RNA–Protein interactions for RNA: ENST00000569020.5

CNOT1-215, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-215ENST00000569020 ACLYP53396 1101 aa16.2■□□□□ 0.18
CNOT1-215ENST00000569020 C9orf50Q5SZB4 431 aa16.2■□□□□ 0.18
CNOT1-215ENST00000569020 ANKRD45Q5TZF3 282 aa16.2■□□□□ 0.18
CNOT1-215ENST00000569020 GMCL1Q96IK5 515 aa16.2■□□□□ 0.18
CNOT1-215ENST00000569020 ACAD9Q9H845 621 aa16.2■□□□□ 0.18
CNOT1-215ENST00000569020 SPC25Q9HBM1 224 aa16.2■□□□□ 0.18
CNOT1-215ENST00000569020 HOMER2Q9NSB8 354 aa16.2■□□□□ 0.18
CNOT1-215ENST00000569020 STX8Q9UNK0 236 aa16.2■□□□□ 0.18
CNOT1-215ENST00000569020 RAG1P15918 1043 aa16.19■□□□□ 0.18
CNOT1-215ENST00000569020 RRP1P56182 461 aaKnown RBP16.19■□□□□ 0.18
CNOT1-215ENST00000569020 CTDSPL2Q05D32 466 aa16.19■□□□□ 0.18
CNOT1-215ENST00000569020 KCNA10Q16322 511 aa16.19■□□□□ 0.18
CNOT1-215ENST00000569020 CCDC129Q6ZRS4 1044 aa16.19■□□□□ 0.18
CNOT1-215ENST00000569020 ARMCX2Q7L311 632 aa16.19■□□□□ 0.18
CNOT1-215ENST00000569020 PCSK9Q8NBP7 692 aaKnown RBP16.19■□□□□ 0.18
CNOT1-215ENST00000569020 KLHDC9Q8NEP7 349 aa16.19■□□□□ 0.18
CNOT1-215ENST00000569020 STAG1Q8WVM7 1258 aa16.19■□□□□ 0.18
CNOT1-215ENST00000569020 EVI5LQ96CN4 794 aa16.19■□□□□ 0.18
CNOT1-215ENST00000569020 GLT1D1Q96MS3 346 aa16.19■□□□□ 0.18
CNOT1-215ENST00000569020 FAM161BQ96MY7 647 aa16.19■□□□□ 0.18
CNOT1-215ENST00000569020 TOX2Q96NM4 488 aa16.19■□□□□ 0.18
CNOT1-215ENST00000569020 TMEM39AQ9NV64 488 aa16.19■□□□□ 0.18
CNOT1-215ENST00000569020 SALL3Q9BXA9 1300 aa16.19■□□□□ 0.18
CNOT1-215ENST00000569020 DCDC2CA8MYV0 355 aa16.18■□□□□ 0.18
CNOT1-215ENST00000569020 KIAA0355O15063 1070 aa16.18■□□□□ 0.18
CNOT1-215ENST00000569020 C6orf222P0C671 652 aaPredicted RBP16.18■□□□□ 0.18
CNOT1-215ENST00000569020 MCCP23508 829 aa16.18■□□□□ 0.18
CNOT1-215ENST00000569020 CST5P28325 142 aaPredicted RBP16.18■□□□□ 0.18
CNOT1-215ENST00000569020 TKFCQ3LXA3 575 aa16.18■□□□□ 0.18
CNOT1-215ENST00000569020 CCDC144BQ3MJ40 725 aa16.18■□□□□ 0.18
CNOT1-215ENST00000569020 ANKRD33Q7Z3H0 272 aa16.18■□□□□ 0.18
CNOT1-215ENST00000569020 CCDC144CPQ8IYA2 1237 aa16.18■□□□□ 0.18
CNOT1-215ENST00000569020 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.18■□□□□ 0.18
CNOT1-215ENST00000569020 MROH7Q68CQ1 1323 aa16.18■□□□□ 0.18
CNOT1-215ENST00000569020 RANBP6O60518 1105 aaKnown RBP16.17■□□□□ 0.18
CNOT1-215ENST00000569020 PLA2G6O60733 806 aa16.17■□□□□ 0.18
CNOT1-215ENST00000569020 ITGB8P26012 769 aa16.17■□□□□ 0.18
CNOT1-215ENST00000569020 SMAD3P84022 425 aaKnown RBP16.17■□□□□ 0.18
CNOT1-215ENST00000569020 FAAP100Q0VG06 881 aa16.17■□□□□ 0.18
CNOT1-215ENST00000569020 CCSAPQ6IQ19 270 aaPredicted RBP16.17■□□□□ 0.18
CNOT1-215ENST00000569020 RCSD1Q6JBY9 416 aa16.17■□□□□ 0.18
CNOT1-215ENST00000569020 CHMP4CQ96CF2 233 aa16.17■□□□□ 0.18
CNOT1-215ENST00000569020 FGD4Q96M96 766 aa16.17■□□□□ 0.18
CNOT1-215ENST00000569020 AGBL1Q96MI9 1066 aa16.17■□□□□ 0.18
CNOT1-215ENST00000569020 GUCD1Q96NT3 240 aa16.17■□□□□ 0.18
CNOT1-215ENST00000569020 IL17RBQ9NRM6 502 aa16.17■□□□□ 0.18
CNOT1-215ENST00000569020 HELLSQ9NRZ9 838 aa16.17■□□□□ 0.18
CNOT1-215ENST00000569020 RNF146Q9NTX7 359 aa16.17■□□□□ 0.18
CNOT1-215ENST00000569020 ZNF536O15090 1300 aa16.17■□□□□ 0.18
CNOT1-215ENST00000569020 ELP1O95163 1332 aa16.17■□□□□ 0.18
CNOT1-215ENST00000569020 MYADML2A6NDP7 307 aa16.16■□□□□ 0.18
CNOT1-215ENST00000569020 ASB14A6NK59 587 aa16.16■□□□□ 0.18
CNOT1-215ENST00000569020 FOXP2O15409 715 aa16.16■□□□□ 0.18
CNOT1-215ENST00000569020 ASGR1P07306 291 aa16.16■□□□□ 0.18
CNOT1-215ENST00000569020 ALAS1P13196 640 aa16.16■□□□□ 0.18
CNOT1-215ENST00000569020 GJA9P57773 515 aa16.16■□□□□ 0.18
CNOT1-215ENST00000569020 CNTN2Q02246 1040 aa16.16■□□□□ 0.18
CNOT1-215ENST00000569020 FPGSQ05932 587 aa16.16■□□□□ 0.18
CNOT1-215ENST00000569020 KCTD1Q719H9 257 aa16.16■□□□□ 0.18
CNOT1-215ENST00000569020 FAM133AQ8N9E0 248 aa16.16■□□□□ 0.18
CNOT1-215ENST00000569020 VTI1AQ96AJ9 217 aa16.16■□□□□ 0.18
CNOT1-215ENST00000569020 RNPC3Q96LT9 517 aaKnown RBP16.16■□□□□ 0.18
CNOT1-215ENST00000569020 TRERF1Q96PN7 1200 aa16.16■□□□□ 0.18
CNOT1-215ENST00000569020 A1CFQ9NQ94 594 aaKnown RBP16.16■□□□□ 0.18
CNOT1-215ENST00000569020 INCENPQ9NQS7 918 aa16.16■□□□□ 0.18
CNOT1-215ENST00000569020 TOMM22Q9NS69 142 aa16.16■□□□□ 0.18
CNOT1-215ENST00000569020 ANAPC4Q9UJX5 808 aa16.16■□□□□ 0.18
CNOT1-215ENST00000569020 LRRC37A2A6NM11 1700 aa16.16■□□□□ 0.18
CNOT1-215ENST00000569020 ADCY6O43306 1168 aa16.15■□□□□ 0.18
CNOT1-215ENST00000569020 NMT2O60551 498 aa16.15■□□□□ 0.18
CNOT1-215ENST00000569020 PDE1AP54750 535 aa16.15■□□□□ 0.18
CNOT1-215ENST00000569020 GNASQ5JWF2 1037 aa16.15■□□□□ 0.18
CNOT1-215ENST00000569020 VPS53Q5VIR6 699 aa16.15■□□□□ 0.18
CNOT1-215ENST00000569020 CCDC174Q6PII3 467 aa16.15■□□□□ 0.18
CNOT1-215ENST00000569020 CRBNQ96SW2 442 aa16.15■□□□□ 0.18
CNOT1-215ENST00000569020 UPF3AQ9H1J1 476 aaKnown RBP16.15■□□□□ 0.18
CNOT1-215ENST00000569020 PRR12Q9ULL5 1215 aa16.15■□□□□ 0.18
CNOT1-215ENST00000569020 MTMR7Q9Y216 660 aa16.15■□□□□ 0.18
CNOT1-215ENST00000569020 COL6A3P12111 3177 aa16.14■□□□□ 0.17
CNOT1-215ENST00000569020 LCTP09848 1927 aa16.14■□□□□ 0.17
CNOT1-215ENST00000569020 A0A0U1RQG5 324 aaPredicted RBP16.14■□□□□ 0.17
CNOT1-215ENST00000569020 ORC4O43929 436 aa16.14■□□□□ 0.17
CNOT1-215ENST00000569020 IRX5P78411 483 aaPredicted RBP16.14■□□□□ 0.17
CNOT1-215ENST00000569020 TNFAIP2Q03169 654 aa16.14■□□□□ 0.17
CNOT1-215ENST00000569020 HDAC1Q13547 482 aaPredicted RBP16.14■□□□□ 0.17
CNOT1-215ENST00000569020 ALX1Q15699 326 aa16.14■□□□□ 0.17
CNOT1-215ENST00000569020 CCDC96Q2M329 555 aa16.14■□□□□ 0.17
CNOT1-215ENST00000569020 MCMDC2Q4G0Z9 681 aa16.14■□□□□ 0.17
CNOT1-215ENST00000569020 NOL8Q76FK4 1167 aaKnown RBP16.14■□□□□ 0.17
CNOT1-215ENST00000569020 DCAF4Q8WV16 495 aa16.14■□□□□ 0.17
CNOT1-215ENST00000569020 KATNBL1Q9H079 304 aa16.14■□□□□ 0.17
CNOT1-215ENST00000569020 SOWAHBA6NEL2 793 aa16.13■□□□□ 0.17
CNOT1-215ENST00000569020 TLR3O15455 904 aaKnown RBP16.13■□□□□ 0.17
CNOT1-215ENST00000569020 TIMP1P01033 207 aa16.13■□□□□ 0.17
CNOT1-215ENST00000569020 FGRP09769 529 aa16.13■□□□□ 0.17
CNOT1-215ENST00000569020 SNAP25P60880 206 aa16.13■□□□□ 0.17
CNOT1-215ENST00000569020 RRP12Q5JTH9 1297 aaKnown RBP16.13■□□□□ 0.17
CNOT1-215ENST00000569020 TICAM2Q86XR7 235 aa16.13■□□□□ 0.17
CNOT1-215ENST00000569020 CDX2Q99626 313 aaPredicted RBP16.13■□□□□ 0.17
CNOT1-215ENST00000569020 SEMA6BQ9H3T3 888 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms