RNA–Protein interactions for RNA: ENST00000568743.1

PKM-221, Transcript of pyruvate kinase M1/2, humanhuman

TSL 1 (best)

Gene PKM, Length 580 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-221ENST00000568743 RANBP17Q9H2T7 1088 aaKnown RBP11.77□□□□□ -0.53
PKM-221ENST00000568743 NCOA5Q9HCD5 579 aaKnown RBP11.77□□□□□ -0.53
PKM-221ENST00000568743 FAM217BQ9NTX9 383 aaPredicted RBP11.77□□□□□ -0.53
PKM-221ENST00000568743 ZNF214Q9UL59 606 aaPredicted RBP11.77□□□□□ -0.53
PKM-221ENST00000568743 RIPK3Q9Y572 518 aa11.77□□□□□ -0.53
PKM-221ENST00000568743 ZNF536O15090 1300 aa11.77□□□□□ -0.53
PKM-221ENST00000568743 A0A0G2JMZ2 1700 aa11.77□□□□□ -0.53
PKM-221ENST00000568743 PARP14Q460N5 1801 aa11.76□□□□□ -0.53
PKM-221ENST00000568743 hCG_1642624A0A1W2PR95 340 aa11.76□□□□□ -0.53
PKM-221ENST00000568743 CYTH3O43739 400 aa11.76□□□□□ -0.53
PKM-221ENST00000568743 LARGE1O95461 756 aa11.76□□□□□ -0.53
PKM-221ENST00000568743 FMNL1O95466 1100 aaPredicted RBP11.76□□□□□ -0.53
PKM-221ENST00000568743 ERCC3P19447 782 aa11.76□□□□□ -0.53
PKM-221ENST00000568743 ADD1P35611 737 aaKnown RBP11.76□□□□□ -0.53
PKM-221ENST00000568743 EVCP57679 992 aa11.76□□□□□ -0.53
PKM-221ENST00000568743 CCNA1P78396 465 aa11.76□□□□□ -0.53
PKM-221ENST00000568743 KIF22Q14807 665 aa11.76□□□□□ -0.53
PKM-221ENST00000568743 RABEP1Q15276 862 aa11.76□□□□□ -0.53
PKM-221ENST00000568743 NCAPG2Q86XI2 1143 aa11.76□□□□□ -0.53
PKM-221ENST00000568743 CCAR1Q8IX12 1150 aaKnown RBP11.76□□□□□ -0.53
PKM-221ENST00000568743 ERO1AQ96HE7 468 aa11.76□□□□□ -0.53
PKM-221ENST00000568743 PIGSQ96S52 555 aa11.76□□□□□ -0.53
PKM-221ENST00000568743 ALDH8A1Q9H2A2 487 aaPredicted RBP11.76□□□□□ -0.53
PKM-221ENST00000568743 HOMER2Q9NSB8 354 aa11.76□□□□□ -0.53
PKM-221ENST00000568743 CCPG1Q9ULG6 757 aa11.76□□□□□ -0.53
PKM-221ENST00000568743 ZSWIM8A7E2V4 1837 aa11.75□□□□□ -0.53
PKM-221ENST00000568743 TNPO2O14787 897 aaKnown RBP11.75□□□□□ -0.53
PKM-221ENST00000568743 DTNBO60941 627 aa11.75□□□□□ -0.53
PKM-221ENST00000568743 ICAM1P05362 532 aa11.75□□□□□ -0.53
PKM-221ENST00000568743 FDX1P10109 184 aa11.75□□□□□ -0.53
PKM-221ENST00000568743 ALAS1P13196 640 aa11.75□□□□□ -0.53
PKM-221ENST00000568743 GNAQP50148 359 aa11.75□□□□□ -0.53
PKM-221ENST00000568743 FCGRTP55899 365 aa11.75□□□□□ -0.53
PKM-221ENST00000568743 ANKRD1Q15327 319 aa11.75□□□□□ -0.53
PKM-221ENST00000568743 QRICH1Q2TAL8 776 aa11.75□□□□□ -0.53
PKM-221ENST00000568743 USH1GQ495M9 461 aa11.75□□□□□ -0.53
PKM-221ENST00000568743 RIOX2Q8IUF8 465 aa11.75□□□□□ -0.53
PKM-221ENST00000568743 ZNF274Q96GC6 653 aaPredicted RBP11.75□□□□□ -0.53
PKM-221ENST00000568743 TEX13BQ9BXU2 312 aa11.75□□□□□ -0.53
PKM-221ENST00000568743 RIOX1Q9H6W3 641 aa11.75□□□□□ -0.53
PKM-221ENST00000568743 CWC22Q9HCG8 908 aaKnown RBP11.75□□□□□ -0.53
PKM-221ENST00000568743 RBM28Q9NW13 759 aaKnown RBP11.75□□□□□ -0.53
PKM-221ENST00000568743 ATP2A1O14983 1001 aa11.74□□□□□ -0.53
PKM-221ENST00000568743 PPP1R11O60927 126 aaPredicted RBP11.74□□□□□ -0.53
PKM-221ENST00000568743 CD2BP2O95400 341 aaKnown RBP11.74□□□□□ -0.53
PKM-221ENST00000568743 MAPK4P31152 587 aa11.74□□□□□ -0.53
PKM-221ENST00000568743 RCAN1P53805 252 aa11.74□□□□□ -0.53
PKM-221ENST00000568743 OAZ1P54368 228 aa11.74□□□□□ -0.53
PKM-221ENST00000568743 ME3Q16798 604 aa11.74□□□□□ -0.53
PKM-221ENST00000568743 MUM1L1Q5H9M0 696 aa11.74□□□□□ -0.53
PKM-221ENST00000568743 PPP4R3CPQ6ZMV5 832 aa11.74□□□□□ -0.53
PKM-221ENST00000568743 GPR142Q7Z601 462 aa11.74□□□□□ -0.53
PKM-221ENST00000568743 PLEKHH3Q7Z736 793 aa11.74□□□□□ -0.53
PKM-221ENST00000568743 NECAB1Q8N987 351 aa11.74□□□□□ -0.53
PKM-221ENST00000568743 MTMR8Q96EF0 704 aa11.74□□□□□ -0.53
PKM-221ENST00000568743 LZTS2Q9BRK4 669 aa11.74□□□□□ -0.53
PKM-221ENST00000568743 SPZ1Q9BXG8 430 aa11.74□□□□□ -0.53
PKM-221ENST00000568743 SLKQ9H2G2 1235 aaPredicted RBP11.74□□□□□ -0.53
PKM-221ENST00000568743 TRIM17Q9Y577 477 aa11.74□□□□□ -0.53
PKM-221ENST00000568743 CNTNAP5Q8WYK1 1306 aa11.74□□□□□ -0.53
PKM-221ENST00000568743 NID2Q14112 1375 aa11.74□□□□□ -0.53
PKM-221ENST00000568743 COL11A1P12107 1806 aaPredicted RBP11.74□□□□□ -0.53
PKM-221ENST00000568743 ZBTB5O15062 677 aa11.73□□□□□ -0.53
PKM-221ENST00000568743 PFKFB2O60825 505 aa11.73□□□□□ -0.53
PKM-221ENST00000568743 SLC25A27O95847 323 aa11.73□□□□□ -0.53
PKM-221ENST00000568743 PRKCZQ05513 592 aa11.73□□□□□ -0.53
PKM-221ENST00000568743 FUT2Q10981 343 aa11.73□□□□□ -0.53
PKM-221ENST00000568743 SCRN1Q12765 414 aa11.73□□□□□ -0.53
PKM-221ENST00000568743 OTOP1Q7RTM1 612 aa11.73□□□□□ -0.53
PKM-221ENST00000568743 FBXO11Q86XK2 927 aa11.73□□□□□ -0.53
PKM-221ENST00000568743 SHCBP1Q8NEM2 672 aa11.73□□□□□ -0.53
PKM-221ENST00000568743 PHKBQ93100 1093 aa11.73□□□□□ -0.53
PKM-221ENST00000568743 RRP36Q96EU6 259 aaKnown RBP11.73□□□□□ -0.53
PKM-221ENST00000568743 TRERF1Q96PN7 1200 aa11.73□□□□□ -0.53
PKM-221ENST00000568743 RNF146Q9NTX7 359 aa11.73□□□□□ -0.53
PKM-221ENST00000568743 GABRQQ9UN88 632 aa11.73□□□□□ -0.53
PKM-221ENST00000568743 IVNS1ABPQ9Y6Y0 642 aa11.73□□□□□ -0.53
PKM-221ENST00000568743 PNMA6FA0A0J9YX94 578 aa11.72□□□□□ -0.53
PKM-221ENST00000568743 CCDC196A0A1B0GTZ2 297 aa11.72□□□□□ -0.53
PKM-221ENST00000568743 NFIBO00712 420 aa11.72□□□□□ -0.53
PKM-221ENST00000568743 ST18O60284 1047 aa11.72□□□□□ -0.53
PKM-221ENST00000568743 NTRK3Q16288 839 aa11.72□□□□□ -0.53
PKM-221ENST00000568743 COA7Q96BR5 231 aa11.72□□□□□ -0.53
PKM-221ENST00000568743 MMP19Q99542 508 aa11.72□□□□□ -0.53
PKM-221ENST00000568743 SLC26A6Q9BXS9 759 aa11.72□□□□□ -0.53
PKM-221ENST00000568743 MROH8Q9H579 483 aa11.72□□□□□ -0.53
PKM-221ENST00000568743 PRDM10Q9NQV6 1147 aa11.72□□□□□ -0.53
PKM-221ENST00000568743 SEC63Q9UGP8 760 aaKnown RBP11.72□□□□□ -0.53
PKM-221ENST00000568743 LIMCH1Q9UPQ0 1083 aa11.72□□□□□ -0.53
PKM-221ENST00000568743 V9GY48 417 aaPredicted RBP11.72□□□□□ -0.53
PKM-221ENST00000568743 CASP8AP2Q9UKL3 1982 aa11.72□□□□□ -0.53
PKM-221ENST00000568743 CPLX1O14810 134 aa11.71□□□□□ -0.53
PKM-221ENST00000568743 PGK2P07205 417 aa11.71□□□□□ -0.53
PKM-221ENST00000568743 CYP2B6P20813 491 aa11.71□□□□□ -0.53
PKM-221ENST00000568743 PTPREP23469 700 aa11.71□□□□□ -0.53
PKM-221ENST00000568743 SMARCA1P28370 1054 aa11.71□□□□□ -0.53
PKM-221ENST00000568743 ADORA2AP29274 412 aa11.71□□□□□ -0.53
PKM-221ENST00000568743 COPB2P35606 906 aa11.71□□□□□ -0.53
PKM-221ENST00000568743 ST3GAL1Q11201 340 aa11.71□□□□□ -0.53
PKM-221ENST00000568743 ARHGEF6Q15052 776 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms