RNA–Protein interactions for RNA: ENST00000567023.5

COMMD4-216, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 926 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-216ENST00000567023 FGD4Q96M96 766 aa16.84■□□□□ 0.29
COMMD4-216ENST00000567023 UBE2OQ9C0C9 1292 aaKnown RBP16.84■□□□□ 0.29
COMMD4-216ENST00000567023 PHF24Q9UPV7 400 aa16.84■□□□□ 0.29
COMMD4-216ENST00000567023 ADAMTS4O75173 837 aa16.83■□□□□ 0.28
COMMD4-216ENST00000567023 SLC4A3P48751 1232 aa16.83■□□□□ 0.28
COMMD4-216ENST00000567023 TKFCQ3LXA3 575 aa16.83■□□□□ 0.28
COMMD4-216ENST00000567023 KCTD1Q719H9 257 aa16.83■□□□□ 0.28
COMMD4-216ENST00000567023 DCAF4Q8WV16 495 aa16.83■□□□□ 0.28
COMMD4-216ENST00000567023 TTC14Q96N46 770 aa16.83■□□□□ 0.28
COMMD4-216ENST00000567023 ABHD16BQ9H3Z7 469 aa16.83■□□□□ 0.28
COMMD4-216ENST00000567023 ACAD9Q9H845 621 aa16.83■□□□□ 0.28
COMMD4-216ENST00000567023 FAM184BQ9ULE4 1060 aa16.83■□□□□ 0.28
COMMD4-216ENST00000567023 PRR12Q9ULL5 1215 aa16.83■□□□□ 0.28
COMMD4-216ENST00000567023 PGK1P00558 417 aa16.82■□□□□ 0.28
COMMD4-216ENST00000567023 NT5C2P49902 561 aa16.82■□□□□ 0.28
COMMD4-216ENST00000567023 MDM2Q00987 491 aaPredicted RBP16.82■□□□□ 0.28
COMMD4-216ENST00000567023 IKQ13123 557 aaPredicted RBP16.82■□□□□ 0.28
COMMD4-216ENST00000567023 ACVR2BQ13705 512 aa16.82■□□□□ 0.28
COMMD4-216ENST00000567023 AKNAD1Q5T1N1 836 aa16.82■□□□□ 0.28
COMMD4-216ENST00000567023 BTNL9Q6UXG8 535 aa16.82■□□□□ 0.28
COMMD4-216ENST00000567023 FAM133AQ8N9E0 248 aa16.82■□□□□ 0.28
COMMD4-216ENST00000567023 LRCH3Q96II8 777 aa16.82■□□□□ 0.28
COMMD4-216ENST00000567023 AGBL1Q96MI9 1066 aa16.82■□□□□ 0.28
COMMD4-216ENST00000567023 TMEM47Q9BQJ4 181 aa16.82■□□□□ 0.28
COMMD4-216ENST00000567023 TSEN34Q9BSV6 310 aaKnown RBP16.82■□□□□ 0.28
COMMD4-216ENST00000567023 DUSP11O75319 330 aaKnown RBP16.81■□□□□ 0.28
COMMD4-216ENST00000567023 MYCNP04198 464 aaPredicted RBP16.81■□□□□ 0.28
COMMD4-216ENST00000567023 TOP1P11387 765 aaKnown RBP16.81■□□□□ 0.28
COMMD4-216ENST00000567023 MFSD6Q6ZSS7 791 aa16.81■□□□□ 0.28
COMMD4-216ENST00000567023 KLHDC9Q8NEP7 349 aa16.81■□□□□ 0.28
COMMD4-216ENST00000567023 FERMT2Q96AC1 680 aa16.81■□□□□ 0.28
COMMD4-216ENST00000567023 LBHD1Q9BQE6 289 aaPredicted RBP16.81■□□□□ 0.28
COMMD4-216ENST00000567023 A1CFQ9NQ94 594 aaKnown RBP16.81■□□□□ 0.28
COMMD4-216ENST00000567023 TOMM22Q9NS69 142 aa16.81■□□□□ 0.28
COMMD4-216ENST00000567023 HOMER2Q9NSB8 354 aa16.81■□□□□ 0.28
COMMD4-216ENST00000567023 RNF146Q9NTX7 359 aa16.81■□□□□ 0.28
COMMD4-216ENST00000567023 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.81■□□□□ 0.28
COMMD4-216ENST00000567023 PRKAG2Q9UGJ0 569 aa16.81■□□□□ 0.28
COMMD4-216ENST00000567023 ISY1Q9ULR0 285 aaKnown RBP16.81■□□□□ 0.28
COMMD4-216ENST00000567023 ATP11BQ9Y2G3 1177 aa16.81■□□□□ 0.28
COMMD4-216ENST00000567023 SYNRGQ9UMZ2 1314 aa16.8■□□□□ 0.28
COMMD4-216ENST00000567023 HIP1O00291 1037 aa16.8■□□□□ 0.28
COMMD4-216ENST00000567023 TRIM60Q495X7 471 aa16.8■□□□□ 0.28
COMMD4-216ENST00000567023 RRP12Q5JTH9 1297 aaKnown RBP16.8■□□□□ 0.28
COMMD4-216ENST00000567023 CCSAPQ6IQ19 270 aaPredicted RBP16.8■□□□□ 0.28
COMMD4-216ENST00000567023 ARMCX2Q7L311 632 aa16.8■□□□□ 0.28
COMMD4-216ENST00000567023 RASGRP2Q7LDG7 609 aa16.8■□□□□ 0.28
COMMD4-216ENST00000567023 CCDC144CPQ8IYA2 1237 aa16.8■□□□□ 0.28
COMMD4-216ENST00000567023 TRERF1Q96PN7 1200 aa16.8■□□□□ 0.28
COMMD4-216ENST00000567023 KATNBL1Q9H079 304 aa16.8■□□□□ 0.28
COMMD4-216ENST00000567023 RANBP17Q9H2T7 1088 aaKnown RBP16.8■□□□□ 0.28
COMMD4-216ENST00000567023 RNF41Q9H4P4 317 aaPredicted RBP16.8■□□□□ 0.28
COMMD4-216ENST00000567023 A0A1W2PQ45 241 aaPredicted RBP16.79■□□□□ 0.28
COMMD4-216ENST00000567023 A0A1W2PQY0 241 aa16.79■□□□□ 0.28
COMMD4-216ENST00000567023 MOXD2PA6NHM9 499 aa16.79■□□□□ 0.28
COMMD4-216ENST00000567023 POTEB2H3BUK9 544 aa16.79■□□□□ 0.28
COMMD4-216ENST00000567023 ZNF213O14771 459 aa16.79■□□□□ 0.28
COMMD4-216ENST00000567023 ICAM1P05362 532 aa16.79■□□□□ 0.28
COMMD4-216ENST00000567023 CST5P28325 142 aaPredicted RBP16.79■□□□□ 0.28
COMMD4-216ENST00000567023 HAND2P61296 217 aa16.79■□□□□ 0.28
COMMD4-216ENST00000567023 NKX3-2P78367 333 aa16.79■□□□□ 0.28
COMMD4-216ENST00000567023 CNTN2Q02246 1040 aa16.79■□□□□ 0.28
COMMD4-216ENST00000567023 CCDC144BQ3MJ40 725 aa16.79■□□□□ 0.28
COMMD4-216ENST00000567023 CWC27Q6UX04 472 aaKnown RBP16.79■□□□□ 0.28
COMMD4-216ENST00000567023 TBC1D10CQ8IV04 446 aa16.79■□□□□ 0.28
COMMD4-216ENST00000567023 LENG1Q96BZ8 264 aaPredicted RBP16.79■□□□□ 0.28
COMMD4-216ENST00000567023 CHMP4CQ96CF2 233 aa16.79■□□□□ 0.28
COMMD4-216ENST00000567023 ZHX1Q9UKY1 873 aaPredicted RBP16.79■□□□□ 0.28
COMMD4-216ENST00000567023 SOWAHBA6NEL2 793 aa16.78■□□□□ 0.28
COMMD4-216ENST00000567023 SNHG28P0DPA3 235 aa16.78■□□□□ 0.28
COMMD4-216ENST00000567023 PDHBP11177 359 aa16.78■□□□□ 0.28
COMMD4-216ENST00000567023 ALAS1P13196 640 aa16.78■□□□□ 0.28
COMMD4-216ENST00000567023 ACLYP53396 1101 aa16.78■□□□□ 0.28
COMMD4-216ENST00000567023 TTBK2Q6IQ55 1244 aa16.78■□□□□ 0.28
COMMD4-216ENST00000567023 CCDC174Q6PII3 467 aa16.78■□□□□ 0.28
COMMD4-216ENST00000567023 NUP133Q8WUM0 1156 aa16.78■□□□□ 0.28
COMMD4-216ENST00000567023 ESR2Q92731 530 aa16.78■□□□□ 0.28
COMMD4-216ENST00000567023 UPF3AQ9H1J1 476 aaKnown RBP16.78■□□□□ 0.28
COMMD4-216ENST00000567023 PDLIM7Q9NR12 457 aa16.78■□□□□ 0.28
COMMD4-216ENST00000567023 CYP39A1Q9NYL5 469 aa16.78■□□□□ 0.28
COMMD4-216ENST00000567023 SUPT16HQ9Y5B9 1047 aaKnown RBP16.78■□□□□ 0.28
COMMD4-216ENST00000567023 ASB14A6NK59 587 aa16.77■□□□□ 0.28
COMMD4-216ENST00000567023 ADCY6O43306 1168 aa16.77■□□□□ 0.28
COMMD4-216ENST00000567023 GJA9P57773 515 aa16.77■□□□□ 0.28
COMMD4-216ENST00000567023 SNAP25P60880 206 aa16.77■□□□□ 0.28
COMMD4-216ENST00000567023 TLE2Q04725 743 aa16.77■□□□□ 0.28
COMMD4-216ENST00000567023 KCNA10Q16322 511 aa16.77■□□□□ 0.28
COMMD4-216ENST00000567023 CCDC96Q2M329 555 aa16.77■□□□□ 0.28
COMMD4-216ENST00000567023 MUM1L1Q5H9M0 696 aa16.77■□□□□ 0.28
COMMD4-216ENST00000567023 ANKRD33Q7Z3H0 272 aa16.77■□□□□ 0.28
COMMD4-216ENST00000567023 DGKHQ86XP1 1220 aa16.77■□□□□ 0.28
COMMD4-216ENST00000567023 TOX2Q96NM4 488 aa16.77■□□□□ 0.28
COMMD4-216ENST00000567023 DSCC1Q9BVC3 393 aa16.77■□□□□ 0.28
COMMD4-216ENST00000567023 DIAPH3Q9NSV4 1193 aa16.77■□□□□ 0.28
COMMD4-216ENST00000567023 CCPG1Q9ULG6 757 aa16.77■□□□□ 0.28
COMMD4-216ENST00000567023 LTBP2Q14767 1821 aa16.77■□□□□ 0.27
COMMD4-216ENST00000567023 MCM3APO60318 1980 aa16.77■□□□□ 0.27
COMMD4-216ENST00000567023 ASTN1O14525 1302 aa16.76■□□□□ 0.27
COMMD4-216ENST00000567023 TRIM43BA6NCK2 446 aa16.76■□□□□ 0.27
COMMD4-216ENST00000567023 SLC16A2P36021 539 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms