RNA–Protein interactions for RNA: ENST00000567638.1

SCAMP2-209, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 678 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-209ENST00000567638 ZNF536O15090 1300 aa17.81■□□□□ 0.44
SCAMP2-209ENST00000567638 CCDC171Q6TFL3 1326 aa17.81■□□□□ 0.44
SCAMP2-209ENST00000567638 TRIM6-TRIM34B2RNG4 842 aa17.81■□□□□ 0.44
SCAMP2-209ENST00000567638 FGAP02671 866 aa17.81■□□□□ 0.44
SCAMP2-209ENST00000567638 HSPD1P10809 573 aaKnown RBP17.81■□□□□ 0.44
SCAMP2-209ENST00000567638 RCSD1Q6JBY9 416 aa17.81■□□□□ 0.44
SCAMP2-209ENST00000567638 GPR153Q6NV75 609 aa17.81■□□□□ 0.44
SCAMP2-209ENST00000567638 KCTD1Q719H9 257 aa17.81■□□□□ 0.44
SCAMP2-209ENST00000567638 RASGRP2Q7LDG7 609 aa17.81■□□□□ 0.44
SCAMP2-209ENST00000567638 ZNF589Q86UQ0 364 aaPredicted RBP17.81■□□□□ 0.44
SCAMP2-209ENST00000567638 RILPL2Q969X0 211 aa17.81■□□□□ 0.44
SCAMP2-209ENST00000567638 ACAD9Q9H845 621 aa17.81■□□□□ 0.44
SCAMP2-209ENST00000567638 HOMER2Q9NSB8 354 aa17.81■□□□□ 0.44
SCAMP2-209ENST00000567638 ZHX1Q9UKY1 873 aaPredicted RBP17.81■□□□□ 0.44
SCAMP2-209ENST00000567638 DNAH12Q6ZR08 3092 aa17.81■□□□□ 0.44
SCAMP2-209ENST00000567638 SYNRGQ9UMZ2 1314 aa17.8■□□□□ 0.44
SCAMP2-209ENST00000567638 ADAMTS4O75173 837 aa17.8■□□□□ 0.44
SCAMP2-209ENST00000567638 CHD1LQ86WJ1 897 aa17.8■□□□□ 0.44
SCAMP2-209ENST00000567638 AGBL1Q96MI9 1066 aa17.8■□□□□ 0.44
SCAMP2-209ENST00000567638 TOMM22Q9NS69 142 aa17.8■□□□□ 0.44
SCAMP2-209ENST00000567638 RNF146Q9NTX7 359 aa17.8■□□□□ 0.44
SCAMP2-209ENST00000567638 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.8■□□□□ 0.44
SCAMP2-209ENST00000567638 FAM184BQ9ULE4 1060 aa17.8■□□□□ 0.44
SCAMP2-209ENST00000567638 IGHDP01880 384 aa17.79■□□□□ 0.44
SCAMP2-209ENST00000567638 NUCB1Q02818 461 aa17.79■□□□□ 0.44
SCAMP2-209ENST00000567638 TKFCQ3LXA3 575 aa17.79■□□□□ 0.44
SCAMP2-209ENST00000567638 RRP12Q5JTH9 1297 aaKnown RBP17.79■□□□□ 0.44
SCAMP2-209ENST00000567638 PLEKHM2Q8IWE5 1019 aa17.79■□□□□ 0.44
SCAMP2-209ENST00000567638 EXOC6Q8TAG9 804 aa17.79■□□□□ 0.44
SCAMP2-209ENST00000567638 ABHD16BQ9H3Z7 469 aa17.79■□□□□ 0.44
SCAMP2-209ENST00000567638 OSBPL3Q9H4L5 887 aa17.79■□□□□ 0.44
SCAMP2-209ENST00000567638 PRDM5Q9NQX1 630 aaPredicted RBP17.79■□□□□ 0.44
SCAMP2-209ENST00000567638 PDLIM7Q9NR12 457 aa17.79■□□□□ 0.44
SCAMP2-209ENST00000567638 PRR12Q9ULL5 1215 aa17.79■□□□□ 0.44
SCAMP2-209ENST00000567638 A0A1W2PQ45 241 aaPredicted RBP17.78■□□□□ 0.44
SCAMP2-209ENST00000567638 A0A1W2PQY0 241 aa17.78■□□□□ 0.44
SCAMP2-209ENST00000567638 ACVR2BQ13705 512 aa17.78■□□□□ 0.44
SCAMP2-209ENST00000567638 CCDC96Q2M329 555 aa17.78■□□□□ 0.44
SCAMP2-209ENST00000567638 ARMCX2Q7L311 632 aa17.78■□□□□ 0.44
SCAMP2-209ENST00000567638 FAM133AQ8N9E0 248 aa17.78■□□□□ 0.44
SCAMP2-209ENST00000567638 DCAF4Q8WV16 495 aa17.78■□□□□ 0.44
SCAMP2-209ENST00000567638 TSEN34Q9BSV6 310 aaKnown RBP17.78■□□□□ 0.44
SCAMP2-209ENST00000567638 A1CFQ9NQ94 594 aaKnown RBP17.78■□□□□ 0.44
SCAMP2-209ENST00000567638 MTMR7Q9Y216 660 aa17.78■□□□□ 0.44
SCAMP2-209ENST00000567638 POTEB2H3BUK9 544 aa17.77■□□□□ 0.44
SCAMP2-209ENST00000567638 DUSP11O75319 330 aaKnown RBP17.77■□□□□ 0.44
SCAMP2-209ENST00000567638 ALAS1P13196 640 aa17.77■□□□□ 0.44
SCAMP2-209ENST00000567638 SDSP20132 328 aa17.77■□□□□ 0.44
SCAMP2-209ENST00000567638 MFAP1P55081 439 aaKnown RBP17.77■□□□□ 0.44
SCAMP2-209ENST00000567638 HAND2P61296 217 aa17.77■□□□□ 0.44
SCAMP2-209ENST00000567638 CNTN2Q02246 1040 aa17.77■□□□□ 0.44
SCAMP2-209ENST00000567638 TLE2Q04725 743 aa17.77■□□□□ 0.44
SCAMP2-209ENST00000567638 CCDC174Q6PII3 467 aa17.77■□□□□ 0.44
SCAMP2-209ENST00000567638 CCDC144CPQ8IYA2 1237 aa17.77■□□□□ 0.44
SCAMP2-209ENST00000567638 TRERF1Q96PN7 1200 aa17.77■□□□□ 0.44
SCAMP2-209ENST00000567638 TCP11L1Q9NUJ3 509 aa17.77■□□□□ 0.44
SCAMP2-209ENST00000567638 MOXD2PA6NHM9 499 aa17.76■□□□□ 0.43
SCAMP2-209ENST00000567638 ADCY6O43306 1168 aa17.76■□□□□ 0.43
SCAMP2-209ENST00000567638 TOP1P11387 765 aaKnown RBP17.76■□□□□ 0.43
SCAMP2-209ENST00000567638 PCP11498 1178 aaKnown RBP17.76■□□□□ 0.43
SCAMP2-209ENST00000567638 ACLYP53396 1101 aa17.76■□□□□ 0.43
SCAMP2-209ENST00000567638 SNAP25P60880 206 aa17.76■□□□□ 0.43
SCAMP2-209ENST00000567638 CCDC144BQ3MJ40 725 aa17.76■□□□□ 0.43
SCAMP2-209ENST00000567638 AKNAD1Q5T1N1 836 aa17.76■□□□□ 0.43
SCAMP2-209ENST00000567638 SH3RF1Q7Z6J0 888 aa17.76■□□□□ 0.43
SCAMP2-209ENST00000567638 KLHDC9Q8NEP7 349 aa17.76■□□□□ 0.43
SCAMP2-209ENST00000567638 TMEM47Q9BQJ4 181 aa17.76■□□□□ 0.43
SCAMP2-209ENST00000567638 KATNBL1Q9H079 304 aa17.76■□□□□ 0.43
SCAMP2-209ENST00000567638 MYH6P13533 1939 aa17.76■□□□□ 0.43
SCAMP2-209ENST00000567638 TRIM43BA6NCK2 446 aa17.75■□□□□ 0.43
SCAMP2-209ENST00000567638 MYADML2A6NDP7 307 aa17.75■□□□□ 0.43
SCAMP2-209ENST00000567638 CST5P28325 142 aaPredicted RBP17.75■□□□□ 0.43
SCAMP2-209ENST00000567638 MUM1L1Q5H9M0 696 aa17.75■□□□□ 0.43
SCAMP2-209ENST00000567638 CCSAPQ6IQ19 270 aaPredicted RBP17.75■□□□□ 0.43
SCAMP2-209ENST00000567638 BTNL9Q6UXG8 535 aa17.75■□□□□ 0.43
SCAMP2-209ENST00000567638 MFSD6Q6ZSS7 791 aa17.75■□□□□ 0.43
SCAMP2-209ENST00000567638 TBC1D10CQ8IV04 446 aa17.75■□□□□ 0.43
SCAMP2-209ENST00000567638 NUP133Q8WUM0 1156 aa17.75■□□□□ 0.43
SCAMP2-209ENST00000567638 TRIM43Q96BQ3 446 aaPredicted RBP17.75■□□□□ 0.43
SCAMP2-209ENST00000567638 UPF3AQ9H1J1 476 aaKnown RBP17.75■□□□□ 0.43
SCAMP2-209ENST00000567638 RANBP17Q9H2T7 1088 aaKnown RBP17.75■□□□□ 0.43
SCAMP2-209ENST00000567638 STARD7Q9NQZ5 370 aa17.75■□□□□ 0.43
SCAMP2-209ENST00000567638 CCPG1Q9ULG6 757 aa17.75■□□□□ 0.43
SCAMP2-209ENST00000567638 SOWAHBA6NEL2 793 aa17.74■□□□□ 0.43
SCAMP2-209ENST00000567638 ASB14A6NK59 587 aa17.74■□□□□ 0.43
SCAMP2-209ENST00000567638 ICAM1P05362 532 aa17.74■□□□□ 0.43
SCAMP2-209ENST00000567638 CLTBP09497 229 aa17.74■□□□□ 0.43
SCAMP2-209ENST00000567638 C6orf222P0C671 652 aaPredicted RBP17.74■□□□□ 0.43
SCAMP2-209ENST00000567638 KCNA10Q16322 511 aa17.74■□□□□ 0.43
SCAMP2-209ENST00000567638 TTBK2Q6IQ55 1244 aa17.74■□□□□ 0.43
SCAMP2-209ENST00000567638 Q7L0L9 218 aa17.74■□□□□ 0.43
SCAMP2-209ENST00000567638 DEFB123Q8N688 67 aa17.74■□□□□ 0.43
SCAMP2-209ENST00000567638 BADQ92934 168 aa17.74■□□□□ 0.43
SCAMP2-209ENST00000567638 RNF41Q9H4P4 317 aaPredicted RBP17.74■□□□□ 0.43
SCAMP2-209ENST00000567638 CYP39A1Q9NYL5 469 aa17.74■□□□□ 0.43
SCAMP2-209ENST00000567638 ASTN1O14525 1302 aa17.73■□□□□ 0.43
SCAMP2-209ENST00000567638 FRMPD2Q68DX3 1309 aaPredicted RBP17.73■□□□□ 0.43
SCAMP2-209ENST00000567638 PQBP1O60828 265 aaKnown RBP17.73■□□□□ 0.43
SCAMP2-209ENST00000567638 PDHBP11177 359 aa17.73■□□□□ 0.43
SCAMP2-209ENST00000567638 SLC16A2P36021 539 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms