ 0.02
CNOT1-217ENST00000569263 HOMER2Q9NSB8 354 aa15.16■□□□□ 0.02
CNOT1-217ENST00000569263 ZNF536O15090 1300 aa15.16■□□□□ 0.02
CNOT1-217ENST00000569263 BAZ2BQ9UIF8 2168 aaKnown RBP15.15■□□□□ 0.02
CNOT1-217ENST00000569263 ZNF236Q9UL36 1845 aa15.15■□□□□ 0.02
CNOT1-217ENST00000569263 ST18O60284 1047 aa15.15■□□□□ 0.02
CNOT1-217ENST00000569263 ALAS1P13196 640 aa15.15■□□□□ 0.02
CNOT1-217ENST00000569263 CTGFP29279 349 aa15.15■□□□□ 0.02
CNOT1-217ENST00000569263 PDIA3P30101 505 aaKnown RBP15.15■□□□□ 0.02
CNOT1-217ENST00000569263 EVCP57679 992 aa15.15■□□□□ 0.02
CNOT1-217ENST00000569263 STK3Q13188 491 aa15.15■□□□□ 0.02
CNOT1-217ENST00000569263 QRICH1Q2TAL8 776 aa15.15■□□□□ 0.02
CNOT1-217ENST00000569263 TKFCQ3LXA3 575 aa15.15■□□□□ 0.02
CNOT1-217ENST00000569263 USH1GQ495M9 461 aa15.15■□□□□ 0.02
CNOT1-217ENST00000569263 GPR142Q7Z601 462 aa15.15■□□□□ 0.02
CNOT1-217ENST00000569263 CTU1Q7Z7A3 348 aaKnown RBP15.15■□□□□ 0.02
CNOT1-217ENST00000569263 CCDC82Q8N4S0 544 aa15.15■□□□□ 0.02
CNOT1-217ENST00000569263 PIBF1Q8WXW3 757 aa15.15■□□□□ 0.02
CNOT1-217ENST00000569263 RRP36Q96EU6 259 aaKnown RBP15.15■□□□□ 0.02
CNOT1-217ENST00000569263 ZNF274Q96GC6 653 aaPredicted RBP15.15■□□□□ 0.02
CNOT1-217ENST00000569263 AGBL1Q96MI9 1066 aa15.15■□□□□ 0.02
CNOT1-217ENST00000569263 PIGSQ96S52 555 aa15.15■□□□□ 0.02
CNOT1-217ENST00000569263 RIOX1Q9H6W3 641 aa15.15■□□□□ 0.02
CNOT1-217ENST00000569263 SEC63Q9UGP8 760 aaKnown RBP15.15■□□□□ 0.02
CNOT1-217ENST00000569263 HPS5Q9UPZ3 1129 aa15.15■□□□□ 0.02
CNOT1-217ENST00000569263 DOCK3Q8IZD9 2030 aa15.14■□□□□ 0.01
CNOT1-217ENST00000569263 ZNFX1Q9P2E3 1918 aaKnown RBP15.14■□□□□ 0.01
CNOT1-217ENST00000569263 ZBTB5O15062 677 aa15.14■□□□□ 0.01
CNOT1-217ENST00000569263 CYTH3O43739 400 aa15.14■□□□□ 0.01
CNOT1-217ENST00000569263 SMARCA1P28370 1054 aa15.14■□□□□ 0.01
CNOT1-217ENST00000569263 CDC27P30260 824 aa15.14■□□□□ 0.01
CNOT1-217ENST00000569263 CCT2P78371 535 aaKnown RBP15.14■□□□□ 0.01
CNOT1-217ENST00000569263 OTOP1Q7RTM1 612 aa15.14■□□□□ 0.01
CNOT1-217ENST00000569263 NBPF11Q86T75 865 aa15.14■□□□□ 0.01
CNOT1-217ENST00000569263 FBXO11Q86XK2 927 aa15.14■□□□□ 0.01
CNOT1-217ENST00000569263 CMTR1Q8N1G2 835 aaKnown RBP15.14■□□□□ 0.01
CNOT1-217ENST00000569263 SRBD1Q8N5C6 995 aaKnown RBP15.14■□□□□ 0.01
CNOT1-217ENST00000569263 CHST13Q8NET6 341 aa15.14■□□□□ 0.01
CNOT1-217ENST00000569263 SOCS4Q8WXH5 440 aa15.14■□□□□ 0.01
CNOT1-217ENST00000569263 SLKQ9H2G2 1235 aaPredicted RBP15.14■□□□□ 0.01
CNOT1-217ENST00000569263 RNF146Q9NTX7 359 aa15.14■□□□□ 0.01
CNOT1-217ENST00000569263 FBXO40Q9UH90 709 aa15.14■□□□□ 0.01
CNOT1-217ENST00000569263 PLXNA1Q9UIW2 1896 aa15.14■□□□□ 0.01
CNOT1-217ENST00000569263 SMCHD1A6NHR9 2005 aa15.13■□□□□ 0.01
CNOT1-217ENST00000569263 CPLX1O14810 134 aa15.13■□□□□ 0.01
CNOT1-217ENST00000569263 FCER1AP12319 257 aa15.13■□□□□ 0.01
CNOT1-217ENST00000569263 TAL1P17542 331 aaPredicted RBP15.13■□□□□ 0.01
CNOT1-217ENST00000569263 ADD1P35611 737 aaKnown RBP15.13■□□□□ 0.01
CNOT1-217ENST00000569263 CAP1Q01518 475 aa15.13■□□□□ 0.01
CNOT1-217ENST00000569263 TRAF1Q13077 416 aa15.13■□□□□ 0.01
CNOT1-217ENST00000569263 KCTD2Q14681 263 aa15.13■□□□□ 0.01
CNOT1-217ENST00000569263 SLC35G1Q2M3R5 365 aa15.13■□□□□ 0.01
CNOT1-217ENST00000569263 IL27Q8NEV9 243 aa15.13■□□□□ 0.01
CNOT1-217ENST00000569263 TRERF1Q96PN7 1200 aa15.13■□□□□ 0.01
CNOT1-217ENST00000569263 MMP19Q99542 508 aa15.13■□□□□ 0.01
CNOT1-217ENST00000569263 NUDT12Q9BQG2 462 aa15.13■□□□□ 0.01
CNOT1-217ENST00000569263 AMNQ9BXJ7 453 aa15.13■□□□□ 0.01
CNOT1-217ENST00000569263 ACAD9Q9H845 621 aa15.13■□□□□ 0.01
CNOT1-217ENST00000569263 NCOA5Q9HCD5 579 aaKnown RBP15.13■□□□□ 0.01
CNOT1-217ENST00000569263 SRRDQ9UH36 339 aa15.13■□□□□ 0.01
CNOT1-217ENST00000569263 TPCN1Q9ULQ1 816 aa15.13■□□□□ 0.01
CNOT1-217ENST00000569263 RIPK3Q9Y572 518 aa15.13■□□□□ 0.01
CNOT1-217ENST00000569263 CNTNAP5Q8WYK1 1306 aa15.13■□□□□ 0.01
CNOT1-217ENST00000569263 PNMA6FA0A0J9YX94 578 aa15.12■□□□□ 0.01
CNOT1-217ENST00000569263 SLC15A5A6NIM6 579 aa15.12■□□□□ 0.01
CNOT1-217ENST00000569263 STRNO43815 780 aa15.12■□□□□ 0.01
CNOT1-217ENST00000569263 PTPREP23469 700 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms