RNA–Protein interactions for RNA: ENST00000566827.5

CDH11-212, Transcript of cadherin 11, humanhuman

TSL 2 BASIC

Gene CDH11, Length 2,395 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-212ENST00000566827 MGAMO43451 1857 aa12.79□□□□□ -0.36
CDH11-212ENST00000566827 C19orf81C9J6K1 198 aa12.79□□□□□ -0.36
CDH11-212ENST00000566827 FMNL1O95466 1100 aaPredicted RBP12.79□□□□□ -0.36
CDH11-212ENST00000566827 SLC3A2P08195 630 aaKnown RBP12.79□□□□□ -0.36
CDH11-212ENST00000566827 STAG2Q8N3U4 1231 aa12.79□□□□□ -0.36
CDH11-212ENST00000566827 RAD50Q92878 1312 aa12.79□□□□□ -0.36
CDH11-212ENST00000566827 TMEM232C9JQI7 657 aa12.78□□□□□ -0.36
CDH11-212ENST00000566827 ALDH1A1P00352 501 aa12.78□□□□□ -0.36
CDH11-212ENST00000566827 TRIM32Q13049 653 aa12.78□□□□□ -0.36
CDH11-212ENST00000566827 SLFN13Q68D06 897 aa12.78□□□□□ -0.36
CDH11-212ENST00000566827 PURBQ96QR8 312 aaKnown RBP12.78□□□□□ -0.36
CDH11-212ENST00000566827 PTCH2Q9Y6C5 1203 aa12.78□□□□□ -0.36
CDH11-212ENST00000566827 HOXA7P31268 230 aaPredicted RBP12.78□□□□□ -0.36
CDH11-212ENST00000566827 TMEM132BQ14DG7 1078 aa12.78□□□□□ -0.36
CDH11-212ENST00000566827 NBPF11Q86T75 865 aa12.78□□□□□ -0.36
CDH11-212ENST00000566827 ZMYM6O95789 1325 aa12.78□□□□□ -0.36
CDH11-212ENST00000566827 hCG_1642624A0A1W2PR95 340 aa12.77□□□□□ -0.36
CDH11-212ENST00000566827 OSBPP22059 807 aa12.77□□□□□ -0.36
CDH11-212ENST00000566827 IKQ13123 557 aaPredicted RBP12.77□□□□□ -0.36
CDH11-212ENST00000566827 SLC35G1Q2M3R5 365 aa12.77□□□□□ -0.36
CDH11-212ENST00000566827 ESR2Q92731 530 aa12.77□□□□□ -0.36
CDH11-212ENST00000566827 ZSCAN10Q96SZ4 725 aaPredicted RBP12.77□□□□□ -0.36
CDH11-212ENST00000566827 UPF3BQ9BZI7 483 aaKnown RBP12.77□□□□□ -0.36
CDH11-212ENST00000566827 NYAP2Q9P242 653 aa12.77□□□□□ -0.36
CDH11-212ENST00000566827 SLC1A4P43007 532 aa12.77□□□□□ -0.37
CDH11-212ENST00000566827 ERVK-9P63128 1117 aa12.77□□□□□ -0.37
CDH11-212ENST00000566827 ERVK-24P63145 666 aa12.77□□□□□ -0.37
CDH11-212ENST00000566827 CCL14Q16627 93 aa12.77□□□□□ -0.37
CDH11-212ENST00000566827 CCDC96Q2M329 555 aa12.77□□□□□ -0.37
CDH11-212ENST00000566827 GPATCH11Q8N954 259 aa12.77□□□□□ -0.37
CDH11-212ENST00000566827 C12orf42Q96LP6 360 aa12.77□□□□□ -0.37
CDH11-212ENST00000566827 PPP1R12CQ9BZL4 782 aa12.77□□□□□ -0.37
CDH11-212ENST00000566827 RAVER2Q9HCJ3 691 aaKnown RBP12.77□□□□□ -0.37
CDH11-212ENST00000566827 MCM3APO60318 1980 aa12.76□□□□□ -0.37
CDH11-212ENST00000566827 USP17L15C9J2P7 530 aa12.76□□□□□ -0.37
CDH11-212ENST00000566827 USP17L13C9JLJ4 530 aa12.76□□□□□ -0.37
CDH11-212ENST00000566827 USP17L11C9JVI0 530 aa12.76□□□□□ -0.37
CDH11-212ENST00000566827 USP17L18D6R9N7 530 aa12.76□□□□□ -0.37
CDH11-212ENST00000566827 USP17L22D6RA61 530 aa12.76□□□□□ -0.37
CDH11-212ENST00000566827 USP17L17D6RBQ6 530 aa12.76□□□□□ -0.37
CDH11-212ENST00000566827 USP17L19D6RCP7 530 aa12.76□□□□□ -0.37
CDH11-212ENST00000566827 USP17L20D6RJB6 530 aa12.76□□□□□ -0.37
CDH11-212ENST00000566827 USP17L24Q0WX57 530 aa12.76□□□□□ -0.37
CDH11-212ENST00000566827 CCDC174Q6PII3 467 aa12.76□□□□□ -0.37
CDH11-212ENST00000566827 MB21D2Q8IYB1 491 aaPredicted RBP12.76□□□□□ -0.37
CDH11-212ENST00000566827 VAT1LQ9HCJ6 419 aa12.76□□□□□ -0.37
CDH11-212ENST00000566827 PLIN4Q96Q06 1357 aa12.76□□□□□ -0.37
CDH11-212ENST00000566827 PLXNB2O15031 1838 aa12.76□□□□□ -0.37
CDH11-212ENST00000566827 PGK2P07205 417 aa12.76□□□□□ -0.37
CDH11-212ENST00000566827 PDHBP11177 359 aa12.76□□□□□ -0.37
CDH11-212ENST00000566827 PTGS1P23219 599 aa12.76□□□□□ -0.37
CDH11-212ENST00000566827 FLT3LGP49771 235 aa12.76□□□□□ -0.37
CDH11-212ENST00000566827 COG2Q14746 738 aa12.76□□□□□ -0.37
CDH11-212ENST00000566827 SEC23AQ15436 765 aa12.76□□□□□ -0.37
CDH11-212ENST00000566827 PNMA1Q8ND90 353 aa12.76□□□□□ -0.37
CDH11-212ENST00000566827 AGBL1Q96MI9 1066 aa12.76□□□□□ -0.37
CDH11-212ENST00000566827 CTNNA3Q9UI47 895 aa12.76□□□□□ -0.37
CDH11-212ENST00000566827 VWA5AO00534 786 aa12.75□□□□□ -0.37
CDH11-212ENST00000566827 ERCC3P19447 782 aa12.75□□□□□ -0.37
CDH11-212ENST00000566827 CYP2B6P20813 491 aa12.75□□□□□ -0.37
CDH11-212ENST00000566827 PTMSP20962 102 aa12.75□□□□□ -0.37
CDH11-212ENST00000566827 USP14P54578 494 aa12.75□□□□□ -0.37
CDH11-212ENST00000566827 C8orf34Q49A92 452 aa12.75□□□□□ -0.37
CDH11-212ENST00000566827 CFHR5Q9BXR6 569 aa12.75□□□□□ -0.37
CDH11-212ENST00000566827 MOV10L1Q9BXT6 1211 aaKnown RBP12.75□□□□□ -0.37
CDH11-212ENST00000566827 ZNF287Q9HBT7 754 aa12.75□□□□□ -0.37
CDH11-212ENST00000566827 SNX14Q9Y5W7 946 aa12.75□□□□□ -0.37
CDH11-212ENST00000566827 PRUNE2Q8WUY3 3088 aa12.75□□□□□ -0.37
CDH11-212ENST00000566827 ZNFX1Q9P2E3 1918 aaKnown RBP12.75□□□□□ -0.37
CDH11-212ENST00000566827 CCDC85CA6NKD9 419 aa12.74□□□□□ -0.37
CDH11-212ENST00000566827 TNPO2O14787 897 aaKnown RBP12.74□□□□□ -0.37
CDH11-212ENST00000566827 IFIT3O14879 490 aaKnown RBP12.74□□□□□ -0.37
CDH11-212ENST00000566827 SOX10P56693 466 aa12.74□□□□□ -0.37
CDH11-212ENST00000566827 MTFR1Q15390 333 aa12.74□□□□□ -0.37
CDH11-212ENST00000566827 BANK1Q8NDB2 785 aa12.74□□□□□ -0.37
CDH11-212ENST00000566827 MKL1Q969V6 931 aa12.74□□□□□ -0.37
CDH11-212ENST00000566827 UBAC1Q9BSL1 405 aa12.74□□□□□ -0.37
CDH11-212ENST00000566827 ZNF214Q9UL59 606 aaPredicted RBP12.74□□□□□ -0.37
CDH11-212ENST00000566827 PRC1O43663 620 aa12.74□□□□□ -0.37
CDH11-212ENST00000566827 BMP3P12645 472 aa12.74□□□□□ -0.37
CDH11-212ENST00000566827 DSG3P32926 999 aa12.74□□□□□ -0.37
CDH11-212ENST00000566827 FAM110CQ1W6H9 321 aa12.74□□□□□ -0.37
CDH11-212ENST00000566827 LBX2Q6XYB7 198 aa12.74□□□□□ -0.37
CDH11-212ENST00000566827 RALYLQ86SE5 291 aaKnown RBP12.74□□□□□ -0.37
CDH11-212ENST00000566827 NCAPG2Q86XI2 1143 aa12.74□□□□□ -0.37
CDH11-212ENST00000566827 NPAS4Q8IUM7 802 aa12.74□□□□□ -0.37
CDH11-212ENST00000566827 REM2Q8IYK8 340 aaPredicted RBP12.74□□□□□ -0.37
CDH11-212ENST00000566827 IGDCC4Q8TDY8 1250 aa12.74□□□□□ -0.37
CDH11-212ENST00000566827 MYH6P13533 1939 aa12.74□□□□□ -0.37
CDH11-212ENST00000566827 WDR46O15213 610 aaKnown RBP12.73□□□□□ -0.37
CDH11-212ENST00000566827 CTU1Q7Z7A3 348 aaKnown RBP12.73□□□□□ -0.37
CDH11-212ENST00000566827 GPRC5AQ8NFJ5 357 aa12.73□□□□□ -0.37
CDH11-212ENST00000566827 NUP133Q8WUM0 1156 aa12.73□□□□□ -0.37
CDH11-212ENST00000566827 ABHD8Q96I13 439 aa12.73□□□□□ -0.37
CDH11-212ENST00000566827 JAKMIP1Q96N16 626 aaKnown RBP12.73□□□□□ -0.37
CDH11-212ENST00000566827 USP26Q9BXU7 913 aa12.73□□□□□ -0.37
CDH11-212ENST00000566827 RNF41Q9H4P4 317 aaPredicted RBP12.73□□□□□ -0.37
CDH11-212ENST00000566827 FLRT1Q9NZU1 646 aa12.73□□□□□ -0.37
CDH11-212ENST00000566827 PPP1R9AQ9ULJ8 1098 aa12.73□□□□□ -0.37
CDH11-212ENST00000566827 HPS5Q9UPZ3 1129 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms