RNA–Protein interactions for RNA: ENST00000567880.5

TCF4-236, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-236ENST00000567880 TRPM7Q96QT4 1865 aa12□□□□□ -0.49
TCF4-236ENST00000567880 ZBTB5O15062 677 aa12□□□□□ -0.49
TCF4-236ENST00000567880 PRPF40AO75400 957 aaKnown RBP12□□□□□ -0.49
TCF4-236ENST00000567880 USP14P54578 494 aa12□□□□□ -0.49
TCF4-236ENST00000567880 HMGCS2P54868 508 aa12□□□□□ -0.49
TCF4-236ENST00000567880 BACE1P56817 501 aa12□□□□□ -0.49
TCF4-236ENST00000567880 QRICH1Q2TAL8 776 aa12□□□□□ -0.49
TCF4-236ENST00000567880 ARMC9Q7Z3E5 817 aa12□□□□□ -0.49
TCF4-236ENST00000567880 NOSTRINQ8IVI9 506 aa12□□□□□ -0.49
TCF4-236ENST00000567880 ANKRD13AQ8IZ07 590 aa12□□□□□ -0.49
TCF4-236ENST00000567880 CCDC148Q8NFR7 591 aa12□□□□□ -0.49
TCF4-236ENST00000567880 LPAR1Q92633 364 aa12□□□□□ -0.49
TCF4-236ENST00000567880 KIFC2Q96AC6 838 aa12□□□□□ -0.49
TCF4-236ENST00000567880 CLMNQ96JQ2 1002 aa12□□□□□ -0.49
TCF4-236ENST00000567880 FAM117AQ9C073 453 aa12□□□□□ -0.49
TCF4-236ENST00000567880 TANGO6Q9C0B7 1094 aa12□□□□□ -0.49
TCF4-236ENST00000567880 SH3GLB2Q9NR46 395 aa12□□□□□ -0.49
TCF4-236ENST00000567880 PRR12Q9ULL5 1215 aa12□□□□□ -0.49
TCF4-236ENST00000567880 COL11A1P12107 1806 aaPredicted RBP12□□□□□ -0.49
TCF4-236ENST00000567880 WDR46O15213 610 aaKnown RBP11.99□□□□□ -0.49
TCF4-236ENST00000567880 PPP1R11O60927 126 aaPredicted RBP11.99□□□□□ -0.49
TCF4-236ENST00000567880 VCAM1P19320 739 aa11.99□□□□□ -0.49
TCF4-236ENST00000567880 U2AF2P26368 475 aaKnown RBP eCLIP11.99□□□□□ -0.49
TCF4-236ENST00000567880 MYSM1Q5VVJ2 828 aa11.99□□□□□ -0.49
TCF4-236ENST00000567880 FTOQ9C0B1 505 aaKnown RBP eCLIP11.99□□□□□ -0.49
TCF4-236ENST00000567880 FOXP1Q9H334 677 aaPredicted RBP11.99□□□□□ -0.49
TCF4-236ENST00000567880 EMILIN3Q9NT22 766 aa11.99□□□□□ -0.49
TCF4-236ENST00000567880 FBXO28Q9NVF7 368 aa11.99□□□□□ -0.49
TCF4-236ENST00000567880 CALML3P27482 149 aa11.99□□□□□ -0.49
TCF4-236ENST00000567880 NPY5RQ15761 445 aa11.99□□□□□ -0.49
TCF4-236ENST00000567880 BTNL9Q6UXG8 535 aa11.99□□□□□ -0.49
TCF4-236ENST00000567880 CCDC12Q8WUD4 166 aaPredicted RBP11.99□□□□□ -0.49
TCF4-236ENST00000567880 CHURC1Q8WUH1 139 aa11.99□□□□□ -0.49
TCF4-236ENST00000567880 MTMR8Q96EF0 704 aa11.99□□□□□ -0.49
TCF4-236ENST00000567880 OTUD5Q96G74 571 aa11.99□□□□□ -0.49
TCF4-236ENST00000567880 ZNF396Q96N95 335 aaPredicted RBP11.99□□□□□ -0.49
TCF4-236ENST00000567880 FEM1BQ9UK73 627 aa11.99□□□□□ -0.49
TCF4-236ENST00000567880 AFG3L2Q9Y4W6 797 aa11.99□□□□□ -0.49
TCF4-236ENST00000567880 SMCO2A6NFE2 343 aa11.98□□□□□ -0.49
TCF4-236ENST00000567880 hCG_1984214I3L0E3 225 aa11.98□□□□□ -0.49
TCF4-236ENST00000567880 ADAMTS3O15072 1205 aa11.98□□□□□ -0.49
TCF4-236ENST00000567880 USH1GQ495M9 461 aa11.98□□□□□ -0.49
TCF4-236ENST00000567880 FAM160B2Q86V87 743 aa11.98□□□□□ -0.49
TCF4-236ENST00000567880 BLIDQ8IZY5 108 aa11.98□□□□□ -0.49
TCF4-236ENST00000567880 ZNF713Q8N859 430 aaPredicted RBP11.98□□□□□ -0.49
TCF4-236ENST00000567880 RASGRP4Q8TDF6 673 aa11.98□□□□□ -0.49
TCF4-236ENST00000567880 SPATA32Q96LK8 384 aa11.98□□□□□ -0.49
TCF4-236ENST00000567880 USP28Q96RU2 1077 aa11.98□□□□□ -0.49
TCF4-236ENST00000567880 RPAP3Q9H6T3 665 aaPredicted RBP11.98□□□□□ -0.49
TCF4-236ENST00000567880 CFAP45Q9UL16 551 aa11.98□□□□□ -0.49
TCF4-236ENST00000567880 PCDHA4Q9UN74 947 aa11.98□□□□□ -0.49
TCF4-236ENST00000567880 RLFQ13129 1914 aa11.98□□□□□ -0.49
TCF4-236ENST00000567880 FAM205CA6NFA0 338 aa11.98□□□□□ -0.49
TCF4-236ENST00000567880 C19orf81C9J6K1 198 aa11.98□□□□□ -0.49
TCF4-236ENST00000567880 FLOT1O75955 427 aa11.98□□□□□ -0.49
TCF4-236ENST00000567880 ATP2B1P20020 1258 aa11.98□□□□□ -0.49
TCF4-236ENST00000567880 MAP3K11Q16584 847 aa11.98□□□□□ -0.49
TCF4-236ENST00000567880 NOM1Q5C9Z4 860 aaKnown RBP11.98□□□□□ -0.49
TCF4-236ENST00000567880 CCDC174Q6PII3 467 aa11.98□□□□□ -0.49
TCF4-236ENST00000567880 ZMYND12Q9H0C1 365 aa11.98□□□□□ -0.49
TCF4-236ENST00000567880 C6orf50Q9HD87 102 aa11.98□□□□□ -0.49
TCF4-236ENST00000567880 LMBRD1Q9NUN5 540 aa11.98□□□□□ -0.49
TCF4-236ENST00000567880 TMOD4Q9NZQ9 345 aa11.98□□□□□ -0.49
TCF4-236ENST00000567880 PCDHA1Q9Y5I3 950 aa11.98□□□□□ -0.49
TCF4-236ENST00000567880 MYH7BA7E2Y1 1941 aa11.97□□□□□ -0.49
TCF4-236ENST00000567880 IRF6O14896 467 aa11.97□□□□□ -0.49
TCF4-236ENST00000567880 TAL1P17542 331 aaPredicted RBP11.97□□□□□ -0.49
TCF4-236ENST00000567880 GSE1Q14687 1217 aa11.97□□□□□ -0.49
TCF4-236ENST00000567880 EARS2Q5JPH6 523 aaKnown RBP11.97□□□□□ -0.49
TCF4-236ENST00000567880 PIK3AP1Q6ZUJ8 805 aa11.97□□□□□ -0.49
TCF4-236ENST00000567880 FBXO11Q86XK2 927 aa11.97□□□□□ -0.49
TCF4-236ENST00000567880 ERO1BQ86YB8 467 aa11.97□□□□□ -0.49
TCF4-236ENST00000567880 AMNQ9BXJ7 453 aa11.97□□□□□ -0.49
TCF4-236ENST00000567880 SCAND2PQ9GZW5 306 aaPredicted RBP11.97□□□□□ -0.49
TCF4-236ENST00000567880 LOC285556D6RIA3 1793 aa11.97□□□□□ -0.49
TCF4-236ENST00000567880 CELF2O95319 508 aaKnown RBP11.96□□□□□ -0.49
TCF4-236ENST00000567880 GNA11P29992 359 aa11.96□□□□□ -0.49
TCF4-236ENST00000567880 ADCY7P51828 1080 aa11.96□□□□□ -0.49
TCF4-236ENST00000567880 PPATQ06203 517 aa11.96□□□□□ -0.49
TCF4-236ENST00000567880 CSPP1Q1MSJ5 1256 aa11.96□□□□□ -0.49
TCF4-236ENST00000567880 PRPF38AQ8NAV1 312 aaKnown RBP11.96□□□□□ -0.49
TCF4-236ENST00000567880 RBM46Q8TBY0 533 aaKnown RBP11.96□□□□□ -0.49
TCF4-236ENST00000567880 TNFRSF25Q93038 417 aa11.96□□□□□ -0.49
TCF4-236ENST00000567880 SLF1Q9BQI6 1058 aa11.96□□□□□ -0.49
TCF4-236ENST00000567880 CLIC4Q9Y696 253 aa11.96□□□□□ -0.49
TCF4-236ENST00000567880 SPDYE5A6NIY4 337 aa11.96□□□□□ -0.5
TCF4-236ENST00000567880 PLA2G6O60733 806 aa11.96□□□□□ -0.5
TCF4-236ENST00000567880 PTMSP20962 102 aa11.96□□□□□ -0.5
TCF4-236ENST00000567880 ATL3Q6DD88 541 aa11.96□□□□□ -0.5
TCF4-236ENST00000567880 GALNT17Q6IS24 598 aa11.96□□□□□ -0.5
TCF4-236ENST00000567880 CHADLQ6NUI6 762 aa11.96□□□□□ -0.5
TCF4-236ENST00000567880 DAGLBQ8NCG7 672 aa11.96□□□□□ -0.5
TCF4-236ENST00000567880 LEO1Q8WVC0 666 aaPredicted RBP11.96□□□□□ -0.5
TCF4-236ENST00000567880 OPTNQ96CV9 577 aa11.96□□□□□ -0.5
TCF4-236ENST00000567880 C12orf42Q96LP6 360 aa11.96□□□□□ -0.5
TCF4-236ENST00000567880 GBA2Q9HCG7 927 aaPredicted RBP11.96□□□□□ -0.5
TCF4-236ENST00000567880 BIN2Q9UBW5 565 aaPredicted RBP11.96□□□□□ -0.5
TCF4-236ENST00000567880 PCDHA6Q9UN73 950 aa11.96□□□□□ -0.5
TCF4-236ENST00000567880 PCDHA8Q9Y5H6 950 aa11.96□□□□□ -0.5
TCF4-236ENST00000567880 CCDC194A0A1B0GVG4 234 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms