RNA–Protein interactions for RNA: ENST00000566818.1

IFT140-208, Transcript of intraflagellar transport 140, humanhuman

TSL 3

Gene IFT140, Length 722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-208ENST00000566818 CCDC178Q5BJE1 867 aa22.09■■□□□ 1.13
IFT140-208ENST00000566818 GJC2Q5T442 439 aaPredicted RBP22.09■■□□□ 1.13
IFT140-208ENST00000566818 TTC14Q96N46 770 aa22.09■■□□□ 1.13
IFT140-208ENST00000566818 RNF146Q9NTX7 359 aa22.09■■□□□ 1.13
IFT140-208ENST00000566818 RBM27Q9P2N5 1060 aaKnown RBP22.09■■□□□ 1.13
IFT140-208ENST00000566818 A0A1W2PPC1 479 aa22.08■■□□□ 1.13
IFT140-208ENST00000566818 MYCNP04198 464 aaPredicted RBP22.08■■□□□ 1.13
IFT140-208ENST00000566818 GSPT1P15170 499 aaKnown RBP22.08■■□□□ 1.13
IFT140-208ENST00000566818 LRRC26Q2I0M4 334 aa22.08■■□□□ 1.13
IFT140-208ENST00000566818 CCDC174Q6PII3 467 aa22.08■■□□□ 1.13
IFT140-208ENST00000566818 RASGRP2Q7LDG7 609 aa22.08■■□□□ 1.13
IFT140-208ENST00000566818 AGBL1Q96MI9 1066 aa22.08■■□□□ 1.13
IFT140-208ENST00000566818 XPNPEP3Q9NQH7 507 aa22.08■■□□□ 1.13
IFT140-208ENST00000566818 ZNF536O15090 1300 aa22.07■■□□□ 1.12
IFT140-208ENST00000566818 ALAS1P13196 640 aa22.07■■□□□ 1.12
IFT140-208ENST00000566818 FXR1P51114 621 aaKnown RBP eCLIP22.07■■□□□ 1.12
IFT140-208ENST00000566818 MAMDC4Q6UXC1 1216 aa22.07■■□□□ 1.12
IFT140-208ENST00000566818 IQCA1Q86XH1 822 aa22.07■■□□□ 1.12
IFT140-208ENST00000566818 RUFY2Q8WXA3 655 aa22.07■■□□□ 1.12
IFT140-208ENST00000566818 PRO3102Q9H379 93 aa22.07■■□□□ 1.12
IFT140-208ENST00000566818 ZHX1Q9UKY1 873 aaPredicted RBP22.07■■□□□ 1.12
IFT140-208ENST00000566818 CCPG1Q9ULG6 757 aa22.07■■□□□ 1.12
IFT140-208ENST00000566818 POTEB2H3BUK9 544 aa22.06■■□□□ 1.12
IFT140-208ENST00000566818 ZNF865P0CJ78 1059 aaPredicted RBP22.06■■□□□ 1.12
IFT140-208ENST00000566818 LRRC41Q15345 812 aa22.06■■□□□ 1.12
IFT140-208ENST00000566818 SYDE2Q5VT97 1194 aa22.06■■□□□ 1.12
IFT140-208ENST00000566818 BTNL9Q6UXG8 535 aa22.06■■□□□ 1.12
IFT140-208ENST00000566818 RNF180Q86T96 592 aa22.06■■□□□ 1.12
IFT140-208ENST00000566818 TRERF1Q96PN7 1200 aa22.06■■□□□ 1.12
IFT140-208ENST00000566818 TRIOBPQ9H2D6 2365 aa22.06■■□□□ 1.12
IFT140-208ENST00000566818 FRMPD2Q68DX3 1309 aaPredicted RBP22.06■■□□□ 1.12
IFT140-208ENST00000566818 PDHBP11177 359 aa22.05■■□□□ 1.12
IFT140-208ENST00000566818 TAL1P17542 331 aaPredicted RBP22.05■■□□□ 1.12
IFT140-208ENST00000566818 SYN1P17600 705 aa22.05■■□□□ 1.12
IFT140-208ENST00000566818 DGKHQ86XP1 1220 aa22.05■■□□□ 1.12
IFT140-208ENST00000566818 RANBP17Q9H2T7 1088 aaKnown RBP22.05■■□□□ 1.12
IFT140-208ENST00000566818 CNNM2Q9H8M5 875 aa22.05■■□□□ 1.12
IFT140-208ENST00000566818 GPCPD1Q9NPB8 672 aa22.05■■□□□ 1.12
IFT140-208ENST00000566818 A1CFQ9NQ94 594 aaKnown RBP22.05■■□□□ 1.12
IFT140-208ENST00000566818 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.05■■□□□ 1.12
IFT140-208ENST00000566818 PNMA2Q9UL42 364 aa22.05■■□□□ 1.12
IFT140-208ENST00000566818 FAM184BQ9ULE4 1060 aa22.05■■□□□ 1.12
IFT140-208ENST00000566818 KDM4AO75164 1064 aa22.04■■□□□ 1.12
IFT140-208ENST00000566818 ICAM1P05362 532 aa22.04■■□□□ 1.12
IFT140-208ENST00000566818 ATN1P54259 1190 aaPredicted RBP22.04■■□□□ 1.12
IFT140-208ENST00000566818 SNAP25P60880 206 aa22.04■■□□□ 1.12
IFT140-208ENST00000566818 KRT23Q9C075 422 aa22.04■■□□□ 1.12
IFT140-208ENST00000566818 SNAI1O95863 264 aaPredicted RBP22.03■■□□□ 1.12
IFT140-208ENST00000566818 SLC16A2P36021 539 aa22.03■■□□□ 1.12
IFT140-208ENST00000566818 RTP1P59025 263 aa22.03■■□□□ 1.12
IFT140-208ENST00000566818 ZNF543Q08ER8 600 aa22.03■■□□□ 1.12
IFT140-208ENST00000566818 GPATCH4Q5T3I0 446 aaKnown RBP22.03■■□□□ 1.12
IFT140-208ENST00000566818 TTBK2Q6IQ55 1244 aa22.03■■□□□ 1.12
IFT140-208ENST00000566818 ARMCX2Q7L311 632 aa22.03■■□□□ 1.12
IFT140-208ENST00000566818 GDF15Q99988 308 aa22.03■■□□□ 1.12
IFT140-208ENST00000566818 ZKSCAN3Q9BRR0 538 aa22.03■■□□□ 1.12
IFT140-208ENST00000566818 ABHD16BQ9H3Z7 469 aa22.03■■□□□ 1.12
IFT140-208ENST00000566818 KAT14Q9H8E8 782 aa22.03■■□□□ 1.12
IFT140-208ENST00000566818 B4E1Z4 1266 aa22.02■■□□□ 1.12
IFT140-208ENST00000566818 SNHG28P0DPA3 235 aa22.02■■□□□ 1.12
IFT140-208ENST00000566818 ACVR2BQ13705 512 aa22.02■■□□□ 1.12
IFT140-208ENST00000566818 FAM133AQ8N9E0 248 aa22.02■■□□□ 1.12
IFT140-208ENST00000566818 FGD4Q96M96 766 aa22.02■■□□□ 1.12
IFT140-208ENST00000566818 PRKAG2Q9UGJ0 569 aa22.02■■□□□ 1.12
IFT140-208ENST00000566818 ASB14A6NK59 587 aa22.01■■□□□ 1.11
IFT140-208ENST00000566818 PGK1P00558 417 aa22.01■■□□□ 1.11
IFT140-208ENST00000566818 BMP8BP34820 402 aa22.01■■□□□ 1.11
IFT140-208ENST00000566818 ADCYAP1R1P41586 468 aa22.01■■□□□ 1.11
IFT140-208ENST00000566818 MAGEA10P43363 369 aaPredicted RBP22.01■■□□□ 1.11
IFT140-208ENST00000566818 CNTN2Q02246 1040 aa22.01■■□□□ 1.11
IFT140-208ENST00000566818 NSMFQ6X4W1 530 aa22.01■■□□□ 1.11
IFT140-208ENST00000566818 CCDC144CPQ8IYA2 1237 aa22.01■■□□□ 1.11
IFT140-208ENST00000566818 PNMA1Q8ND90 353 aa22.01■■□□□ 1.11
IFT140-208ENST00000566818 ZSCAN10Q96SZ4 725 aaPredicted RBP22.01■■□□□ 1.11
IFT140-208ENST00000566818 UBAC1Q9BSL1 405 aa22.01■■□□□ 1.11
IFT140-208ENST00000566818 PHF24Q9UPV7 400 aa22.01■■□□□ 1.11
IFT140-208ENST00000566818 ATP11BQ9Y2G3 1177 aa22.01■■□□□ 1.11
IFT140-208ENST00000566818 CHMLP26374 656 aa22■■□□□ 1.11
IFT140-208ENST00000566818 MUM1L1Q5H9M0 696 aa22■■□□□ 1.11
IFT140-208ENST00000566818 SLC39A5Q6ZMH5 540 aa22■■□□□ 1.11
IFT140-208ENST00000566818 LENG1Q96BZ8 264 aaPredicted RBP22■■□□□ 1.11
IFT140-208ENST00000566818 IL25Q9H293 177 aa22■■□□□ 1.11
IFT140-208ENST00000566818 SPC25Q9HBM1 224 aa22■■□□□ 1.11
IFT140-208ENST00000566818 CYP39A1Q9NYL5 469 aa22■■□□□ 1.11
IFT140-208ENST00000566818 TNKSO95271 1327 aa22■■□□□ 1.11
IFT140-208ENST00000566818 SYNRGQ9UMZ2 1314 aa22■■□□□ 1.11
IFT140-208ENST00000566818 ADAMTS4O75173 837 aa21.99■■□□□ 1.11
IFT140-208ENST00000566818 DUSP11O75319 330 aaKnown RBP21.99■■□□□ 1.11
IFT140-208ENST00000566818 FERMT2Q96AC1 680 aa21.99■■□□□ 1.11
IFT140-208ENST00000566818 TSEN34Q9BSV6 310 aaKnown RBP21.99■■□□□ 1.11
IFT140-208ENST00000566818 WDR19Q8NEZ3 1342 aa21.99■■□□□ 1.11
IFT140-208ENST00000566818 SMCHD1A6NHR9 2005 aa21.99■■□□□ 1.11
IFT140-208ENST00000566818 MCM3APO60318 1980 aa21.98■■□□□ 1.11
IFT140-208ENST00000566818 TRDNQ13061 729 aa21.98■■□□□ 1.11
IFT140-208ENST00000566818 SNX17Q15036 470 aa21.98■■□□□ 1.11
IFT140-208ENST00000566818 CCDC144BQ3MJ40 725 aa21.98■■□□□ 1.11
IFT140-208ENST00000566818 C1orf53Q5VUE5 145 aa21.98■■□□□ 1.11
IFT140-208ENST00000566818 ENAHQ8N8S7 591 aaPredicted RBP21.98■■□□□ 1.11
IFT140-208ENST00000566818 ANKS1AQ92625 1134 aa21.98■■□□□ 1.11
IFT140-208ENST00000566818 LBHD1Q9BQE6 289 aaPredicted RBP21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms