RNA–Protein interactions for RNA: ENST00000568890.5

CNEP1R1-210, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene CNEP1R1, Length 1,992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-210ENST00000568890 RIOX2Q8IUF8 465 aa19.38■□□□□ 0.69
CNEP1R1-210ENST00000568890 ERO1AQ96HE7 468 aa19.38■□□□□ 0.69
CNEP1R1-210ENST00000568890 BAZ2BQ9UIF8 2168 aaKnown RBP19.38■□□□□ 0.69
CNEP1R1-210ENST00000568890 DTNBO60941 627 aa19.37■□□□□ 0.69
CNEP1R1-210ENST00000568890 FMNL1O95466 1100 aaPredicted RBP19.37■□□□□ 0.69
CNEP1R1-210ENST00000568890 GPR142Q7Z601 462 aa19.37■□□□□ 0.69
CNEP1R1-210ENST00000568890 CTCFLQ8NI51 663 aaPredicted RBP19.37■□□□□ 0.69
CNEP1R1-210ENST00000568890 TEX13BQ9BXU2 312 aa19.37■□□□□ 0.69
CNEP1R1-210ENST00000568890 NCOA5Q9HCD5 579 aaKnown RBP19.37■□□□□ 0.69
CNEP1R1-210ENST00000568890 NAP1L2Q9ULW6 460 aaPredicted RBP19.37■□□□□ 0.69
CNEP1R1-210ENST00000568890 CALM1P0DP23 149 aa19.37■□□□□ 0.69
CNEP1R1-210ENST00000568890 CALM2P0DP24 149 aa19.37■□□□□ 0.69
CNEP1R1-210ENST00000568890 CALM3P0DP25 149 aa19.37■□□□□ 0.69
CNEP1R1-210ENST00000568890 PIBF1Q8WXW3 757 aa19.37■□□□□ 0.69
CNEP1R1-210ENST00000568890 UPF2Q9HAU5 1272 aaKnown RBP19.37■□□□□ 0.69
CNEP1R1-210ENST00000568890 SMCHD1A6NHR9 2005 aa19.36■□□□□ 0.69
CNEP1R1-210ENST00000568890 A0A0G2JMZ2 1700 aa19.36■□□□□ 0.69
CNEP1R1-210ENST00000568890 hCG_1642624A0A1W2PR95 340 aa19.36■□□□□ 0.69
CNEP1R1-210ENST00000568890 GOLGA8BA8MQT2 603 aa19.36■□□□□ 0.69
CNEP1R1-210ENST00000568890 PPFIA3O75145 1194 aa19.36■□□□□ 0.69
CNEP1R1-210ENST00000568890 FDX1P10109 184 aa19.36■□□□□ 0.69
CNEP1R1-210ENST00000568890 CCT2P78371 535 aaKnown RBP19.36■□□□□ 0.69
CNEP1R1-210ENST00000568890 QRICH1Q2TAL8 776 aa19.36■□□□□ 0.69
CNEP1R1-210ENST00000568890 SYNE3Q6ZMZ3 975 aa19.36■□□□□ 0.69
CNEP1R1-210ENST00000568890 NCAPG2Q86XI2 1143 aa19.36■□□□□ 0.69
CNEP1R1-210ENST00000568890 PIGSQ96S52 555 aa19.36■□□□□ 0.69
CNEP1R1-210ENST00000568890 TRIM17Q9Y577 477 aa19.36■□□□□ 0.69
CNEP1R1-210ENST00000568890 DOCK3Q8IZD9 2030 aa19.36■□□□□ 0.69
CNEP1R1-210ENST00000568890 LARGE1O95461 756 aa19.35■□□□□ 0.69
CNEP1R1-210ENST00000568890 ICAM1P05362 532 aa19.35■□□□□ 0.69
CNEP1R1-210ENST00000568890 FCGRTP55899 365 aa19.35■□□□□ 0.69
CNEP1R1-210ENST00000568890 CDC37Q16543 378 aaPredicted RBP19.35■□□□□ 0.69
CNEP1R1-210ENST00000568890 TMTC3Q6ZXV5 915 aa19.35■□□□□ 0.69
CNEP1R1-210ENST00000568890 NOL8Q76FK4 1167 aaKnown RBP19.35■□□□□ 0.69
CNEP1R1-210ENST00000568890 ZNF274Q96GC6 653 aaPredicted RBP19.35■□□□□ 0.69
CNEP1R1-210ENST00000568890 HOMER2Q9NSB8 354 aa19.35■□□□□ 0.69
CNEP1R1-210ENST00000568890 COL11A1P12107 1806 aaPredicted RBP19.35■□□□□ 0.69
CNEP1R1-210ENST00000568890 TNPO2O14787 897 aaKnown RBP19.35■□□□□ 0.69
CNEP1R1-210ENST00000568890 CD2BP2O95400 341 aaKnown RBP19.35■□□□□ 0.69
CNEP1R1-210ENST00000568890 MAPK4P31152 587 aa19.35■□□□□ 0.69
CNEP1R1-210ENST00000568890 KIF5BP33176 963 aa19.35■□□□□ 0.69
CNEP1R1-210ENST00000568890 OAZ1P54368 228 aa19.35■□□□□ 0.69
CNEP1R1-210ENST00000568890 CCNA1P78396 465 aa19.35■□□□□ 0.69
CNEP1R1-210ENST00000568890 PRKCZQ05513 592 aa19.35■□□□□ 0.69
CNEP1R1-210ENST00000568890 STK3Q13188 491 aa19.35■□□□□ 0.69
CNEP1R1-210ENST00000568890 NTRK3Q16288 839 aa19.35■□□□□ 0.69
CNEP1R1-210ENST00000568890 MUM1L1Q5H9M0 696 aa19.35■□□□□ 0.69
CNEP1R1-210ENST00000568890 WDR78Q5VTH9 848 aa19.35■□□□□ 0.69
CNEP1R1-210ENST00000568890 GOLGA8AA7E2F4 631 aa19.34■□□□□ 0.69
CNEP1R1-210ENST00000568890 DHX16O60231 1041 aaKnown RBP19.34■□□□□ 0.69
CNEP1R1-210ENST00000568890 METAP2P50579 478 aaKnown RBP eCLIP19.34■□□□□ 0.69
CNEP1R1-210ENST00000568890 KIF22Q14807 665 aa19.34■□□□□ 0.69
CNEP1R1-210ENST00000568890 RTN1Q16799 776 aa19.34■□□□□ 0.69
CNEP1R1-210ENST00000568890 MORN1Q5T089 497 aa19.34■□□□□ 0.69
CNEP1R1-210ENST00000568890 HOMER1Q86YM7 354 aa19.34■□□□□ 0.69
CNEP1R1-210ENST00000568890 SHCBP1Q8NEM2 672 aa19.34■□□□□ 0.69
CNEP1R1-210ENST00000568890 USP6NLQ92738 828 aa19.34■□□□□ 0.69
CNEP1R1-210ENST00000568890 SPZ1Q9BXG8 430 aa19.34■□□□□ 0.69
CNEP1R1-210ENST00000568890 SRRDQ9UH36 339 aa19.34■□□□□ 0.69
CNEP1R1-210ENST00000568890 ALAS1P13196 640 aa19.33■□□□□ 0.69
CNEP1R1-210ENST00000568890 PTPREP23469 700 aa19.33■□□□□ 0.69
CNEP1R1-210ENST00000568890 FLT3LGP49771 235 aa19.33■□□□□ 0.69
CNEP1R1-210ENST00000568890 RCAN1P53805 252 aa19.33■□□□□ 0.69
CNEP1R1-210ENST00000568890 ME3Q16798 604 aa19.33■□□□□ 0.69
CNEP1R1-210ENST00000568890 PLEKHH3Q7Z736 793 aa19.33■□□□□ 0.69
CNEP1R1-210ENST00000568890 MROH8Q9H579 483 aa19.33■□□□□ 0.69
CNEP1R1-210ENST00000568890 CCPG1Q9ULG6 757 aa19.33■□□□□ 0.69
CNEP1R1-210ENST00000568890 CTDP1Q9Y5B0 961 aaPredicted RBP19.33■□□□□ 0.69
CNEP1R1-210ENST00000568890 ZBTB5O15062 677 aa19.33■□□□□ 0.68
CNEP1R1-210ENST00000568890 SLC25A27O95847 323 aa19.33■□□□□ 0.68
CNEP1R1-210ENST00000568890 SMARCA1P28370 1054 aa19.33■□□□□ 0.68
CNEP1R1-210ENST00000568890 USH1GQ495M9 461 aa19.33■□□□□ 0.68
CNEP1R1-210ENST00000568890 CTU1Q7Z7A3 348 aaKnown RBP19.33■□□□□ 0.68
CNEP1R1-210ENST00000568890 CLEC4DQ8WXI8 215 aa19.33■□□□□ 0.68
CNEP1R1-210ENST00000568890 TBC1D5Q92609 795 aa19.33■□□□□ 0.68
CNEP1R1-210ENST00000568890 TRERF1Q96PN7 1200 aa19.33■□□□□ 0.68
CNEP1R1-210ENST00000568890 COBLO75128 1261 aa19.32■□□□□ 0.68
CNEP1R1-210ENST00000568890 SCRN1Q12765 414 aa19.32■□□□□ 0.68
CNEP1R1-210ENST00000568890 CCAR1Q8IX12 1150 aaKnown RBP19.32■□□□□ 0.68
CNEP1R1-210ENST00000568890 NID2Q14112 1375 aa19.32■□□□□ 0.68
CNEP1R1-210ENST00000568890 NFIBO00712 420 aa19.32■□□□□ 0.68
CNEP1R1-210ENST00000568890 OPLAHO14841 1288 aa19.32■□□□□ 0.68
CNEP1R1-210ENST00000568890 GNAQP50148 359 aa19.32■□□□□ 0.68
CNEP1R1-210ENST00000568890 NECAB1Q8N987 351 aa19.32■□□□□ 0.68
CNEP1R1-210ENST00000568890 COA7Q96BR5 231 aa19.32■□□□□ 0.68
CNEP1R1-210ENST00000568890 LZTS2Q9BRK4 669 aa19.32■□□□□ 0.68
CNEP1R1-210ENST00000568890 RBM28Q9NW13 759 aaKnown RBP19.32■□□□□ 0.68
CNEP1R1-210ENST00000568890 PTPN22Q9Y2R2 807 aa19.32■□□□□ 0.68
CNEP1R1-210ENST00000568890 V9GY48 417 aaPredicted RBP19.32■□□□□ 0.68
CNEP1R1-210ENST00000568890 PGK2P07205 417 aa19.31■□□□□ 0.68
CNEP1R1-210ENST00000568890 ST3GAL1Q11201 340 aa19.31■□□□□ 0.68
CNEP1R1-210ENST00000568890 GRB14Q14449 540 aa19.31■□□□□ 0.68
CNEP1R1-210ENST00000568890 RNF146Q9NTX7 359 aa19.31■□□□□ 0.68
CNEP1R1-210ENST00000568890 PTCH2Q9Y6C5 1203 aa19.31■□□□□ 0.68
CNEP1R1-210ENST00000568890 PNMA6FA0A0J9YX94 578 aa19.3■□□□□ 0.68
CNEP1R1-210ENST00000568890 ADORA2AP29274 412 aa19.3■□□□□ 0.68
CNEP1R1-210ENST00000568890 RABEP1Q15276 862 aa19.3■□□□□ 0.68
CNEP1R1-210ENST00000568890 PHKBQ93100 1093 aa19.3■□□□□ 0.68
CNEP1R1-210ENST00000568890 PURBQ96QR8 312 aaKnown RBP19.3■□□□□ 0.68
CNEP1R1-210ENST00000568890 CNTNAP5Q8WYK1 1306 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms