RNA–Protein interactions for RNA: ENST00000568535.1

BBS4-214, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 2

Gene BBS4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-214ENST00000568535 PNMA2Q9UL42 364 aa9.41□□□□□ -0.9
BBS4-214ENST00000568535 PCDHA7Q9UN72 937 aa9.41□□□□□ -0.9
BBS4-214ENST00000568535 MORC2Q9Y6X9 1032 aaPredicted RBP9.41□□□□□ -0.9
BBS4-214ENST00000568535 GREB1LQ9C091 1923 aaPredicted RBP9.41□□□□□ -0.9
BBS4-214ENST00000568535 SIPA1L1O43166 1804 aa9.4□□□□□ -0.9
BBS4-214ENST00000568535 C19orf81C9J6K1 198 aa9.4□□□□□ -0.9
BBS4-214ENST00000568535 CUTAO60888 179 aa9.4□□□□□ -0.9
BBS4-214ENST00000568535 CMA1P23946 247 aa9.4□□□□□ -0.9
BBS4-214ENST00000568535 ORC2Q13416 577 aaPredicted RBP9.4□□□□□ -0.9
BBS4-214ENST00000568535 CDC37Q16543 378 aaPredicted RBP9.4□□□□□ -0.9
BBS4-214ENST00000568535 SLC35G1Q2M3R5 365 aa9.4□□□□□ -0.9
BBS4-214ENST00000568535 TPRNQ4KMQ1 711 aa9.4□□□□□ -0.9
BBS4-214ENST00000568535 TTC38Q5R3I4 469 aa9.4□□□□□ -0.9
BBS4-214ENST00000568535 RASGRP2Q7LDG7 609 aa9.4□□□□□ -0.9
BBS4-214ENST00000568535 KRT26Q7Z3Y9 468 aa9.4□□□□□ -0.9
BBS4-214ENST00000568535 FBXO11Q86XK2 927 aa9.4□□□□□ -0.9
BBS4-214ENST00000568535 SPICE1Q8N0Z3 855 aa9.4□□□□□ -0.9
BBS4-214ENST00000568535 REXO1Q8N1G1 1221 aaKnown RBP9.4□□□□□ -0.9
BBS4-214ENST00000568535 KRI1Q8N9T8 703 aaKnown RBP9.4□□□□□ -0.9
BBS4-214ENST00000568535 MRPS27Q92552 414 aaKnown RBP9.4□□□□□ -0.9
BBS4-214ENST00000568535 TNFRSF25Q93038 417 aa9.4□□□□□ -0.9
BBS4-214ENST00000568535 FERMT2Q96AC1 680 aa9.4□□□□□ -0.9
BBS4-214ENST00000568535 PGBD1Q96JS3 809 aa9.4□□□□□ -0.9
BBS4-214ENST00000568535 NAP1L4Q99733 375 aaKnown RBP9.4□□□□□ -0.9
BBS4-214ENST00000568535 FTOQ9C0B1 505 aaKnown RBP eCLIP9.4□□□□□ -0.9
BBS4-214ENST00000568535 PSTPIP2Q9H939 334 aa9.4□□□□□ -0.9
BBS4-214ENST00000568535 RIC8AQ9NPQ8 531 aa9.4□□□□□ -0.9
BBS4-214ENST00000568535 PCDHA6Q9UN73 950 aa9.4□□□□□ -0.9
BBS4-214ENST00000568535 SCAF8Q9UPN6 1271 aaKnown RBP9.4□□□□□ -0.9
BBS4-214ENST00000568535 PCDHA8Q9Y5H6 950 aa9.4□□□□□ -0.9
BBS4-214ENST00000568535 GOLGB1Q14789 3259 aaKnown RBP9.4□□□□□ -0.9
BBS4-214ENST00000568535 GOLGA6L3A6NEY3 463 aa9.39□□□□□ -0.91
BBS4-214ENST00000568535 LAD1O00515 517 aa9.39□□□□□ -0.91
BBS4-214ENST00000568535 WDR46O15213 610 aaKnown RBP9.39□□□□□ -0.91
BBS4-214ENST00000568535 CTAGE5O15320 804 aa9.39□□□□□ -0.91
BBS4-214ENST00000568535 KINO60870 393 aaKnown RBP9.39□□□□□ -0.91
BBS4-214ENST00000568535 FDX1P10109 184 aa9.39□□□□□ -0.91
BBS4-214ENST00000568535 VEGFAP15692 232 aaPredicted RBP9.39□□□□□ -0.91
BBS4-214ENST00000568535 ATP2B1P20020 1258 aa9.39□□□□□ -0.91
BBS4-214ENST00000568535 IREB2P48200 963 aaKnown RBP9.39□□□□□ -0.91
BBS4-214ENST00000568535 TOB1P50616 345 aaPredicted RBP9.39□□□□□ -0.91
BBS4-214ENST00000568535 ZNF445P59923 1031 aa9.39□□□□□ -0.91
BBS4-214ENST00000568535 MAP3K9P80192 1104 aa9.39□□□□□ -0.91
BBS4-214ENST00000568535 FAM160A1Q05DH4 1040 aa9.39□□□□□ -0.91
BBS4-214ENST00000568535 NONOQ15233 471 aaKnown RBP eCLIP9.39□□□□□ -0.91
BBS4-214ENST00000568535 PTPAQ15257 358 aa9.39□□□□□ -0.91
BBS4-214ENST00000568535 NPY5RQ15761 445 aa9.39□□□□□ -0.91
BBS4-214ENST00000568535 QRICH1Q2TAL8 776 aa9.39□□□□□ -0.91
BBS4-214ENST00000568535 NOL9Q5SY16 702 aaKnown RBP9.39□□□□□ -0.91
BBS4-214ENST00000568535 FAM83BQ5T0W9 1011 aa9.39□□□□□ -0.91
BBS4-214ENST00000568535 L1TD1Q5T7N2 865 aaKnown RBP9.39□□□□□ -0.91
BBS4-214ENST00000568535 FSIP1Q8NA03 581 aa9.39□□□□□ -0.91
BBS4-214ENST00000568535 ZNF579Q8NAF0 562 aaKnown RBP9.39□□□□□ -0.91
BBS4-214ENST00000568535 ZNF280CQ8ND82 737 aa9.39□□□□□ -0.91
BBS4-214ENST00000568535 COA7Q96BR5 231 aa9.39□□□□□ -0.91
BBS4-214ENST00000568535 SHISA4Q96DD7 197 aa9.39□□□□□ -0.91
BBS4-214ENST00000568535 CCDC34Q96HJ3 373 aa9.39□□□□□ -0.91
BBS4-214ENST00000568535 NUP88Q99567 741 aaPredicted RBP9.39□□□□□ -0.91
BBS4-214ENST00000568535 NUP62CLQ9H1M0 184 aa9.39□□□□□ -0.91
BBS4-214ENST00000568535 DACT1Q9NYF0 836 aa9.39□□□□□ -0.91
BBS4-214ENST00000568535 FAM13BQ9NYF5 915 aa9.39□□□□□ -0.91
BBS4-214ENST00000568535 TMEM63CQ9P1W3 806 aa9.39□□□□□ -0.91
BBS4-214ENST00000568535 PRR12Q9ULL5 1215 aa9.39□□□□□ -0.91
BBS4-214ENST00000568535 CTDP1Q9Y5B0 961 aaPredicted RBP9.39□□□□□ -0.91
BBS4-214ENST00000568535 PCDHA1Q9Y5I3 950 aa9.39□□□□□ -0.91
BBS4-214ENST00000568535 SRPRBQ9Y5M8 271 aaKnown RBP9.39□□□□□ -0.91
BBS4-214ENST00000568535 CSADQ9Y600 493 aa9.39□□□□□ -0.91
BBS4-214ENST00000568535 SBF1O95248 1867 aa9.38□□□□□ -0.91
BBS4-214ENST00000568535 M0R2N6 131 aa9.38□□□□□ -0.91
BBS4-214ENST00000568535 FOSP01100 380 aaPredicted RBP9.38□□□□□ -0.91
BBS4-214ENST00000568535 PTPRAP18433 802 aa9.38□□□□□ -0.91
BBS4-214ENST00000568535 PTPREP23469 700 aa9.38□□□□□ -0.91
BBS4-214ENST00000568535 MARCKSP29966 332 aaPredicted RBP9.38□□□□□ -0.91
BBS4-214ENST00000568535 INPP5BP32019 993 aa9.38□□□□□ -0.91
BBS4-214ENST00000568535 BACE1P56817 501 aa9.38□□□□□ -0.91
BBS4-214ENST00000568535 ZNF174Q15697 407 aa9.38□□□□□ -0.91
BBS4-214ENST00000568535 ZYXQ15942 572 aaKnown RBP9.38□□□□□ -0.91
BBS4-214ENST00000568535 TYW1BQ6NUM6 668 aa9.38□□□□□ -0.91
BBS4-214ENST00000568535 PRPF38AQ8NAV1 312 aaKnown RBP9.38□□□□□ -0.91
BBS4-214ENST00000568535 RBM46Q8TBY0 533 aaKnown RBP9.38□□□□□ -0.91
BBS4-214ENST00000568535 KIFC2Q96AC6 838 aa9.38□□□□□ -0.91
BBS4-214ENST00000568535 PYM1Q9BRP8 204 aaKnown RBP9.38□□□□□ -0.91
BBS4-214ENST00000568535 TNMDQ9H2S6 317 aa9.38□□□□□ -0.91
BBS4-214ENST00000568535 TMOD4Q9NZQ9 345 aa9.38□□□□□ -0.91
BBS4-214ENST00000568535 HOOK1Q9UJC3 728 aaKnown RBP9.38□□□□□ -0.91
BBS4-214ENST00000568535 PCDHB6Q9Y5E3 794 aa9.38□□□□□ -0.91
BBS4-214ENST00000568535 ZHX2Q9Y6X8 837 aa9.38□□□□□ -0.91
BBS4-214ENST00000568535 ZBED4O75132 1171 aa9.37□□□□□ -0.91
BBS4-214ENST00000568535 USP2O75604 605 aaPredicted RBP9.37□□□□□ -0.91
BBS4-214ENST00000568535 LIG1P18858 919 aa9.37□□□□□ -0.91
BBS4-214ENST00000568535 MLLT1Q03111 559 aaPredicted RBP9.37□□□□□ -0.91
BBS4-214ENST00000568535 SPP2Q13103 211 aa9.37□□□□□ -0.91
BBS4-214ENST00000568535 AP3B2Q13367 1082 aa9.37□□□□□ -0.91
BBS4-214ENST00000568535 MAP3K11Q16584 847 aa9.37□□□□□ -0.91
BBS4-214ENST00000568535 EAPPQ56P03 285 aaPredicted RBP9.37□□□□□ -0.91
BBS4-214ENST00000568535 PRAMEF18Q5VWM3 479 aa9.37□□□□□ -0.91
BBS4-214ENST00000568535 ARL6IP4Q66PJ3 421 aaKnown RBP9.37□□□□□ -0.91
BBS4-214ENST00000568535 LRSAM1Q6UWE0 723 aa9.37□□□□□ -0.91
BBS4-214ENST00000568535 NEK8Q86SG6 692 aa9.37□□□□□ -0.91
BBS4-214ENST00000568535 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms