RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 VMACQ2NL98 169 aa5.83□□□□□ -1.48
CDH1-211ENST00000567320 CNKSR3Q6P9H4 555 aa5.83□□□□□ -1.48
CDH1-211ENST00000567320 SLITRK4Q8IW52 837 aa5.83□□□□□ -1.48
CDH1-211ENST00000567320 C7orf61Q8IZ16 206 aa5.83□□□□□ -1.48
CDH1-211ENST00000567320 MARCH10Q8NA82 808 aaPredicted RBP5.83□□□□□ -1.48
CDH1-211ENST00000567320 MZB1Q8WU39 189 aa5.83□□□□□ -1.48
CDH1-211ENST00000567320 EAF1Q96JC9 268 aaPredicted RBP5.83□□□□□ -1.48
CDH1-211ENST00000567320 C20orf173Q96LM9 149 aa5.83□□□□□ -1.48
CDH1-211ENST00000567320 IMPACTQ9P2X3 320 aa5.83□□□□□ -1.48
CDH1-211ENST00000567320 SUCOQ9UBS9 1254 aaKnown RBP5.83□□□□□ -1.48
CDH1-211ENST00000567320 MEIS3P2A8K0S8 358 aa5.82□□□□□ -1.48
CDH1-211ENST00000567320 TRIM13O60858 407 aa5.82□□□□□ -1.48
CDH1-211ENST00000567320 TP53P04637 393 aaPredicted RBP5.82□□□□□ -1.48
CDH1-211ENST00000567320 GSNP06396 782 aa5.82□□□□□ -1.48
CDH1-211ENST00000567320 ZNF76P36508 570 aa5.82□□□□□ -1.48
CDH1-211ENST00000567320 CDR1P51861 262 aa5.82□□□□□ -1.48
CDH1-211ENST00000567320 NCKAP1LP55160 1127 aa5.82□□□□□ -1.48
CDH1-211ENST00000567320 YBX1P67809 324 aaKnown RBP5.82□□□□□ -1.48
CDH1-211ENST00000567320 USP48Q86UV5 1035 aa5.82□□□□□ -1.48
CDH1-211ENST00000567320 KLHL14Q9P2G3 628 aa5.82□□□□□ -1.48
CDH1-211ENST00000567320 C9IYK1 514 aa5.81□□□□□ -1.48
CDH1-211ENST00000567320 IMPDH2P12268 514 aa5.81□□□□□ -1.48
CDH1-211ENST00000567320 NFIXQ14938 502 aa5.81□□□□□ -1.48
CDH1-211ENST00000567320 SLCO6A1Q86UG4 719 aa5.81□□□□□ -1.48
CDH1-211ENST00000567320 LDHDQ86WU2 507 aa5.81□□□□□ -1.48
CDH1-211ENST00000567320 RGS22Q8NE09 1264 aa5.81□□□□□ -1.48
CDH1-211ENST00000567320 BRF1Q92994 677 aa5.81□□□□□ -1.48
CDH1-211ENST00000567320 KCNC2Q96PR1 638 aa5.81□□□□□ -1.48
CDH1-211ENST00000567320 JMJD8Q96S16 334 aa5.81□□□□□ -1.48
CDH1-211ENST00000567320 FOXD2O60548 495 aaPredicted RBP5.8□□□□□ -1.48
CDH1-211ENST00000567320 HLA-DQA1Q5Y7H0 255 aa5.8□□□□□ -1.48
CDH1-211ENST00000567320 DCAF15Q66K64 600 aa5.8□□□□□ -1.48
CDH1-211ENST00000567320 INTS3Q68E01 1043 aaKnown RBP5.8□□□□□ -1.48
CDH1-211ENST00000567320 ZDHHC14Q8IZN3 488 aa5.8□□□□□ -1.48
CDH1-211ENST00000567320 DACT3Q96B18 629 aaPredicted RBP5.8□□□□□ -1.48
CDH1-211ENST00000567320 PWWP2AQ96N64 755 aa5.8□□□□□ -1.48
CDH1-211ENST00000567320 ACSL6Q9UKU0 697 aa5.8□□□□□ -1.48
CDH1-211ENST00000567320 ZNRF3Q9ULT6 936 aa5.8□□□□□ -1.48
CDH1-211ENST00000567320 A0A0G2JLL6 359 aaPredicted RBP5.79□□□□□ -1.48
CDH1-211ENST00000567320 H0Y8X5 98 aa5.79□□□□□ -1.48
CDH1-211ENST00000567320 BUB1BO60566 1050 aaPredicted RBP5.79□□□□□ -1.48
CDH1-211ENST00000567320 ACRP10323 421 aa5.79□□□□□ -1.48
CDH1-211ENST00000567320 NOP2P46087 812 aaKnown RBP5.79□□□□□ -1.48
CDH1-211ENST00000567320 PMS1P54277 932 aaKnown RBP5.79□□□□□ -1.48
CDH1-211ENST00000567320 ZNF394Q53GI3 561 aa5.79□□□□□ -1.48
CDH1-211ENST00000567320 BICRALQ6AI39 1079 aa5.79□□□□□ -1.48
CDH1-211ENST00000567320 ZC3H14Q6PJT7 736 aaKnown RBP5.79□□□□□ -1.48
CDH1-211ENST00000567320 RPTNQ6XPR3 784 aa5.79□□□□□ -1.48
CDH1-211ENST00000567320 FEZF2Q8TBJ5 459 aa5.79□□□□□ -1.48
CDH1-211ENST00000567320 SLC12A9Q9BXP2 914 aa5.79□□□□□ -1.48
CDH1-211ENST00000567320 PRR13Q9NZ81 148 aa5.79□□□□□ -1.48
CDH1-211ENST00000567320 DBR1Q9UK59 544 aaKnown RBP5.79□□□□□ -1.48
CDH1-211ENST00000567320 PCDHGB7Q9Y5F8 929 aa5.79□□□□□ -1.48
CDH1-211ENST00000567320 ZNF200P98182 395 aaPredicted RBP5.78□□□□□ -1.48
CDH1-211ENST00000567320 RTP2Q5QGT7 225 aa5.78□□□□□ -1.48
CDH1-211ENST00000567320 AXDND1Q5T1B0 1012 aaPredicted RBP5.78□□□□□ -1.48
CDH1-211ENST00000567320 FAM129CQ86XR2 697 aa5.78□□□□□ -1.48
CDH1-211ENST00000567320 IGDCC3Q8IVU1 814 aa5.78□□□□□ -1.48
CDH1-211ENST00000567320 FIBCD1Q8N539 461 aa5.78□□□□□ -1.48
CDH1-211ENST00000567320 SMARCC1Q92922 1105 aaPredicted RBP5.78□□□□□ -1.48
CDH1-211ENST00000567320 ZDHHC15Q96MV8 337 aa5.78□□□□□ -1.48
CDH1-211ENST00000567320 TM9SF2Q99805 663 aa5.78□□□□□ -1.48
CDH1-211ENST00000567320 NOL6Q9H6R4 1146 aaKnown RBP5.78□□□□□ -1.48
CDH1-211ENST00000567320 TNFRSF12AQ9NP84 129 aa5.78□□□□□ -1.48
CDH1-211ENST00000567320 PPT2Q9UMR5 302 aa5.78□□□□□ -1.48
CDH1-211ENST00000567320 SF3B6Q9Y3B4 125 aaKnown RBP5.78□□□□□ -1.48
CDH1-211ENST00000567320 OTOL1A6NHN0 477 aaPredicted RBP5.77□□□□□ -1.49
CDH1-211ENST00000567320 IRS4O14654 1257 aaPredicted RBP5.77□□□□□ -1.49
CDH1-211ENST00000567320 CD3EP07766 207 aa5.77□□□□□ -1.49
CDH1-211ENST00000567320 ZNF16P17020 682 aaPredicted RBP5.77□□□□□ -1.49
CDH1-211ENST00000567320 SYN1P17600 705 aa5.77□□□□□ -1.49
CDH1-211ENST00000567320 PFKLP17858 780 aa5.77□□□□□ -1.49
CDH1-211ENST00000567320 ZNF445P59923 1031 aa5.77□□□□□ -1.49
CDH1-211ENST00000567320 MVKQ03426 396 aa5.77□□□□□ -1.49
CDH1-211ENST00000567320 PPP2R5DQ14738 602 aa5.77□□□□□ -1.49
CDH1-211ENST00000567320 NR1I3Q14994 352 aa5.77□□□□□ -1.49
CDH1-211ENST00000567320 TCEAL1Q15170 157 aa5.77□□□□□ -1.49
CDH1-211ENST00000567320 PLEKHN1Q494U1 663 aaPredicted RBP5.77□□□□□ -1.49
CDH1-211ENST00000567320 ERICH6BQ5W0A0 696 aa5.77□□□□□ -1.49
CDH1-211ENST00000567320 SP8Q8IXZ3 490 aa5.77□□□□□ -1.49
CDH1-211ENST00000567320 TMEFF1Q8IYR6 380 aa5.77□□□□□ -1.49
CDH1-211ENST00000567320 TMEM52Q8NDY8 209 aa5.77□□□□□ -1.49
CDH1-211ENST00000567320 RNF34Q969K3 372 aa5.77□□□□□ -1.49
CDH1-211ENST00000567320 CRBNQ96SW2 442 aa5.77□□□□□ -1.49
CDH1-211ENST00000567320 BACH2Q9BYV9 841 aa5.77□□□□□ -1.49
CDH1-211ENST00000567320 GP6Q9HCN6 339 aa5.77□□□□□ -1.49
CDH1-211ENST00000567320 EPB41L4AQ9HCS5 686 aaPredicted RBP5.77□□□□□ -1.49
CDH1-211ENST00000567320 SHOXO15266 292 aa5.76□□□□□ -1.49
CDH1-211ENST00000567320 TBC1D8O95759 1140 aa5.76□□□□□ -1.49
CDH1-211ENST00000567320 MSL3P1P0C860 447 aa5.76□□□□□ -1.49
CDH1-211ENST00000567320 ITGA4P13612 1032 aa5.76□□□□□ -1.49
CDH1-211ENST00000567320 CD247P20963 164 aa5.76□□□□□ -1.49
CDH1-211ENST00000567320 GUCY2CP25092 1073 aa5.76□□□□□ -1.49
CDH1-211ENST00000567320 TACR1P25103 407 aa5.76□□□□□ -1.49
CDH1-211ENST00000567320 LIMS1P48059 325 aa5.76□□□□□ -1.49
CDH1-211ENST00000567320 MAPKAPK2P49137 400 aa5.76□□□□□ -1.49
CDH1-211ENST00000567320 ZYXQ15942 572 aaKnown RBP5.76□□□□□ -1.49
CDH1-211ENST00000567320 CYP2R1Q6VVX0 501 aa5.76□□□□□ -1.49
CDH1-211ENST00000567320 UNC5AQ6ZN44 842 aa5.76□□□□□ -1.49
CDH1-211ENST00000567320 RUFY4Q6ZNE9 571 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms