RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 BRMS1Q9HCU9 246 aa21.97■■□□□ 1.11
CSPG4P13-201ENST00000565545 CCL15-CCL14A0A0B4J2E2 113 aa21.96■■□□□ 1.11
CSPG4P13-201ENST00000565545 RAD21O60216 631 aa21.96■■□□□ 1.11
CSPG4P13-201ENST00000565545 PLA2G6O60733 806 aa21.96■■□□□ 1.11
CSPG4P13-201ENST00000565545 U2AF2P26368 475 aaKnown RBP eCLIP21.96■■□□□ 1.11
CSPG4P13-201ENST00000565545 CALML3P27482 149 aa21.96■■□□□ 1.11
CSPG4P13-201ENST00000565545 GTF2A2P52657 109 aa21.96■■□□□ 1.11
CSPG4P13-201ENST00000565545 USP14P54578 494 aa21.96■■□□□ 1.11
CSPG4P13-201ENST00000565545 KRT85P78386 507 aa21.96■■□□□ 1.11
CSPG4P13-201ENST00000565545 GNL2Q13823 731 aaKnown RBP21.96■■□□□ 1.11
CSPG4P13-201ENST00000565545 TAF1CQ15572 869 aaPredicted RBP21.96■■□□□ 1.11
CSPG4P13-201ENST00000565545 CCL15Q16663 113 aa21.96■■□□□ 1.11
CSPG4P13-201ENST00000565545 GALNT17Q6IS24 598 aa21.96■■□□□ 1.11
CSPG4P13-201ENST00000565545 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.96■■□□□ 1.11
CSPG4P13-201ENST00000565545 CNKSR2Q8WXI2 1034 aa21.96■■□□□ 1.11
CSPG4P13-201ENST00000565545 LPAR1Q92633 364 aa21.96■■□□□ 1.11
CSPG4P13-201ENST00000565545 ARMC5Q96C12 935 aa21.96■■□□□ 1.11
CSPG4P13-201ENST00000565545 MTMR8Q96EF0 704 aa21.96■■□□□ 1.11
CSPG4P13-201ENST00000565545 MS4A4AQ96JQ5 239 aa21.96■■□□□ 1.11
CSPG4P13-201ENST00000565545 ZNF396Q96N95 335 aaPredicted RBP21.96■■□□□ 1.11
CSPG4P13-201ENST00000565545 FEZ1Q99689 392 aa21.96■■□□□ 1.11
CSPG4P13-201ENST00000565545 PHF20Q9BVI0 1012 aa21.96■■□□□ 1.11
CSPG4P13-201ENST00000565545 GJB4Q9NTQ9 266 aa21.96■■□□□ 1.11
CSPG4P13-201ENST00000565545 hCG_1642624A0A1W2PR95 340 aa21.95■■□□□ 1.1
CSPG4P13-201ENST00000565545 EN2P19622 333 aaPredicted RBP21.95■■□□□ 1.1
CSPG4P13-201ENST00000565545 VGLL4Q14135 290 aa21.95■■□□□ 1.1
CSPG4P13-201ENST00000565545 ADGRF4Q8IZF3 695 aa21.95■■□□□ 1.1
CSPG4P13-201ENST00000565545 BRI3BPQ8WY22 251 aa21.95■■□□□ 1.1
CSPG4P13-201ENST00000565545 JMJD4Q9H9V9 463 aa21.95■■□□□ 1.1
CSPG4P13-201ENST00000565545 BARHL2Q9NY43 387 aa21.95■■□□□ 1.1
CSPG4P13-201ENST00000565545 VPS54Q9P1Q0 977 aa21.95■■□□□ 1.1
CSPG4P13-201ENST00000565545 CFAP45Q9UL16 551 aa21.95■■□□□ 1.1
CSPG4P13-201ENST00000565545 PNMA6FA0A0J9YX94 578 aa21.94■■□□□ 1.1
CSPG4P13-201ENST00000565545 USP17L10C9JJH3 530 aa21.94■■□□□ 1.1
CSPG4P13-201ENST00000565545 PTPRAP18433 802 aa21.94■■□□□ 1.1
CSPG4P13-201ENST00000565545 DNM1Q05193 864 aaKnown RBP21.94■■□□□ 1.1
CSPG4P13-201ENST00000565545 TTBK2Q6IQ55 1244 aa21.94■■□□□ 1.1
CSPG4P13-201ENST00000565545 CHURC1Q8WUH1 139 aa21.94■■□□□ 1.1
CSPG4P13-201ENST00000565545 OTUD5Q96G74 571 aa21.94■■□□□ 1.1
CSPG4P13-201ENST00000565545 PIGSQ96S52 555 aa21.94■■□□□ 1.1
CSPG4P13-201ENST00000565545 CPVLQ9H3G5 476 aa21.94■■□□□ 1.1
CSPG4P13-201ENST00000565545 VAT1LQ9HCJ6 419 aa21.94■■□□□ 1.1
CSPG4P13-201ENST00000565545 ISY1Q9ULR0 285 aaKnown RBP21.94■■□□□ 1.1
CSPG4P13-201ENST00000565545 KCNJ14Q9UNX9 436 aa21.94■■□□□ 1.1
CSPG4P13-201ENST00000565545 KRT2P35908 639 aa21.93■■□□□ 1.1
CSPG4P13-201ENST00000565545 FAM160B2Q86V87 743 aa21.93■■□□□ 1.1
CSPG4P13-201ENST00000565545 DIS3L2Q8IYB7 885 aaKnown RBP21.93■■□□□ 1.1
CSPG4P13-201ENST00000565545 TMEM87AQ8NBN3 555 aa21.93■■□□□ 1.1
CSPG4P13-201ENST00000565545 ZNF280CQ8ND82 737 aa21.93■■□□□ 1.1
CSPG4P13-201ENST00000565545 PHIPQ8WWQ0 1821 aa21.93■■□□□ 1.1
CSPG4P13-201ENST00000565545 PIBF1Q8WXW3 757 aa21.93■■□□□ 1.1
CSPG4P13-201ENST00000565545 ZKSCAN4Q969J2 545 aaPredicted RBP21.93■■□□□ 1.1
CSPG4P13-201ENST00000565545 SCAND2PQ9GZW5 306 aaPredicted RBP21.93■■□□□ 1.1
CSPG4P13-201ENST00000565545 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.93■■□□□ 1.1
CSPG4P13-201ENST00000565545 C19orf81C9J6K1 198 aa21.92■■□□□ 1.1
CSPG4P13-201ENST00000565545 TMEM232C9JQI7 657 aa21.92■■□□□ 1.1
CSPG4P13-201ENST00000565545 ZBTB5O15062 677 aa21.92■■□□□ 1.1
CSPG4P13-201ENST00000565545 WDR46O15213 610 aaKnown RBP21.92■■□□□ 1.1
CSPG4P13-201ENST00000565545 NLRP5P59047 1200 aa21.92■■□□□ 1.1
CSPG4P13-201ENST00000565545 FOXD4L6Q3SYB3 417 aaPredicted RBP21.92■■□□□ 1.1
CSPG4P13-201ENST00000565545 SLC9C1Q4G0N8 1177 aa21.92■■□□□ 1.1
CSPG4P13-201ENST00000565545 SYDE2Q5VT97 1194 aa21.92■■□□□ 1.1
CSPG4P13-201ENST00000565545 WWC2Q6AWC2 1192 aa21.92■■□□□ 1.1
CSPG4P13-201ENST00000565545 PPP1R18Q6NYC8 613 aa21.92■■□□□ 1.1
CSPG4P13-201ENST00000565545 FOXD4L3Q6VB84 417 aaPredicted RBP21.92■■□□□ 1.1
CSPG4P13-201ENST00000565545 FEM1BQ9UK73 627 aa21.92■■□□□ 1.1
CSPG4P13-201ENST00000565545 ESYT2A0FGR8 921 aa21.91■■□□□ 1.1
CSPG4P13-201ENST00000565545 KIF28PB7ZC32 967 aa21.91■■□□□ 1.1
CSPG4P13-201ENST00000565545 STXBP3O00186 592 aa21.91■■□□□ 1.1
CSPG4P13-201ENST00000565545 SLC16A2P36021 539 aa21.91■■□□□ 1.1
CSPG4P13-201ENST00000565545 STAT2P52630 851 aa21.91■■□□□ 1.1
CSPG4P13-201ENST00000565545 BACE1P56817 501 aa21.91■■□□□ 1.1
CSPG4P13-201ENST00000565545 CAP1Q01518 475 aa21.91■■□□□ 1.1
CSPG4P13-201ENST00000565545 TRAF1Q13077 416 aa21.91■■□□□ 1.1
CSPG4P13-201ENST00000565545 HABP4Q5JVS0 413 aaKnown RBP21.91■■□□□ 1.1
CSPG4P13-201ENST00000565545 HEATR3Q7Z4Q2 680 aa21.91■■□□□ 1.1
CSPG4P13-201ENST00000565545 HOMER1Q86YM7 354 aa21.91■■□□□ 1.1
CSPG4P13-201ENST00000565545 NOSTRINQ8IVI9 506 aa21.91■■□□□ 1.1
CSPG4P13-201ENST00000565545 FAM43AQ8N2R8 423 aa21.91■■□□□ 1.1
CSPG4P13-201ENST00000565545 DAGLBQ8NCG7 672 aa21.91■■□□□ 1.1
CSPG4P13-201ENST00000565545 CNPY2Q9Y2B0 182 aa21.91■■□□□ 1.1
CSPG4P13-201ENST00000565545 BTBD18B2RXH4 712 aa21.9■■□□□ 1.1
CSPG4P13-201ENST00000565545 NCLP19338 710 aaKnown RBP21.9■■□□□ 1.1
CSPG4P13-201ENST00000565545 GNA11P29992 359 aa21.9■■□□□ 1.1
CSPG4P13-201ENST00000565545 SKOR2Q2VWA4 1001 aaPredicted RBP21.9■■□□□ 1.1
CSPG4P13-201ENST00000565545 KIAA1755Q5JYT7 1200 aa21.9■■□□□ 1.1
CSPG4P13-201ENST00000565545 FAM83BQ5T0W9 1011 aa21.9■■□□□ 1.1
CSPG4P13-201ENST00000565545 MYSM1Q5VVJ2 828 aa21.9■■□□□ 1.1
CSPG4P13-201ENST00000565545 CCDC84Q86UT8 332 aaPredicted RBP21.9■■□□□ 1.1
CSPG4P13-201ENST00000565545 SPICE1Q8N0Z3 855 aa21.9■■□□□ 1.1
CSPG4P13-201ENST00000565545 GPKOWQ92917 476 aaPredicted RBP eCLIP21.9■■□□□ 1.1
CSPG4P13-201ENST00000565545 SHISA4Q96DD7 197 aa21.9■■□□□ 1.1
CSPG4P13-201ENST00000565545 C12orf42Q96LP6 360 aa21.9■■□□□ 1.1
CSPG4P13-201ENST00000565545 NUP88Q99567 741 aaPredicted RBP21.9■■□□□ 1.1
CSPG4P13-201ENST00000565545 PCDHA4Q9UN74 947 aa21.9■■□□□ 1.1
CSPG4P13-201ENST00000565545 PTCH2Q9Y6C5 1203 aa21.9■■□□□ 1.1
CSPG4P13-201ENST00000565545 ZHX2Q9Y6X8 837 aa21.9■■□□□ 1.1
CSPG4P13-201ENST00000565545 OTOFQ9HC10 1997 aa21.9■■□□□ 1.1
CSPG4P13-201ENST00000565545 ELP1O95163 1332 aa21.89■■□□□ 1.1
CSPG4P13-201ENST00000565545 MYCP01106 439 aaPredicted RBP21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms