RNA–Protein interactions for RNA: ENST00000569001.1

BBS4-215, Transcript of Bardet-Biedl syndrome 4, human

TSL 3

Gene BBS4, Length 349 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS4-215	ENST00000569001	GNPTAB	Q3T906	1256 aa		5.12	□□□□□ -1.59
BBS4-215	ENST00000569001	TMEM132E	Q6IEE7	984 aa		5.12	□□□□□ -1.59
BBS4-215	ENST00000569001	SLCO6A1	Q86UG4	719 aa		5.12	□□□□□ -1.59
BBS4-215	ENST00000569001	NUP43	Q8NFH3	380 aa		5.12	□□□□□ -1.59
BBS4-215	ENST00000569001	RASGRP4	Q8TDF6	673 aa		5.12	□□□□□ -1.59
BBS4-215	ENST00000569001	SHD	Q96IW2	340 aa		5.12	□□□□□ -1.59
BBS4-215	ENST00000569001	HAUS7	Q99871	368 aa		5.12	□□□□□ -1.59
BBS4-215	ENST00000569001	MCMBP	Q9BTE3	642 aa		5.12	□□□□□ -1.59
BBS4-215	ENST00000569001	LGR4	Q9BXB1	951 aa		5.12	□□□□□ -1.59
BBS4-215	ENST00000569001	SRRT	Q9BXP5	876 aa	Known RBP	5.12	□□□□□ -1.59
BBS4-215	ENST00000569001	ZNF552	Q9H707	407 aa	Predicted RBP	5.12	□□□□□ -1.59
BBS4-215	ENST00000569001	IMPACT	Q9P2X3	320 aa		5.12	□□□□□ -1.59
BBS4-215	ENST00000569001	TAF6L	Q9Y6J9	622 aa		5.12	□□□□□ -1.59
BBS4-215	ENST00000569001	NUDT19	A8MXV4	375 aa		5.11	□□□□□ -1.59
BBS4-215	ENST00000569001	GSN	P06396	782 aa		5.11	□□□□□ -1.59
BBS4-215	ENST00000569001	EPHX1	P07099	455 aa		5.11	□□□□□ -1.59
BBS4-215	ENST00000569001	GJA8	P48165	433 aa		5.11	□□□□□ -1.59
BBS4-215	ENST00000569001	EPHB3	P54753	998 aa		5.11	□□□□□ -1.59
BBS4-215	ENST00000569001	DLG4	P78352	724 aa		5.11	□□□□□ -1.59
BBS4-215	ENST00000569001	SRSF3	P84103	164 aa	Known RBP	5.11	□□□□□ -1.59
BBS4-215	ENST00000569001	DPY19L1	Q2PZI1	675 aa		5.11	□□□□□ -1.59
BBS4-215	ENST00000569001	LCE4A	Q5TA78	99 aa		5.11	□□□□□ -1.59
BBS4-215	ENST00000569001	CWF19L1	Q69YN2	538 aa	Known RBP	5.11	□□□□□ -1.59
BBS4-215	ENST00000569001	NAT16	Q8N8M0	369 aa		5.11	□□□□□ -1.59
BBS4-215	ENST00000569001	BHLHE22	Q8NFJ8	381 aa	Predicted RBP	5.11	□□□□□ -1.59
BBS4-215	ENST00000569001	CPLX3	Q8WVH0	158 aa		5.11	□□□□□ -1.59
BBS4-215	ENST00000569001	KLHL6	Q8WZ60	621 aa		5.11	□□□□□ -1.59
BBS4-215	ENST00000569001	ANAPC16	Q96DE5	110 aa		5.11	□□□□□ -1.59
BBS4-215	ENST00000569001	FCRL3	Q96P31	734 aa	Predicted RBP	5.11	□□□□□ -1.59
BBS4-215	ENST00000569001	SLC26A8	Q96RN1	970 aa		5.11	□□□□□ -1.59
BBS4-215	ENST00000569001	IRF2BPL	Q9H1B7	796 aa		5.11	□□□□□ -1.59
BBS4-215	ENST00000569001	CCSER2	Q9H7U1	834 aa		5.11	□□□□□ -1.59
BBS4-215	ENST00000569001	GCM1	Q9NP62	436 aa		5.11	□□□□□ -1.59
BBS4-215	ENST00000569001	TNFRSF10D	Q9UBN6	386 aa		5.11	□□□□□ -1.59
BBS4-215	ENST00000569001	INPP5F	Q9Y2H2	1132 aa		5.11	□□□□□ -1.59
BBS4-215	ENST00000569001	FHOD1	Q9Y613	1164 aa		5.11	□□□□□ -1.59
BBS4-215	ENST00000569001	OR14I1	A6ND48	311 aa		5.1	□□□□□ -1.59
BBS4-215	ENST00000569001	VAMP4	O75379	141 aa		5.1	□□□□□ -1.59
BBS4-215	ENST00000569001	MED14OS	P0DP75	135 aa		5.1	□□□□□ -1.59
BBS4-215	ENST00000569001	GLDC	P23378	1020 aa		5.1	□□□□□ -1.59
BBS4-215	ENST00000569001	VIPR1	P32241	457 aa		5.1	□□□□□ -1.59
BBS4-215	ENST00000569001	LINC00310	P59036	64 aa		5.1	□□□□□ -1.59
BBS4-215	ENST00000569001	SSPN	Q14714	243 aa		5.1	□□□□□ -1.59
BBS4-215	ENST00000569001	SNX17	Q15036	470 aa		5.1	□□□□□ -1.59
BBS4-215	ENST00000569001	ADAT2	Q7Z6V5	191 aa	Known RBP	5.1	□□□□□ -1.59
BBS4-215	ENST00000569001	PANK1	Q8TE04	598 aa		5.1	□□□□□ -1.59
BBS4-215	ENST00000569001	TOX2	Q96NM4	488 aa		5.1	□□□□□ -1.59
BBS4-215	ENST00000569001	HCFC2	Q9Y5Z7	792 aa		5.1	□□□□□ -1.59
BBS4-215	ENST00000569001	MRVI1	Q9Y6F6	885 aa		5.1	□□□□□ -1.59
BBS4-215	ENST00000569001	STXBP3	O00186	592 aa		5.09	□□□□□ -1.59
BBS4-215	ENST00000569001	NUAK1	O60285	661 aa		5.09	□□□□□ -1.59
BBS4-215	ENST00000569001	ZSCAN22	P10073	491 aa	Predicted RBP	5.09	□□□□□ -1.59
BBS4-215	ENST00000569001	ITGA4	P13612	1032 aa		5.09	□□□□□ -1.59
BBS4-215	ENST00000569001	PNLIP	P16233	465 aa		5.09	□□□□□ -1.59
BBS4-215	ENST00000569001	TACR1	P25103	407 aa		5.09	□□□□□ -1.59
BBS4-215	ENST00000569001	NCKAP1L	P55160	1127 aa		5.09	□□□□□ -1.59
BBS4-215	ENST00000569001	SLC7A5	Q01650	507 aa		5.09	□□□□□ -1.59
BBS4-215	ENST00000569001	MVK	Q03426	396 aa		5.09	□□□□□ -1.59
BBS4-215	ENST00000569001	COL9A2	Q14055	689 aa	Predicted RBP	5.09	□□□□□ -1.59
BBS4-215	ENST00000569001	ANKRD39	Q53RE8	183 aa		5.09	□□□□□ -1.59
BBS4-215	ENST00000569001	HEATR6	Q6AI08	1181 aa	Known RBP	5.09	□□□□□ -1.59
BBS4-215	ENST00000569001	GALNT18	Q6P9A2	607 aa		5.09	□□□□□ -1.59
BBS4-215	ENST00000569001	SMARCC1	Q92922	1105 aa	Predicted RBP	5.09	□□□□□ -1.59
BBS4-215	ENST00000569001	TGIF2	Q9GZN2	237 aa		5.09	□□□□□ -1.59
BBS4-215	ENST00000569001	KLHL25	Q9H0H3	589 aa		5.09	□□□□□ -1.59
BBS4-215	ENST00000569001	CRTAC1	Q9NQ79	661 aa		5.09	□□□□□ -1.59
BBS4-215	ENST00000569001	MBD1	Q9UIS9	605 aa	Predicted RBP	5.09	□□□□□ -1.59
BBS4-215	ENST00000569001	PLA2G2D	Q9UNK4	145 aa		5.09	□□□□□ -1.59
BBS4-215	ENST00000569001	ARID1B	Q8NFD5	2236 aa	Predicted RBP	5.09	□□□□□ -1.59
BBS4-215	ENST00000569001	TEX51	A0A1B0GUA7	166 aa		5.08	□□□□□ -1.6
BBS4-215	ENST00000569001	WTIP	A6NIX2	430 aa	Predicted RBP	5.08	□□□□□ -1.6
BBS4-215	ENST00000569001	FGF10	O15520	208 aa	Predicted RBP	5.08	□□□□□ -1.6
BBS4-215	ENST00000569001	CYP4F8	P98187	520 aa		5.08	□□□□□ -1.6
BBS4-215	ENST00000569001	RAB3GAP1	Q15042	981 aa		5.08	□□□□□ -1.6
BBS4-215	ENST00000569001	TCEAL1	Q15170	157 aa		5.08	□□□□□ -1.6
BBS4-215	ENST00000569001	KIAA1211L	Q6NV74	962 aa		5.08	□□□□□ -1.6
BBS4-215	ENST00000569001	CNTD2	Q9H8S5	307 aa		5.08	□□□□□ -1.6
BBS4-215	ENST00000569001	RXFP1	Q9HBX9	757 aa		5.08	□□□□□ -1.6
BBS4-215	ENST00000569001	PRR13	Q9NZ81	148 aa		5.08	□□□□□ -1.6
BBS4-215	ENST00000569001	KLHL14	Q9P2G3	628 aa		5.08	□□□□□ -1.6
BBS4-215	ENST00000569001	APEX2	Q9UBZ4	518 aa		5.08	□□□□□ -1.6
BBS4-215	ENST00000569001	SUSD2	Q9UGT4	822 aa		5.08	□□□□□ -1.6
BBS4-215	ENST00000569001	PEX10	O60683	326 aa		5.07	□□□□□ -1.6
BBS4-215	ENST00000569001	PI3	P19957	117 aa		5.07	□□□□□ -1.6
BBS4-215	ENST00000569001	ERCC5	P28715	1186 aa	Predicted RBP	5.07	□□□□□ -1.6
BBS4-215	ENST00000569001	CDR1	P51861	262 aa		5.07	□□□□□ -1.6
BBS4-215	ENST00000569001	FBLN7	Q53RD9	439 aa		5.07	□□□□□ -1.6
BBS4-215	ENST00000569001	VHLL	Q6RSH7	139 aa		5.07	□□□□□ -1.6
BBS4-215	ENST00000569001	TMC6	Q7Z403	805 aa		5.07	□□□□□ -1.6
BBS4-215	ENST00000569001	JAML	Q86YT9	394 aa		5.07	□□□□□ -1.6
BBS4-215	ENST00000569001	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	5.07	□□□□□ -1.6
BBS4-215	ENST00000569001	PTCHD1	Q96NR3	888 aa		5.07	□□□□□ -1.6
BBS4-215	ENST00000569001	PHAX	Q9H814	394 aa	Known RBP	5.07	□□□□□ -1.6
BBS4-215	ENST00000569001	SIRT5	Q9NXA8	310 aa		5.07	□□□□□ -1.6
BBS4-215	ENST00000569001	FBLN5	Q9UBX5	448 aa		5.07	□□□□□ -1.6
BBS4-215	ENST00000569001	CGGBP1	Q9UFW8	167 aa	Predicted RBP	5.07	□□□□□ -1.6
BBS4-215	ENST00000569001	ACSL6	Q9UKU0	697 aa		5.07	□□□□□ -1.6
BBS4-215	ENST00000569001	SF3B6	Q9Y3B4	125 aa	Known RBP	5.07	□□□□□ -1.6
BBS4-215	ENST00000569001		A0A1W2PQ27	194 aa		5.06	□□□□□ -1.6
BBS4-215	ENST00000569001		A0A1W2PQ45	241 aa	Predicted RBP	5.06	□□□□□ -1.6

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