RNA–Protein interactions for RNA: ENST00000569136.5

CAPN3-219, Transcript of calpain 3, humanhuman

TSL 2 BASIC

Gene CAPN3, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-219ENST00000569136 C17orf99Q6UX52 265 aa10.95□□□□□ -0.66
CAPN3-219ENST00000569136 TMEM179Q6ZVK1 233 aa10.95□□□□□ -0.66
CAPN3-219ENST00000569136 C16orf86Q6ZW13 317 aa10.95□□□□□ -0.66
CAPN3-219ENST00000569136 IFNL3Q8IZI9 196 aa10.95□□□□□ -0.66
CAPN3-219ENST00000569136 CDK15Q96Q40 435 aa10.95□□□□□ -0.66
CAPN3-219ENST00000569136 MCOLN1Q9GZU1 580 aa10.95□□□□□ -0.66
CAPN3-219ENST00000569136 EFCC1Q9HA90 598 aa10.95□□□□□ -0.66
CAPN3-219ENST00000569136 MAP4K5Q9Y4K4 846 aa10.95□□□□□ -0.66
CAPN3-219ENST00000569136 NRG2O14511 850 aaPredicted RBP10.94□□□□□ -0.66
CAPN3-219ENST00000569136 GDF11O95390 407 aa10.94□□□□□ -0.66
CAPN3-219ENST00000569136 GCLCP48506 637 aaPredicted RBP10.94□□□□□ -0.66
CAPN3-219ENST00000569136 TDO2P48775 406 aa10.94□□□□□ -0.66
CAPN3-219ENST00000569136 HMGCS2P54868 508 aa10.94□□□□□ -0.66
CAPN3-219ENST00000569136 PRMT2P55345 433 aa10.94□□□□□ -0.66
CAPN3-219ENST00000569136 ALX1Q15699 326 aa10.94□□□□□ -0.66
CAPN3-219ENST00000569136 PKDCCQ504Y2 493 aa10.94□□□□□ -0.66
CAPN3-219ENST00000569136 ZNF444Q8N0Y2 327 aaPredicted RBP10.94□□□□□ -0.66
CAPN3-219ENST00000569136 RILPL2Q969X0 211 aa10.94□□□□□ -0.66
CAPN3-219ENST00000569136 KIAA1683Q9H0B3 1180 aa10.94□□□□□ -0.66
CAPN3-219ENST00000569136 KANSL2Q9H9L4 492 aa10.94□□□□□ -0.66
CAPN3-219ENST00000569136 MKNK2Q9HBH9 465 aa10.94□□□□□ -0.66
CAPN3-219ENST00000569136 MINDY4BA8MYZ0 360 aa10.93□□□□□ -0.66
CAPN3-219ENST00000569136 M0R2C6 588 aa10.93□□□□□ -0.66
CAPN3-219ENST00000569136 MPHOSPH10O00566 681 aaKnown RBP10.93□□□□□ -0.66
CAPN3-219ENST00000569136 CYP2D6P10635 497 aa10.93□□□□□ -0.66
CAPN3-219ENST00000569136 SDSP20132 328 aa10.93□□□□□ -0.66
CAPN3-219ENST00000569136 JAG1P78504 1218 aa10.93□□□□□ -0.66
CAPN3-219ENST00000569136 PDE4BQ07343 736 aa10.93□□□□□ -0.66
CAPN3-219ENST00000569136 NNTQ13423 1086 aa10.93□□□□□ -0.66
CAPN3-219ENST00000569136 FBXO46Q6PJ61 603 aaPredicted RBP10.93□□□□□ -0.66
CAPN3-219ENST00000569136 SMCR8Q8TEV9 937 aaPredicted RBP10.93□□□□□ -0.66
CAPN3-219ENST00000569136 GTF3C2Q8WUA4 911 aaPredicted RBP10.93□□□□□ -0.66
CAPN3-219ENST00000569136 DYNLL2Q96FJ2 89 aa10.93□□□□□ -0.66
CAPN3-219ENST00000569136 ABHD8Q96I13 439 aa10.93□□□□□ -0.66
CAPN3-219ENST00000569136 CALR3Q96L12 384 aaKnown RBP10.93□□□□□ -0.66
CAPN3-219ENST00000569136 NAPBQ9H115 298 aa10.93□□□□□ -0.66
CAPN3-219ENST00000569136 SH2D4AQ9H788 454 aa10.93□□□□□ -0.66
CAPN3-219ENST00000569136 THSD7BQ9C0I4 1608 aa10.92□□□□□ -0.66
CAPN3-219ENST00000569136 USP17L15C9J2P7 530 aa10.92□□□□□ -0.66
CAPN3-219ENST00000569136 USP17L13C9JLJ4 530 aa10.92□□□□□ -0.66
CAPN3-219ENST00000569136 USP17L11C9JVI0 530 aa10.92□□□□□ -0.66
CAPN3-219ENST00000569136 USP17L18D6R9N7 530 aa10.92□□□□□ -0.66
CAPN3-219ENST00000569136 USP17L22D6RA61 530 aa10.92□□□□□ -0.66
CAPN3-219ENST00000569136 USP17L17D6RBQ6 530 aa10.92□□□□□ -0.66
CAPN3-219ENST00000569136 USP17L19D6RCP7 530 aa10.92□□□□□ -0.66
CAPN3-219ENST00000569136 USP17L20D6RJB6 530 aa10.92□□□□□ -0.66
CAPN3-219ENST00000569136 SMPD1P17405 629 aa10.92□□□□□ -0.66
CAPN3-219ENST00000569136 GRM5P41594 1212 aa10.92□□□□□ -0.66
CAPN3-219ENST00000569136 IRX3P78415 501 aaPredicted RBP10.92□□□□□ -0.66
CAPN3-219ENST00000569136 LACTBP83111 547 aaPredicted RBP10.92□□□□□ -0.66
CAPN3-219ENST00000569136 USP17L24Q0WX57 530 aa10.92□□□□□ -0.66
CAPN3-219ENST00000569136 NR5A1Q13285 461 aa10.92□□□□□ -0.66
CAPN3-219ENST00000569136 SEPT2Q15019 361 aa10.92□□□□□ -0.66
CAPN3-219ENST00000569136 CCDC84Q86UT8 332 aaPredicted RBP10.92□□□□□ -0.66
CAPN3-219ENST00000569136 GLMNQ92990 594 aa10.92□□□□□ -0.66
CAPN3-219ENST00000569136 C12orf42Q96LP6 360 aa10.92□□□□□ -0.66
CAPN3-219ENST00000569136 SEC62Q99442 399 aaKnown RBP10.92□□□□□ -0.66
CAPN3-219ENST00000569136 FEZ1Q99689 392 aa10.92□□□□□ -0.66
CAPN3-219ENST00000569136 ARHGEF10LQ9HCE6 1279 aa10.92□□□□□ -0.66
CAPN3-219ENST00000569136 HOXC10Q9NYD6 342 aa10.92□□□□□ -0.66
CAPN3-219ENST00000569136 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.92□□□□□ -0.66
CAPN3-219ENST00000569136 CPA4Q9UI42 421 aa10.92□□□□□ -0.66
CAPN3-219ENST00000569136 TRIM17Q9Y577 477 aa10.92□□□□□ -0.66
CAPN3-219ENST00000569136 ECM29Q5VYK3 1845 aa10.92□□□□□ -0.66
CAPN3-219ENST00000569136 CYP2D7A0A087X1C5 515 aa10.91□□□□□ -0.66
CAPN3-219ENST00000569136 NEFLP07196 543 aa10.91□□□□□ -0.66
CAPN3-219ENST00000569136 CYP2C8P10632 490 aa10.91□□□□□ -0.66
CAPN3-219ENST00000569136 BCRP11274 1271 aa10.91□□□□□ -0.66
CAPN3-219ENST00000569136 GUCY1A2P33402 732 aa10.91□□□□□ -0.66
CAPN3-219ENST00000569136 LAPTM4AQ15012 233 aa10.91□□□□□ -0.66
CAPN3-219ENST00000569136 TREML2Q5T2D2 321 aa10.91□□□□□ -0.66
CAPN3-219ENST00000569136 CENPQQ7L2Z9 268 aaPredicted RBP10.91□□□□□ -0.66
CAPN3-219ENST00000569136 OTOP1Q7RTM1 612 aa10.91□□□□□ -0.66
CAPN3-219ENST00000569136 CD99L2Q8TCZ2 262 aa10.91□□□□□ -0.66
CAPN3-219ENST00000569136 LPAR1Q92633 364 aa10.91□□□□□ -0.66
CAPN3-219ENST00000569136 ASCC2Q9H1I8 757 aaPredicted RBP10.91□□□□□ -0.66
CAPN3-219ENST00000569136 DIAPH3Q9NSV4 1193 aa10.91□□□□□ -0.66
CAPN3-219ENST00000569136 MYH13Q9UKX3 1938 aa10.91□□□□□ -0.66
CAPN3-219ENST00000569136 CENPBP07199 599 aaPredicted RBP10.9□□□□□ -0.66
CAPN3-219ENST00000569136 AKR1B1P15121 316 aa10.9□□□□□ -0.66
CAPN3-219ENST00000569136 PSMC4P43686 418 aa10.9□□□□□ -0.66
CAPN3-219ENST00000569136 NT5C2P49902 561 aa10.9□□□□□ -0.66
CAPN3-219ENST00000569136 FCGRTP55899 365 aa10.9□□□□□ -0.66
CAPN3-219ENST00000569136 PPARAQ07869 468 aa10.9□□□□□ -0.66
CAPN3-219ENST00000569136 FAM110CQ1W6H9 321 aa10.9□□□□□ -0.66
CAPN3-219ENST00000569136 INTS6LQ5JSJ4 861 aaKnown RBP10.9□□□□□ -0.66
CAPN3-219ENST00000569136 ERICH6BQ5W0A0 696 aa10.9□□□□□ -0.66
CAPN3-219ENST00000569136 NBPF11Q86T75 865 aa10.9□□□□□ -0.66
CAPN3-219ENST00000569136 SLC44A5Q8NCS7 719 aa10.9□□□□□ -0.66
CAPN3-219ENST00000569136 ACER1Q8TDN7 264 aa10.9□□□□□ -0.66
CAPN3-219ENST00000569136 RUFY2Q8WXA3 655 aa10.9□□□□□ -0.66
CAPN3-219ENST00000569136 FAM227BQ96M60 508 aa10.9□□□□□ -0.66
CAPN3-219ENST00000569136 P2RX7Q99572 595 aaKnown RBP10.9□□□□□ -0.66
CAPN3-219ENST00000569136 ANAPC4Q9UJX5 808 aa10.9□□□□□ -0.66
CAPN3-219ENST00000569136 PTPN22Q9Y2R2 807 aa10.9□□□□□ -0.66
CAPN3-219ENST00000569136 TMX2Q9Y320 296 aa10.9□□□□□ -0.66
CAPN3-219ENST00000569136 ADGRA2Q96PE1 1338 aa10.89□□□□□ -0.67
CAPN3-219ENST00000569136 CCDC85CA6NKD9 419 aa10.89□□□□□ -0.67
CAPN3-219ENST00000569136 FGAP02671 866 aa10.89□□□□□ -0.67
CAPN3-219ENST00000569136 HSPD1P10809 573 aaKnown RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms