RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 PDIA4P13667 645 aaKnown RBP8.99□□□□□ -0.97
CDH1-208ENST00000565810 PDCP20941 246 aa8.99□□□□□ -0.97
CDH1-208ENST00000565810 GJB2P29033 226 aa8.99□□□□□ -0.97
CDH1-208ENST00000565810 GCLCP48506 637 aaPredicted RBP8.99□□□□□ -0.97
CDH1-208ENST00000565810 SLC4A3P48751 1232 aa8.99□□□□□ -0.97
CDH1-208ENST00000565810 VEGFBP49765 207 aa8.99□□□□□ -0.97
CDH1-208ENST00000565810 OAZ1P54368 228 aa8.99□□□□□ -0.97
CDH1-208ENST00000565810 HERVK_113P62684 666 aa8.99□□□□□ -0.97
CDH1-208ENST00000565810 HTRA3P83110 453 aa8.99□□□□□ -0.97
CDH1-208ENST00000565810 TAF1CQ15572 869 aaPredicted RBP8.99□□□□□ -0.97
CDH1-208ENST00000565810 PFKFB3Q16875 520 aaPredicted RBP8.99□□□□□ -0.97
CDH1-208ENST00000565810 QRICH1Q2TAL8 776 aa8.99□□□□□ -0.97
CDH1-208ENST00000565810 CCDC174Q6PII3 467 aa8.99□□□□□ -0.97
CDH1-208ENST00000565810 LBX2Q6XYB7 198 aa8.99□□□□□ -0.97
CDH1-208ENST00000565810 HEATR3Q7Z4Q2 680 aa8.99□□□□□ -0.97
CDH1-208ENST00000565810 FBXO11Q86XK2 927 aa8.99□□□□□ -0.97
CDH1-208ENST00000565810 CPXCR1Q8N123 301 aa8.99□□□□□ -0.97
CDH1-208ENST00000565810 FAM43AQ8N2R8 423 aa8.99□□□□□ -0.97
CDH1-208ENST00000565810 ZNF713Q8N859 430 aaPredicted RBP8.99□□□□□ -0.97
CDH1-208ENST00000565810 MTMR8Q96EF0 704 aa8.99□□□□□ -0.97
CDH1-208ENST00000565810 PTPN18Q99952 460 aa8.99□□□□□ -0.97
CDH1-208ENST00000565810 ALG1Q9BT22 464 aa8.99□□□□□ -0.97
CDH1-208ENST00000565810 SLC38A10Q9HBR0 1119 aa8.99□□□□□ -0.97
CDH1-208ENST00000565810 ZFYVE28Q9HCC9 887 aa8.99□□□□□ -0.97
CDH1-208ENST00000565810 DOCK1Q14185 1865 aa8.99□□□□□ -0.97
CDH1-208ENST00000565810 GREB1LQ9C091 1923 aaPredicted RBP8.98□□□□□ -0.97
CDH1-208ENST00000565810 hCG_1642624A0A1W2PR95 340 aa8.98□□□□□ -0.97
CDH1-208ENST00000565810 H3BQV1 296 aa8.98□□□□□ -0.97
CDH1-208ENST00000565810 IGF2BP3O00425 579 aaKnown RBP eCLIP8.98□□□□□ -0.97
CDH1-208ENST00000565810 ICAM1P05362 532 aa8.98□□□□□ -0.97
CDH1-208ENST00000565810 CYP2C8P10632 490 aa8.98□□□□□ -0.97
CDH1-208ENST00000565810 COPB2P35606 906 aa8.98□□□□□ -0.97
CDH1-208ENST00000565810 STAT3P40763 770 aa8.98□□□□□ -0.97
CDH1-208ENST00000565810 SNAP25P60880 206 aa8.98□□□□□ -0.97
CDH1-208ENST00000565810 CCNA1P78396 465 aa8.98□□□□□ -0.97
CDH1-208ENST00000565810 PLS1Q14651 629 aa8.98□□□□□ -0.97
CDH1-208ENST00000565810 IFFO2Q5TF58 517 aa8.98□□□□□ -0.97
CDH1-208ENST00000565810 LARP1BQ659C4 914 aaKnown RBP8.98□□□□□ -0.97
CDH1-208ENST00000565810 CCAR1Q8IX12 1150 aaKnown RBP8.98□□□□□ -0.97
CDH1-208ENST00000565810 FAM177A1Q8N128 213 aaPredicted RBP8.98□□□□□ -0.97
CDH1-208ENST00000565810 CCDC148Q8NFR7 591 aa8.98□□□□□ -0.97
CDH1-208ENST00000565810 C8orf76Q96K31 380 aa8.98□□□□□ -0.97
CDH1-208ENST00000565810 PAGR1Q9BTK6 254 aa8.98□□□□□ -0.97
CDH1-208ENST00000565810 RAVER2Q9HCJ3 691 aaKnown RBP8.98□□□□□ -0.97
CDH1-208ENST00000565810 CCPG1Q9ULG6 757 aa8.98□□□□□ -0.97
CDH1-208ENST00000565810 ADAMTS5Q9UNA0 930 aa8.98□□□□□ -0.97
CDH1-208ENST00000565810 MRPL11Q9Y3B7 192 aaKnown RBP8.98□□□□□ -0.97
CDH1-208ENST00000565810 RABGAP1Q9Y3P9 1069 aa8.98□□□□□ -0.97
CDH1-208ENST00000565810 PCDHA1Q9Y5I3 950 aa8.98□□□□□ -0.97
CDH1-208ENST00000565810 ATP2A1O14983 1001 aa8.97□□□□□ -0.97
CDH1-208ENST00000565810 CA12O43570 354 aa8.97□□□□□ -0.97
CDH1-208ENST00000565810 SLC25A27O95847 323 aa8.97□□□□□ -0.97
CDH1-208ENST00000565810 FDPSP14324 419 aaKnown RBP8.97□□□□□ -0.97
CDH1-208ENST00000565810 GNA11P29992 359 aa8.97□□□□□ -0.97
CDH1-208ENST00000565810 NAPAP54920 295 aa8.97□□□□□ -0.97
CDH1-208ENST00000565810 NLRP5P59047 1200 aa8.97□□□□□ -0.97
CDH1-208ENST00000565810 TMEM132BQ14DG7 1078 aa8.97□□□□□ -0.97
CDH1-208ENST00000565810 SAFBQ15424 915 aaKnown RBP eCLIP8.97□□□□□ -0.97
CDH1-208ENST00000565810 PKN1Q16512 942 aa8.97□□□□□ -0.97
CDH1-208ENST00000565810 SLC35G1Q2M3R5 365 aa8.97□□□□□ -0.97
CDH1-208ENST00000565810 TKFCQ3LXA3 575 aa8.97□□□□□ -0.97
CDH1-208ENST00000565810 USH1GQ495M9 461 aa8.97□□□□□ -0.97
CDH1-208ENST00000565810 PPP1R18Q6NYC8 613 aa8.97□□□□□ -0.97
CDH1-208ENST00000565810 GPRC5AQ8NFJ5 357 aa8.97□□□□□ -0.97
CDH1-208ENST00000565810 COA7Q96BR5 231 aa8.97□□□□□ -0.97
CDH1-208ENST00000565810 ZIC5Q96T25 663 aa8.97□□□□□ -0.97
CDH1-208ENST00000565810 BEGAINQ9BUH8 593 aa8.97□□□□□ -0.97
CDH1-208ENST00000565810 TEX13BQ9BXU2 312 aa8.97□□□□□ -0.97
CDH1-208ENST00000565810 SPATC1LQ9H0A9 340 aa8.97□□□□□ -0.97
CDH1-208ENST00000565810 GLT8D2Q9H1C3 349 aa8.97□□□□□ -0.97
CDH1-208ENST00000565810 BRMS1Q9HCU9 246 aa8.97□□□□□ -0.97
CDH1-208ENST00000565810 SH3GLB2Q9NR46 395 aa8.97□□□□□ -0.97
CDH1-208ENST00000565810 BARHL2Q9NY43 387 aa8.97□□□□□ -0.97
CDH1-208ENST00000565810 TRPM7Q96QT4 1865 aa8.97□□□□□ -0.97
CDH1-208ENST00000565810 ABCB11O95342 1321 aa8.97□□□□□ -0.97
CDH1-208ENST00000565810 MYH8P13535 1937 aa8.97□□□□□ -0.97
CDH1-208ENST00000565810 SMCO2A6NFE2 343 aa8.96□□□□□ -0.98
CDH1-208ENST00000565810 DTNBO60941 627 aa8.96□□□□□ -0.98
CDH1-208ENST00000565810 ALAS1P13196 640 aa8.96□□□□□ -0.98
CDH1-208ENST00000565810 CALML3P27482 149 aa8.96□□□□□ -0.98
CDH1-208ENST00000565810 MRPL12P52815 198 aaKnown RBP8.96□□□□□ -0.98
CDH1-208ENST00000565810 FOSBP53539 338 aa8.96□□□□□ -0.98
CDH1-208ENST00000565810 ERVK-9P63128 1117 aa8.96□□□□□ -0.98
CDH1-208ENST00000565810 ERVK-24P63145 666 aa8.96□□□□□ -0.98
CDH1-208ENST00000565810 MAP2K1Q02750 393 aaPredicted RBP8.96□□□□□ -0.98
CDH1-208ENST00000565810 WWC2Q6AWC2 1192 aa8.96□□□□□ -0.98
CDH1-208ENST00000565810 SNRNP48Q6IEG0 339 aaKnown RBP8.96□□□□□ -0.98
CDH1-208ENST00000565810 GALNT17Q6IS24 598 aa8.96□□□□□ -0.98
CDH1-208ENST00000565810 MCF2L2Q86YR7 1114 aa8.96□□□□□ -0.98
CDH1-208ENST00000565810 RIOX2Q8IUF8 465 aa8.96□□□□□ -0.98
CDH1-208ENST00000565810 ANKRD13CQ8N6S4 541 aa8.96□□□□□ -0.98
CDH1-208ENST00000565810 RGS22Q8NE09 1264 aa8.96□□□□□ -0.98
CDH1-208ENST00000565810 CHST13Q8NET6 341 aa8.96□□□□□ -0.98
CDH1-208ENST00000565810 REPS2Q8NFH8 660 aa8.96□□□□□ -0.98
CDH1-208ENST00000565810 BICD2Q8TD16 824 aa8.96□□□□□ -0.98
CDH1-208ENST00000565810 GPKOWQ92917 476 aaPredicted RBP eCLIP8.96□□□□□ -0.98
CDH1-208ENST00000565810 CUL5Q93034 780 aa8.96□□□□□ -0.98
CDH1-208ENST00000565810 AGBL1Q96MI9 1066 aa8.96□□□□□ -0.98
CDH1-208ENST00000565810 TRERF1Q96PN7 1200 aa8.96□□□□□ -0.98
CDH1-208ENST00000565810 C6orf50Q9HD87 102 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms