RNA–Protein interactions for RNA: ENST00000567399.5

COMMD4-219, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-219ENST00000567399 RANBP17Q9H2T7 1088 aaKnown RBP17.65■□□□□ 0.42
COMMD4-219ENST00000567399 CPVLQ9H3G5 476 aa17.65■□□□□ 0.42
COMMD4-219ENST00000567399 HOMER2Q9NSB8 354 aa17.65■□□□□ 0.42
COMMD4-219ENST00000567399 SLC5A4Q9NY91 659 aa17.65■□□□□ 0.42
COMMD4-219ENST00000567399 MAD2L2Q9UI95 211 aa17.65■□□□□ 0.42
COMMD4-219ENST00000567399 PNMA2Q9UL42 364 aa17.65■□□□□ 0.42
COMMD4-219ENST00000567399 ATP2A1O14983 1001 aa17.64■□□□□ 0.41
COMMD4-219ENST00000567399 ADCY3O60266 1144 aa17.64■□□□□ 0.41
COMMD4-219ENST00000567399 RXRAP19793 462 aa17.64■□□□□ 0.41
COMMD4-219ENST00000567399 GNAQP50148 359 aa17.64■□□□□ 0.41
COMMD4-219ENST00000567399 ANAPC15P60006 121 aa17.64■□□□□ 0.41
COMMD4-219ENST00000567399 TROAPQ12815 778 aa17.64■□□□□ 0.41
COMMD4-219ENST00000567399 MICU3Q86XE3 530 aa17.64■□□□□ 0.41
COMMD4-219ENST00000567399 RAB11FIP4Q86YS3 637 aa17.64■□□□□ 0.41
COMMD4-219ENST00000567399 DDX11Q96FC9 970 aa17.64■□□□□ 0.41
COMMD4-219ENST00000567399 TM6SF1Q9BZW5 370 aa17.64■□□□□ 0.41
COMMD4-219ENST00000567399 ZSWIM6Q9HCJ5 1215 aa17.64■□□□□ 0.41
COMMD4-219ENST00000567399 FBXO40Q9UH90 709 aa17.64■□□□□ 0.41
COMMD4-219ENST00000567399 HPS5Q9UPZ3 1129 aa17.64■□□□□ 0.41
COMMD4-219ENST00000567399 KLF18A0A0U1RQI7 1052 aa17.63■□□□□ 0.41
COMMD4-219ENST00000567399 PALM3A6NDB9 673 aaPredicted RBP17.63■□□□□ 0.41
COMMD4-219ENST00000567399 ZBTB43O43298 467 aa17.63■□□□□ 0.41
COMMD4-219ENST00000567399 ICAM1P05362 532 aa17.63■□□□□ 0.41
COMMD4-219ENST00000567399 MAP2K5Q13163 448 aa17.63■□□□□ 0.41
COMMD4-219ENST00000567399 TKFCQ3LXA3 575 aa17.63■□□□□ 0.41
COMMD4-219ENST00000567399 SGMS1Q86VZ5 419 aa17.63■□□□□ 0.41
COMMD4-219ENST00000567399 ANKRD35Q8N283 1001 aa17.63■□□□□ 0.41
COMMD4-219ENST00000567399 CHST13Q8NET6 341 aa17.63■□□□□ 0.41
COMMD4-219ENST00000567399 BRF1Q92994 677 aa17.63■□□□□ 0.41
COMMD4-219ENST00000567399 TRERF1Q96PN7 1200 aa17.63■□□□□ 0.41
COMMD4-219ENST00000567399 MAP3K14Q99558 947 aa17.63■□□□□ 0.41
COMMD4-219ENST00000567399 UPF3BQ9BZI7 483 aaKnown RBP17.63■□□□□ 0.41
COMMD4-219ENST00000567399 PDRG1Q9NUG6 133 aa17.63■□□□□ 0.41
COMMD4-219ENST00000567399 GJD2Q9UKL4 321 aa17.63■□□□□ 0.41
COMMD4-219ENST00000567399 RIPK3Q9Y572 518 aa17.63■□□□□ 0.41
COMMD4-219ENST00000567399 ZSWIM8A7E2V4 1837 aa17.63■□□□□ 0.41
COMMD4-219ENST00000567399 RLFQ13129 1914 aa17.62■□□□□ 0.41
COMMD4-219ENST00000567399 ADORA2AP29274 412 aa17.62■□□□□ 0.41
COMMD4-219ENST00000567399 GRK4P32298 578 aa17.62■□□□□ 0.41
COMMD4-219ENST00000567399 APOBRQ0VD83 1088 aa17.62■□□□□ 0.41
COMMD4-219ENST00000567399 IRF5Q13568 498 aa17.62■□□□□ 0.41
COMMD4-219ENST00000567399 CDC37Q16543 378 aaPredicted RBP17.62■□□□□ 0.41
COMMD4-219ENST00000567399 MORN1Q5T089 497 aa17.62■□□□□ 0.41
COMMD4-219ENST00000567399 HOMER1Q86YM7 354 aa17.62■□□□□ 0.41
COMMD4-219ENST00000567399 FANCBQ8NB91 859 aa17.62■□□□□ 0.41
COMMD4-219ENST00000567399 SLAIN1Q8ND83 568 aa17.62■□□□□ 0.41
COMMD4-219ENST00000567399 ABHD8Q96I13 439 aa17.62■□□□□ 0.41
COMMD4-219ENST00000567399 LZTS2Q9BRK4 669 aa17.62■□□□□ 0.41
COMMD4-219ENST00000567399 RNF146Q9NTX7 359 aa17.62■□□□□ 0.41
COMMD4-219ENST00000567399 MGAMO43451 1857 aa17.62■□□□□ 0.41
COMMD4-219ENST00000567399 A0A0G2JMZ2 1700 aa17.61■□□□□ 0.41
COMMD4-219ENST00000567399 CCDC85CA6NKD9 419 aa17.61■□□□□ 0.41
COMMD4-219ENST00000567399 GOLGA8AA7E2F4 631 aa17.61■□□□□ 0.41
COMMD4-219ENST00000567399 GOLGA8BA8MQT2 603 aa17.61■□□□□ 0.41
COMMD4-219ENST00000567399 MYCP01106 439 aaPredicted RBP17.61■□□□□ 0.41
COMMD4-219ENST00000567399 UBXN2AP68543 259 aa17.61■□□□□ 0.41
COMMD4-219ENST00000567399 GRB14Q14449 540 aa17.61■□□□□ 0.41
COMMD4-219ENST00000567399 USH1GQ495M9 461 aa17.61■□□□□ 0.41
COMMD4-219ENST00000567399 APOA5Q6Q788 366 aa17.61■□□□□ 0.41
COMMD4-219ENST00000567399 TRMT44Q8IYL2 757 aaKnown RBP17.61■□□□□ 0.41
COMMD4-219ENST00000567399 SH3TC2Q8TF17 1288 aa17.61■□□□□ 0.41
COMMD4-219ENST00000567399 PIBF1Q8WXW3 757 aa17.61■□□□□ 0.41
COMMD4-219ENST00000567399 ACAD9Q9H845 621 aa17.61■□□□□ 0.41
COMMD4-219ENST00000567399 JMJD4Q9H9V9 463 aa17.61■□□□□ 0.41
COMMD4-219ENST00000567399 RBM28Q9NW13 759 aaKnown RBP17.61■□□□□ 0.41
COMMD4-219ENST00000567399 PARP14Q460N5 1801 aa17.61■□□□□ 0.41
COMMD4-219ENST00000567399 ELNP15502 786 aa17.6■□□□□ 0.41
COMMD4-219ENST00000567399 RTN1Q16799 776 aa17.6■□□□□ 0.41
COMMD4-219ENST00000567399 FBXO11Q86XK2 927 aa17.6■□□□□ 0.41
COMMD4-219ENST00000567399 ABRAQ8N0Z2 381 aa17.6■□□□□ 0.41
COMMD4-219ENST00000567399 PXYLP1Q8TE99 480 aa17.6■□□□□ 0.41
COMMD4-219ENST00000567399 APBA2Q99767 749 aa17.6■□□□□ 0.41
COMMD4-219ENST00000567399 C22orf23Q9BZE7 217 aa17.6■□□□□ 0.41
COMMD4-219ENST00000567399 SEC63Q9UGP8 760 aaKnown RBP17.6■□□□□ 0.41
COMMD4-219ENST00000567399 BRPF3Q9ULD4 1205 aa17.6■□□□□ 0.41
COMMD4-219ENST00000567399 ZNF536O15090 1300 aa17.6■□□□□ 0.41
COMMD4-219ENST00000567399 COL11A1P12107 1806 aaPredicted RBP17.6■□□□□ 0.41
COMMD4-219ENST00000567399 XRCC5P13010 732 aaKnown RBP17.59■□□□□ 0.41
COMMD4-219ENST00000567399 METAP2P50579 478 aaKnown RBP eCLIP17.59■□□□□ 0.41
COMMD4-219ENST00000567399 TRAF1Q13077 416 aa17.59■□□□□ 0.41
COMMD4-219ENST00000567399 QRICH1Q2TAL8 776 aa17.59■□□□□ 0.41
COMMD4-219ENST00000567399 CCDC82Q8N4S0 544 aa17.59■□□□□ 0.41
COMMD4-219ENST00000567399 RRP36Q96EU6 259 aaKnown RBP17.59■□□□□ 0.41
COMMD4-219ENST00000567399 CCDC196A0A1B0GTZ2 297 aa17.58■□□□□ 0.4
COMMD4-219ENST00000567399 ZBTB5O15062 677 aa17.58■□□□□ 0.4
COMMD4-219ENST00000567399 PGK2P07205 417 aa17.58■□□□□ 0.4
COMMD4-219ENST00000567399 NSMFQ6X4W1 530 aa17.58■□□□□ 0.4
COMMD4-219ENST00000567399 CMTR1Q8N1G2 835 aaKnown RBP17.58■□□□□ 0.4
COMMD4-219ENST00000567399 PIGSQ96S52 555 aa17.58■□□□□ 0.4
COMMD4-219ENST00000567399 AMNQ9BXJ7 453 aa17.58■□□□□ 0.4
COMMD4-219ENST00000567399 RIOX1Q9H6W3 641 aa17.58■□□□□ 0.4
COMMD4-219ENST00000567399 ABCB11O95342 1321 aa17.57■□□□□ 0.4
COMMD4-219ENST00000567399 PTPDC1A2A3K4 754 aa17.57■□□□□ 0.4
COMMD4-219ENST00000567399 POTEB2H3BUK9 544 aa17.57■□□□□ 0.4
COMMD4-219ENST00000567399 COBLO75128 1261 aa17.57■□□□□ 0.4
COMMD4-219ENST00000567399 PLEKHA8P1O95397 391 aa17.57■□□□□ 0.4
COMMD4-219ENST00000567399 HMGCRP04035 888 aa17.57■□□□□ 0.4
COMMD4-219ENST00000567399 TAL1P17542 331 aaPredicted RBP17.57■□□□□ 0.4
COMMD4-219ENST00000567399 SMARCA1P28370 1054 aa17.57■□□□□ 0.4
COMMD4-219ENST00000567399 PPP2R5BQ15173 497 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms