RNA–Protein interactions for RNA: ENST00000566095.6

SF3B3-207, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-207ENST00000566095 LETM1O95202 739 aaPredicted RBP11.27□□□□□ -0.61
SF3B3-207ENST00000566095 ITGBL1O95965 494 aaPredicted RBP11.27□□□□□ -0.61
SF3B3-207ENST00000566095 BMP15O95972 392 aa11.27□□□□□ -0.61
SF3B3-207ENST00000566095 U2AF2P26368 475 aaKnown RBP eCLIP11.27□□□□□ -0.61
SF3B3-207ENST00000566095 ADCY7P51828 1080 aa11.27□□□□□ -0.61
SF3B3-207ENST00000566095 HUNKP57058 714 aa11.27□□□□□ -0.61
SF3B3-207ENST00000566095 COG2Q14746 738 aa11.27□□□□□ -0.61
SF3B3-207ENST00000566095 TKFCQ3LXA3 575 aa11.27□□□□□ -0.61
SF3B3-207ENST00000566095 OTUD7BQ6GQQ9 843 aa11.27□□□□□ -0.61
SF3B3-207ENST00000566095 GADL1Q6ZQY3 521 aa11.27□□□□□ -0.61
SF3B3-207ENST00000566095 MCF2L2Q86YR7 1114 aa11.27□□□□□ -0.61
SF3B3-207ENST00000566095 CMTR1Q8N1G2 835 aaKnown RBP11.27□□□□□ -0.61
SF3B3-207ENST00000566095 DAGLBQ8NCG7 672 aa11.27□□□□□ -0.61
SF3B3-207ENST00000566095 CCDC102AQ96A19 550 aa11.27□□□□□ -0.61
SF3B3-207ENST00000566095 MTMR8Q96EF0 704 aa11.27□□□□□ -0.61
SF3B3-207ENST00000566095 HHIPL1Q96JK4 782 aa11.27□□□□□ -0.61
SF3B3-207ENST00000566095 PIGSQ96S52 555 aa11.27□□□□□ -0.61
SF3B3-207ENST00000566095 NAP1L4Q99733 375 aaKnown RBP11.27□□□□□ -0.61
SF3B3-207ENST00000566095 PHF20Q9BVI0 1012 aa11.27□□□□□ -0.61
SF3B3-207ENST00000566095 EMILIN3Q9NT22 766 aa11.27□□□□□ -0.61
SF3B3-207ENST00000566095 PPP1R9AQ9ULJ8 1098 aa11.27□□□□□ -0.61
SF3B3-207ENST00000566095 PRR12Q9ULL5 1215 aa11.27□□□□□ -0.61
SF3B3-207ENST00000566095 CEP131Q9UPN4 1083 aa11.27□□□□□ -0.61
SF3B3-207ENST00000566095 AGTPBP1Q9UPW5 1226 aa11.27□□□□□ -0.61
SF3B3-207ENST00000566095 MRPL11Q9Y3B7 192 aaKnown RBP11.27□□□□□ -0.61
SF3B3-207ENST00000566095 ABCB11O95342 1321 aa11.27□□□□□ -0.61
SF3B3-207ENST00000566095 OTOFQ9HC10 1997 aa11.27□□□□□ -0.61
SF3B3-207ENST00000566095 KIF3CO14782 793 aa11.26□□□□□ -0.61
SF3B3-207ENST00000566095 IRF6O14896 467 aa11.26□□□□□ -0.61
SF3B3-207ENST00000566095 CYTH3O43739 400 aa11.26□□□□□ -0.61
SF3B3-207ENST00000566095 HOXA7P31268 230 aaPredicted RBP11.26□□□□□ -0.61
SF3B3-207ENST00000566095 SLC16A2P36021 539 aa11.26□□□□□ -0.61
SF3B3-207ENST00000566095 INHBEP58166 350 aa11.26□□□□□ -0.61
SF3B3-207ENST00000566095 RESTQ13127 1097 aa11.26□□□□□ -0.61
SF3B3-207ENST00000566095 PKN1Q16512 942 aa11.26□□□□□ -0.61
SF3B3-207ENST00000566095 QRICH1Q2TAL8 776 aa11.26□□□□□ -0.61
SF3B3-207ENST00000566095 RILPL1Q5EBL4 403 aa11.26□□□□□ -0.61
SF3B3-207ENST00000566095 TTBK2Q6IQ55 1244 aa11.26□□□□□ -0.61
SF3B3-207ENST00000566095 CATSPERGQ6ZRH7 1159 aa11.26□□□□□ -0.61
SF3B3-207ENST00000566095 DIS3L2Q8IYB7 885 aaKnown RBP11.26□□□□□ -0.61
SF3B3-207ENST00000566095 REM2Q8IYK8 340 aaPredicted RBP11.26□□□□□ -0.61
SF3B3-207ENST00000566095 PIBF1Q8WXW3 757 aa11.26□□□□□ -0.61
SF3B3-207ENST00000566095 WNK4Q96J92 1243 aa11.26□□□□□ -0.61
SF3B3-207ENST00000566095 NUP88Q99567 741 aaPredicted RBP11.26□□□□□ -0.61
SF3B3-207ENST00000566095 RANBP17Q9H2T7 1088 aaKnown RBP11.26□□□□□ -0.61
SF3B3-207ENST00000566095 ZCCHC17Q9NP64 241 aaKnown RBP11.26□□□□□ -0.61
SF3B3-207ENST00000566095 POLR3EQ9NVU0 708 aa11.26□□□□□ -0.61
SF3B3-207ENST00000566095 MAP3K20Q9NYL2 800 aaKnown RBP11.26□□□□□ -0.61
SF3B3-207ENST00000566095 VPS54Q9P1Q0 977 aa11.26□□□□□ -0.61
SF3B3-207ENST00000566095 PCDHA4Q9UN74 947 aa11.26□□□□□ -0.61
SF3B3-207ENST00000566095 PCDHA1Q9Y5I3 950 aa11.26□□□□□ -0.61
SF3B3-207ENST00000566095 PASKQ96RG2 1323 aa11.26□□□□□ -0.61
SF3B3-207ENST00000566095 CCDC194A0A1B0GVG4 234 aa11.25□□□□□ -0.61
SF3B3-207ENST00000566095 SMCO2A6NFE2 343 aa11.25□□□□□ -0.61
SF3B3-207ENST00000566095 MANSC4A6NHS7 340 aaPredicted RBP11.25□□□□□ -0.61
SF3B3-207ENST00000566095 TMEM88BA6NKF7 163 aa11.25□□□□□ -0.61
SF3B3-207ENST00000566095 STXBP3O00186 592 aa11.25□□□□□ -0.61
SF3B3-207ENST00000566095 YEATS4O95619 227 aa11.25□□□□□ -0.61
SF3B3-207ENST00000566095 FOSP01100 380 aaPredicted RBP11.25□□□□□ -0.61
SF3B3-207ENST00000566095 ICAM1P05362 532 aa11.25□□□□□ -0.61
SF3B3-207ENST00000566095 DSG3P32926 999 aa11.25□□□□□ -0.61
SF3B3-207ENST00000566095 TRAPPC10P48553 1259 aa11.25□□□□□ -0.61
SF3B3-207ENST00000566095 ZNF157P51786 506 aaPredicted RBP11.25□□□□□ -0.61
SF3B3-207ENST00000566095 KIF23Q02241 960 aaPredicted RBP11.25□□□□□ -0.61
SF3B3-207ENST00000566095 SREBF2Q12772 1141 aa11.25□□□□□ -0.61
SF3B3-207ENST00000566095 AP3B2Q13367 1082 aa11.25□□□□□ -0.61
SF3B3-207ENST00000566095 WWC2Q6AWC2 1192 aa11.25□□□□□ -0.61
SF3B3-207ENST00000566095 RGMBQ6NW40 437 aa11.25□□□□□ -0.61
SF3B3-207ENST00000566095 KRT25Q7Z3Z0 450 aa11.25□□□□□ -0.61
SF3B3-207ENST00000566095 CCDC84Q86UT8 332 aaPredicted RBP11.25□□□□□ -0.61
SF3B3-207ENST00000566095 NOSTRINQ8IVI9 506 aa11.25□□□□□ -0.61
SF3B3-207ENST00000566095 BLIDQ8IZY5 108 aa11.25□□□□□ -0.61
SF3B3-207ENST00000566095 REXO1Q8N1G1 1221 aaKnown RBP11.25□□□□□ -0.61
SF3B3-207ENST00000566095 JMYQ8N9B5 988 aa11.25□□□□□ -0.61
SF3B3-207ENST00000566095 CLMNQ96JQ2 1002 aa11.25□□□□□ -0.61
SF3B3-207ENST00000566095 ZMYND12Q9H0C1 365 aa11.25□□□□□ -0.61
SF3B3-207ENST00000566095 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.25□□□□□ -0.61
SF3B3-207ENST00000566095 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.25□□□□□ -0.61
SF3B3-207ENST00000566095 RCOR1Q9UKL0 485 aa11.25□□□□□ -0.61
SF3B3-207ENST00000566095 ABT1Q9ULW3 272 aaKnown RBP11.25□□□□□ -0.61
SF3B3-207ENST00000566095 FZD1Q9UP38 647 aa11.25□□□□□ -0.61
SF3B3-207ENST00000566095 RABGAP1Q9Y3P9 1069 aa11.25□□□□□ -0.61
SF3B3-207ENST00000566095 DDX49Q9Y6V7 483 aaKnown RBP11.25□□□□□ -0.61
SF3B3-207ENST00000566095 FOSBP53539 338 aa11.24□□□□□ -0.61
SF3B3-207ENST00000566095 CCNA1P78396 465 aa11.24□□□□□ -0.61
SF3B3-207ENST00000566095 GUCY1B3Q02153 619 aa11.24□□□□□ -0.61
SF3B3-207ENST00000566095 ORC2Q13416 577 aaPredicted RBP11.24□□□□□ -0.61
SF3B3-207ENST00000566095 NBR1Q14596 966 aa11.24□□□□□ -0.61
SF3B3-207ENST00000566095 GSE1Q14687 1217 aa11.24□□□□□ -0.61
SF3B3-207ENST00000566095 SPRYD7Q5W111 196 aa11.24□□□□□ -0.61
SF3B3-207ENST00000566095 SAMD1Q6SPF0 538 aaPredicted RBP11.24□□□□□ -0.61
SF3B3-207ENST00000566095 MOB2Q70IA6 237 aa11.24□□□□□ -0.61
SF3B3-207ENST00000566095 ANKRD23Q86SG2 305 aa11.24□□□□□ -0.61
SF3B3-207ENST00000566095 GPKOWQ92917 476 aaPredicted RBP eCLIP11.24□□□□□ -0.61
SF3B3-207ENST00000566095 PARK7Q99497 189 aaKnown RBP11.24□□□□□ -0.61
SF3B3-207ENST00000566095 PSTPIP2Q9H939 334 aa11.24□□□□□ -0.61
SF3B3-207ENST00000566095 SLC38A10Q9HBR0 1119 aa11.24□□□□□ -0.61
SF3B3-207ENST00000566095 RIC8AQ9NPQ8 531 aa11.24□□□□□ -0.61
SF3B3-207ENST00000566095 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.24□□□□□ -0.61
SF3B3-207ENST00000566095 RTEL1Q9NZ71 1219 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms