RNA–Protein interactions for RNA: ENST00000568559.1

TMEM170A-205, Transcript of transmembrane protein 170A, humanhuman

TSL 1 (best)

Gene TMEM170A, Length 4,345 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM170A-205ENST00000568559 CMA1P23946 247 aa13.71□□□□□ -0.21
TMEM170A-205ENST00000568559 NDUFA8P51970 172 aa13.71□□□□□ -0.21
TMEM170A-205ENST00000568559 FBXL16Q8N461 479 aa13.71□□□□□ -0.21
TMEM170A-205ENST00000568559 ZNF713Q8N859 430 aaPredicted RBP13.71□□□□□ -0.21
TMEM170A-205ENST00000568559 FAM200AQ8TCP9 573 aa13.71□□□□□ -0.21
TMEM170A-205ENST00000568559 CHMP2AO43633 222 aa13.71□□□□□ -0.21
TMEM170A-205ENST00000568559 IPO7O95373 1038 aaKnown RBP13.71□□□□□ -0.21
TMEM170A-205ENST00000568559 ASIC1P78348 528 aa13.71□□□□□ -0.21
TMEM170A-205ENST00000568559 SPDYE2Q495Y8 402 aa13.71□□□□□ -0.21
TMEM170A-205ENST00000568559 STAMQ92783 540 aa13.71□□□□□ -0.21
TMEM170A-205ENST00000568559 FAM198AQ9UFP1 575 aa13.71□□□□□ -0.21
TMEM170A-205ENST00000568559 SHMT1P34896 483 aa13.71□□□□□ -0.22
TMEM170A-205ENST00000568559 PRR16Q569H4 304 aa13.71□□□□□ -0.22
TMEM170A-205ENST00000568559 EHD4Q9H223 541 aa13.71□□□□□ -0.22
TMEM170A-205ENST00000568559 SH3GLB2Q9NR46 395 aa13.71□□□□□ -0.22
TMEM170A-205ENST00000568559 NUP188Q5SRE5 1749 aa13.71□□□□□ -0.22
TMEM170A-205ENST00000568559 CAVIN2O95810 425 aa13.71□□□□□ -0.22
TMEM170A-205ENST00000568559 TECP42680 631 aa13.71□□□□□ -0.22
TMEM170A-205ENST00000568559 TRAPPC10P48553 1259 aa13.71□□□□□ -0.22
TMEM170A-205ENST00000568559 ARMC9Q7Z3E5 817 aa13.71□□□□□ -0.22
TMEM170A-205ENST00000568559 BARHL2Q9NY43 387 aa13.71□□□□□ -0.22
TMEM170A-205ENST00000568559 COL1A1P02452 1464 aaPredicted RBP13.7□□□□□ -0.22
TMEM170A-205ENST00000568559 QRICH1Q2TAL8 776 aa13.7□□□□□ -0.22
TMEM170A-205ENST00000568559 FAM160B2Q86V87 743 aa13.7□□□□□ -0.22
TMEM170A-205ENST00000568559 SPZ1Q9BXG8 430 aa13.7□□□□□ -0.22
TMEM170A-205ENST00000568559 XRCC6P12956 609 aaKnown RBP eCLIP13.7□□□□□ -0.22
TMEM170A-205ENST00000568559 SMCR8Q8TEV9 937 aaPredicted RBP13.7□□□□□ -0.22
TMEM170A-205ENST00000568559 EXOC1Q9NV70 894 aa13.7□□□□□ -0.22
TMEM170A-205ENST00000568559 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.7□□□□□ -0.22
TMEM170A-205ENST00000568559 OR52Z1P0C646 297 aa13.7□□□□□ -0.22
TMEM170A-205ENST00000568559 CCT6AP40227 531 aaKnown RBP13.7□□□□□ -0.22
TMEM170A-205ENST00000568559 UBXN2AP68543 259 aa13.7□□□□□ -0.22
TMEM170A-205ENST00000568559 ZNF830Q96NB3 372 aaPredicted RBP13.7□□□□□ -0.22
TMEM170A-205ENST00000568559 MPHOSPH6Q99547 160 aaKnown RBP13.7□□□□□ -0.22
TMEM170A-205ENST00000568559 CSRNP2Q9H175 543 aa13.7□□□□□ -0.22
TMEM170A-205ENST00000568559 SERTAD1Q9UHV2 236 aa13.7□□□□□ -0.22
TMEM170A-205ENST00000568559 IQCA1LA6NCM1 817 aa13.69□□□□□ -0.22
TMEM170A-205ENST00000568559 PPP6R2O75170 966 aa13.69□□□□□ -0.22
TMEM170A-205ENST00000568559 SNX29Q8TEQ0 813 aa13.69□□□□□ -0.22
TMEM170A-205ENST00000568559 HOXA13P31271 388 aaPredicted RBP13.69□□□□□ -0.22
TMEM170A-205ENST00000568559 NCAPH2Q6IBW4 605 aa13.69□□□□□ -0.22
TMEM170A-205ENST00000568559 AOPEPQ8N6M6 819 aa13.69□□□□□ -0.22
TMEM170A-205ENST00000568559 SYT17Q9BSW7 474 aa13.69□□□□□ -0.22
TMEM170A-205ENST00000568559 LRRC27Q9C0I9 530 aa13.69□□□□□ -0.22
TMEM170A-205ENST00000568559 RMND1Q9NWS8 449 aa13.69□□□□□ -0.22
TMEM170A-205ENST00000568559 DDX25Q9UHL0 483 aaKnown RBP13.69□□□□□ -0.22
TMEM170A-205ENST00000568559 MAD2L2Q9UI95 211 aa13.69□□□□□ -0.22
TMEM170A-205ENST00000568559 CNTNAP5Q8WYK1 1306 aa13.69□□□□□ -0.22
TMEM170A-205ENST00000568559 MATR3P43243 847 aaKnown RBP eCLIP13.69□□□□□ -0.22
TMEM170A-205ENST00000568559 CLEC17AQ6ZS10 378 aa13.69□□□□□ -0.22
TMEM170A-205ENST00000568559 DPF2Q92785 391 aa13.69□□□□□ -0.22
TMEM170A-205ENST00000568559 RBSNQ9H1K0 784 aa13.69□□□□□ -0.22
TMEM170A-205ENST00000568559 MMRN2Q9H8L6 949 aa13.69□□□□□ -0.22
TMEM170A-205ENST00000568559 A0A1W2PQ27 194 aa13.68□□□□□ -0.22
TMEM170A-205ENST00000568559 A0A1W2PQ64 194 aa13.68□□□□□ -0.22
TMEM170A-205ENST00000568559 A0A1W2PQD8 194 aa13.68□□□□□ -0.22
TMEM170A-205ENST00000568559 USP17L15C9J2P7 530 aa13.68□□□□□ -0.22
TMEM170A-205ENST00000568559 USP17L13C9JLJ4 530 aa13.68□□□□□ -0.22
TMEM170A-205ENST00000568559 USP17L11C9JVI0 530 aa13.68□□□□□ -0.22
TMEM170A-205ENST00000568559 USP17L18D6R9N7 530 aa13.68□□□□□ -0.22
TMEM170A-205ENST00000568559 USP17L22D6RA61 530 aa13.68□□□□□ -0.22
TMEM170A-205ENST00000568559 USP17L17D6RBQ6 530 aa13.68□□□□□ -0.22
TMEM170A-205ENST00000568559 USP17L19D6RCP7 530 aa13.68□□□□□ -0.22
TMEM170A-205ENST00000568559 USP17L20D6RJB6 530 aa13.68□□□□□ -0.22
TMEM170A-205ENST00000568559 DDX39AO00148 427 aaKnown RBP13.68□□□□□ -0.22
TMEM170A-205ENST00000568559 FOSP01100 380 aaPredicted RBP13.68□□□□□ -0.22
TMEM170A-205ENST00000568559 ZNF445P59923 1031 aa13.68□□□□□ -0.22
TMEM170A-205ENST00000568559 USP17L24Q0WX57 530 aa13.68□□□□□ -0.22
TMEM170A-205ENST00000568559 NTRK3Q16288 839 aa13.68□□□□□ -0.22
TMEM170A-205ENST00000568559 USP17L6PQ6QN14 398 aa13.68□□□□□ -0.22
TMEM170A-205ENST00000568559 SEPT11Q9NVA2 429 aaKnown RBP13.68□□□□□ -0.22
TMEM170A-205ENST00000568559 CABP7Q86V35 215 aa13.68□□□□□ -0.22
TMEM170A-205ENST00000568559 PCDHA12Q9UN75 941 aa13.68□□□□□ -0.22
TMEM170A-205ENST00000568559 MKRN3Q13064 507 aaKnown RBP13.68□□□□□ -0.22
TMEM170A-205ENST00000568559 NBPF12Q5TAG4 269 aaPredicted RBP13.68□□□□□ -0.22
TMEM170A-205ENST00000568559 FAM83AQ86UY5 434 aa13.68□□□□□ -0.22
TMEM170A-205ENST00000568559 LUZP1Q86V48 1076 aa13.68□□□□□ -0.22
TMEM170A-205ENST00000568559 ACER1Q8TDN7 264 aa13.68□□□□□ -0.22
TMEM170A-205ENST00000568559 MAP3K14Q99558 947 aa13.68□□□□□ -0.22
TMEM170A-205ENST00000568559 CBFA2T2O43439 604 aa13.68□□□□□ -0.22
TMEM170A-205ENST00000568559 SORBS3O60504 671 aa13.68□□□□□ -0.22
TMEM170A-205ENST00000568559 ADCY5O95622 1261 aa13.68□□□□□ -0.22
TMEM170A-205ENST00000568559 CDC25AP30304 524 aa13.68□□□□□ -0.22
TMEM170A-205ENST00000568559 ECE1P42892 770 aa13.68□□□□□ -0.22
TMEM170A-205ENST00000568559 MCTP2Q6DN12 878 aa13.68□□□□□ -0.22
TMEM170A-205ENST00000568559 RASGRP2Q7LDG7 609 aa13.68□□□□□ -0.22
TMEM170A-205ENST00000568559 MCF2L2Q86YR7 1114 aa13.68□□□□□ -0.22
TMEM170A-205ENST00000568559 SYMPKQ92797 1274 aaKnown RBP13.68□□□□□ -0.22
TMEM170A-205ENST00000568559 MTMR2Q13614 643 aa13.67□□□□□ -0.22
TMEM170A-205ENST00000568559 TMEM87AQ8NBN3 555 aa13.67□□□□□ -0.22
TMEM170A-205ENST00000568559 SLC10A4Q96EP9 437 aa13.67□□□□□ -0.22
TMEM170A-205ENST00000568559 TMEM260Q9NX78 707 aa13.67□□□□□ -0.22
TMEM170A-205ENST00000568559 FAM205CA6NFA0 338 aa13.67□□□□□ -0.22
TMEM170A-205ENST00000568559 CAP2P40123 477 aa13.67□□□□□ -0.22
TMEM170A-205ENST00000568559 CT47A1Q5JQC4 288 aaPredicted RBP13.67□□□□□ -0.22
TMEM170A-205ENST00000568559 NBPF11Q86T75 865 aa13.67□□□□□ -0.22
TMEM170A-205ENST00000568559 GPC2Q8N158 579 aa13.67□□□□□ -0.22
TMEM170A-205ENST00000568559 C7orf43Q8WVR3 580 aa13.67□□□□□ -0.22
TMEM170A-205ENST00000568559 PHF20Q9BVI0 1012 aa13.67□□□□□ -0.22
TMEM170A-205ENST00000568559 FAM217BQ9NTX9 383 aaPredicted RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms