RNA–Protein interactions for RNA: ENST00000566230.5

COMMD4-214, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-214ENST00000566230 ZBED4O75132 1171 aa16.01■□□□□ 0.15
COMMD4-214ENST00000566230 ACRP10323 421 aa16.01■□□□□ 0.15
COMMD4-214ENST00000566230 GNASQ5JWF2 1037 aa16.01■□□□□ 0.15
COMMD4-214ENST00000566230 ZNF365Q70YC5 407 aa16.01■□□□□ 0.15
COMMD4-214ENST00000566230 FAM126BQ8IXS8 530 aa16.01■□□□□ 0.15
COMMD4-214ENST00000566230 PCSK9Q8NBP7 692 aaKnown RBP16.01■□□□□ 0.15
COMMD4-214ENST00000566230 VTI1AQ96AJ9 217 aa16.01■□□□□ 0.15
COMMD4-214ENST00000566230 KATNBL1Q9H079 304 aa16.01■□□□□ 0.15
COMMD4-214ENST00000566230 ABHD16BQ9H3Z7 469 aa16.01■□□□□ 0.15
COMMD4-214ENST00000566230 PRDM12Q9H4Q4 367 aa16.01■□□□□ 0.15
COMMD4-214ENST00000566230 SLC38A10Q9HBR0 1119 aa16.01■□□□□ 0.15
COMMD4-214ENST00000566230 CLIP2Q9UDT6 1046 aa16.01■□□□□ 0.15
COMMD4-214ENST00000566230 A0A0U1RQG5 324 aaPredicted RBP16■□□□□ 0.15
COMMD4-214ENST00000566230 TNFRSF10AO00220 468 aa16■□□□□ 0.15
COMMD4-214ENST00000566230 NKX3-2P78367 333 aa16■□□□□ 0.15
COMMD4-214ENST00000566230 AAMPQ13685 434 aa16■□□□□ 0.15
COMMD4-214ENST00000566230 ZSCAN25Q6NSZ9 544 aa16■□□□□ 0.15
COMMD4-214ENST00000566230 CCDC129Q6ZRS4 1044 aa16■□□□□ 0.15
COMMD4-214ENST00000566230 ARMCX2Q7L311 632 aa16■□□□□ 0.15
COMMD4-214ENST00000566230 PPM1EQ8WY54 764 aa16■□□□□ 0.15
COMMD4-214ENST00000566230 KIFC2Q96AC6 838 aa16■□□□□ 0.15
COMMD4-214ENST00000566230 PPP1R12CQ9BZL4 782 aa16■□□□□ 0.15
COMMD4-214ENST00000566230 MKNK2Q9HBH9 465 aa16■□□□□ 0.15
COMMD4-214ENST00000566230 REV3LO60673 3130 aa15.99■□□□□ 0.15
COMMD4-214ENST00000566230 MINDY4BA8MYZ0 360 aa15.99■□□□□ 0.15
COMMD4-214ENST00000566230 CD4P01730 458 aa15.99■□□□□ 0.15
COMMD4-214ENST00000566230 CYP2C18P33260 490 aa15.99■□□□□ 0.15
COMMD4-214ENST00000566230 CNTN2Q02246 1040 aa15.99■□□□□ 0.15
COMMD4-214ENST00000566230 ADGRE1Q14246 886 aa15.99■□□□□ 0.15
COMMD4-214ENST00000566230 AKNAD1Q5T1N1 836 aa15.99■□□□□ 0.15
COMMD4-214ENST00000566230 CCDC144CPQ8IYA2 1237 aa15.99■□□□□ 0.15
COMMD4-214ENST00000566230 ANKRD35Q8N283 1001 aa15.99■□□□□ 0.15
COMMD4-214ENST00000566230 TMEM199Q8N511 208 aa15.99■□□□□ 0.15
COMMD4-214ENST00000566230 MKL1Q969V6 931 aa15.99■□□□□ 0.15
COMMD4-214ENST00000566230 GAS2L1Q99501 681 aaPredicted RBP15.99■□□□□ 0.15
COMMD4-214ENST00000566230 SPC25Q9HBM1 224 aa15.99■□□□□ 0.15
COMMD4-214ENST00000566230 TRANK1O15050 2925 aa15.98■□□□□ 0.15
COMMD4-214ENST00000566230 ASTN1O14525 1302 aa15.98■□□□□ 0.15
COMMD4-214ENST00000566230 SMARCA5O60264 1052 aaPredicted RBP15.98■□□□□ 0.15
COMMD4-214ENST00000566230 BEX3Q00994 111 aa15.98■□□□□ 0.15
COMMD4-214ENST00000566230 GIMAP6Q6P9H5 292 aa15.98■□□□□ 0.15
COMMD4-214ENST00000566230 CCDC174Q6PII3 467 aa15.98■□□□□ 0.15
COMMD4-214ENST00000566230 SLC43A3Q8NBI5 491 aa15.98■□□□□ 0.15
COMMD4-214ENST00000566230 CHST13Q8NET6 341 aa15.98■□□□□ 0.15
COMMD4-214ENST00000566230 OSBP2Q969R2 916 aa15.98■□□□□ 0.15
COMMD4-214ENST00000566230 IL23AQ9NPF7 189 aa15.98■□□□□ 0.15
COMMD4-214ENST00000566230 CXXC1Q9P0U4 656 aaPredicted RBP15.98■□□□□ 0.15
COMMD4-214ENST00000566230 FBXO40Q9UH90 709 aa15.98■□□□□ 0.15
COMMD4-214ENST00000566230 FEM1BQ9UK73 627 aa15.98■□□□□ 0.15
COMMD4-214ENST00000566230 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.97■□□□□ 0.15
COMMD4-214ENST00000566230 TLR3O15455 904 aaKnown RBP15.97■□□□□ 0.15
COMMD4-214ENST00000566230 COL9A1P20849 921 aa15.97■□□□□ 0.15
COMMD4-214ENST00000566230 PSRC1Q6PGN9 363 aaPredicted RBP15.97■□□□□ 0.15
COMMD4-214ENST00000566230 FAM133AQ8N9E0 248 aa15.97■□□□□ 0.15
COMMD4-214ENST00000566230 ATXN2LQ8WWM7 1075 aaKnown RBP15.97■□□□□ 0.15
COMMD4-214ENST00000566230 HERVK_113Q902F9 699 aa15.97■□□□□ 0.15
COMMD4-214ENST00000566230 CEP95Q96GE4 821 aa15.97■□□□□ 0.15
COMMD4-214ENST00000566230 EPB41L4AQ9HCS5 686 aaPredicted RBP15.97■□□□□ 0.15
COMMD4-214ENST00000566230 MTMR4Q9NYA4 1195 aa15.97■□□□□ 0.15
COMMD4-214ENST00000566230 CTDP1Q9Y5B0 961 aaPredicted RBP15.97■□□□□ 0.15
COMMD4-214ENST00000566230 TCF20Q9UGU0 1960 aaKnown RBP15.96■□□□□ 0.15
COMMD4-214ENST00000566230 GRIN2DO15399 1336 aa15.96■□□□□ 0.15
COMMD4-214ENST00000566230 UMODL1Q5DID0 1318 aa15.96■□□□□ 0.15
COMMD4-214ENST00000566230 SOWAHBA6NEL2 793 aa15.96■□□□□ 0.15
COMMD4-214ENST00000566230 PRDM1O75626 825 aa15.96■□□□□ 0.15
COMMD4-214ENST00000566230 PTGS1P23219 599 aa15.96■□□□□ 0.15
COMMD4-214ENST00000566230 OAZ1P54368 228 aa15.96■□□□□ 0.15
COMMD4-214ENST00000566230 CCDC85BQ15834 202 aaPredicted RBP15.96■□□□□ 0.15
COMMD4-214ENST00000566230 CXCL17Q6UXB2 119 aa15.96■□□□□ 0.15
COMMD4-214ENST00000566230 LRRC47Q8N1G4 583 aaKnown RBP15.96■□□□□ 0.15
COMMD4-214ENST00000566230 GMCL1P1Q8NEA9 526 aa15.96■□□□□ 0.15
COMMD4-214ENST00000566230 ASB2Q96Q27 587 aa15.96■□□□□ 0.15
COMMD4-214ENST00000566230 NKX2-4Q9H2Z4 354 aa15.96■□□□□ 0.15
COMMD4-214ENST00000566230 HOMER2Q9NSB8 354 aa15.96■□□□□ 0.15
COMMD4-214ENST00000566230 THEGQ9P2T0 379 aa15.96■□□□□ 0.15
COMMD4-214ENST00000566230 GNEQ9Y223 722 aaKnown RBP15.96■□□□□ 0.15
COMMD4-214ENST00000566230 YBX2Q9Y2T7 364 aaKnown RBP15.96■□□□□ 0.15
COMMD4-214ENST00000566230 SUPT16HQ9Y5B9 1047 aaKnown RBP15.96■□□□□ 0.15
COMMD4-214ENST00000566230 DDX49Q9Y6V7 483 aaKnown RBP15.96■□□□□ 0.15
COMMD4-214ENST00000566230 LRRC37A2A6NM11 1700 aa15.96■□□□□ 0.15
COMMD4-214ENST00000566230 FGBP02675 491 aa15.95■□□□□ 0.14
COMMD4-214ENST00000566230 TNFAIP2Q03169 654 aa15.95■□□□□ 0.14
COMMD4-214ENST00000566230 RAB30Q15771 203 aa15.95■□□□□ 0.14
COMMD4-214ENST00000566230 ZNF444Q8N0Y2 327 aaPredicted RBP15.95■□□□□ 0.14
COMMD4-214ENST00000566230 KBTBD3Q8NAB2 608 aa15.95■□□□□ 0.14
COMMD4-214ENST00000566230 LRRCC1Q9C099 1032 aa15.95■□□□□ 0.14
COMMD4-214ENST00000566230 RAPGEFL1Q9UHV5 662 aa15.95■□□□□ 0.14
COMMD4-214ENST00000566230 MSRAQ9UJ68 235 aa15.95■□□□□ 0.14
COMMD4-214ENST00000566230 SYNPO2Q9UMS6 1093 aa15.95■□□□□ 0.14
COMMD4-214ENST00000566230 LCTP09848 1927 aa15.95■□□□□ 0.14
COMMD4-214ENST00000566230 ZNF536O15090 1300 aa15.94■□□□□ 0.14
COMMD4-214ENST00000566230 TTLL1O95922 423 aa15.94■□□□□ 0.14
COMMD4-214ENST00000566230 BMP3P12645 472 aa15.94■□□□□ 0.14
COMMD4-214ENST00000566230 SLFN13Q68D06 897 aa15.94■□□□□ 0.14
COMMD4-214ENST00000566230 APPBP2Q92624 585 aa15.94■□□□□ 0.14
COMMD4-214ENST00000566230 VWCEQ96DN2 955 aa15.94■□□□□ 0.14
COMMD4-214ENST00000566230 AGBL1Q96MI9 1066 aa15.94■□□□□ 0.14
COMMD4-214ENST00000566230 CRBNQ96SW2 442 aa15.94■□□□□ 0.14
COMMD4-214ENST00000566230 HIPK3Q9H422 1215 aa15.94■□□□□ 0.14
COMMD4-214ENST00000566230 DCTPP1Q9H773 170 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms