RNA–Protein interactions for RNA: ENST00000565377.1

RPUSD1-205, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 2

Gene RPUSD1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-205ENST00000565377 EFCC1Q9HA90 598 aa23.33■■□□□ 1.33
RPUSD1-205ENST00000565377 A0A0G2JMZ2 1700 aa23.33■■□□□ 1.32
RPUSD1-205ENST00000565377 RLFQ13129 1914 aa23.32■■□□□ 1.32
RPUSD1-205ENST00000565377 NID2Q14112 1375 aa23.32■■□□□ 1.32
RPUSD1-205ENST00000565377 PKN2Q16513 984 aaKnown RBP23.32■■□□□ 1.32
RPUSD1-205ENST00000565377 Q3C1V9 767 aa23.32■■□□□ 1.32
RPUSD1-205ENST00000565377 CPLX2Q6PUV4 134 aaKnown RBP23.32■■□□□ 1.32
RPUSD1-205ENST00000565377 NCAPG2Q86XI2 1143 aa23.32■■□□□ 1.32
RPUSD1-205ENST00000565377 CHST13Q8NET6 341 aa23.32■■□□□ 1.32
RPUSD1-205ENST00000565377 RIOX1Q9H6W3 641 aa23.32■■□□□ 1.32
RPUSD1-205ENST00000565377 PARP14Q460N5 1801 aa23.31■■□□□ 1.32
RPUSD1-205ENST00000565377 WDR78Q5VTH9 848 aa23.31■■□□□ 1.32
RPUSD1-205ENST00000565377 POTEEQ6S8J3 1075 aa23.31■■□□□ 1.32
RPUSD1-205ENST00000565377 PLEKHH3Q7Z736 793 aa23.31■■□□□ 1.32
RPUSD1-205ENST00000565377 SOCS4Q8WXH5 440 aa23.31■■□□□ 1.32
RPUSD1-205ENST00000565377 RRP36Q96EU6 259 aaKnown RBP23.31■■□□□ 1.32
RPUSD1-205ENST00000565377 MAF1Q9H063 256 aa23.31■■□□□ 1.32
RPUSD1-205ENST00000565377 JMJD4Q9H9V9 463 aa23.31■■□□□ 1.32
RPUSD1-205ENST00000565377 RAVER2Q9HCJ3 691 aaKnown RBP23.31■■□□□ 1.32
RPUSD1-205ENST00000565377 RBM27Q9P2N5 1060 aaKnown RBP23.31■■□□□ 1.32
RPUSD1-205ENST00000565377 SEC63Q9UGP8 760 aaKnown RBP23.31■■□□□ 1.32
RPUSD1-205ENST00000565377 CCPG1Q9ULG6 757 aa23.31■■□□□ 1.32
RPUSD1-205ENST00000565377 ZBTB5O15062 677 aa23.3■■□□□ 1.32
RPUSD1-205ENST00000565377 ERCC3P19447 782 aa23.3■■□□□ 1.32
RPUSD1-205ENST00000565377 PDIA3P30101 505 aaKnown RBP23.3■■□□□ 1.32
RPUSD1-205ENST00000565377 AK2P54819 239 aa23.3■■□□□ 1.32
RPUSD1-205ENST00000565377 CDC37Q16543 378 aaPredicted RBP23.3■■□□□ 1.32
RPUSD1-205ENST00000565377 CCDC174Q6PII3 467 aa23.3■■□□□ 1.32
RPUSD1-205ENST00000565377 TMTC3Q6ZXV5 915 aa23.3■■□□□ 1.32
RPUSD1-205ENST00000565377 CTU1Q7Z7A3 348 aaKnown RBP23.3■■□□□ 1.32
RPUSD1-205ENST00000565377 CCDC144CPQ8IYA2 1237 aa23.3■■□□□ 1.32
RPUSD1-205ENST00000565377 ABRAQ8N0Z2 381 aa23.3■■□□□ 1.32
RPUSD1-205ENST00000565377 VAT1LQ9HCJ6 419 aa23.3■■□□□ 1.32
RPUSD1-205ENST00000565377 RXRAP19793 462 aa23.29■■□□□ 1.32
RPUSD1-205ENST00000565377 GPR142Q7Z601 462 aa23.29■■□□□ 1.32
RPUSD1-205ENST00000565377 MTMR8Q96EF0 704 aa23.29■■□□□ 1.32
RPUSD1-205ENST00000565377 TRIM47Q96LD4 638 aa23.29■■□□□ 1.32
RPUSD1-205ENST00000565377 KIF2CQ99661 725 aa23.29■■□□□ 1.32
RPUSD1-205ENST00000565377 AMNQ9BXJ7 453 aa23.29■■□□□ 1.32
RPUSD1-205ENST00000565377 SLC5A4Q9NY91 659 aa23.29■■□□□ 1.32
RPUSD1-205ENST00000565377 PNMA6FA0A0J9YX94 578 aa23.28■■□□□ 1.32
RPUSD1-205ENST00000565377 FCER1AP12319 257 aa23.28■■□□□ 1.32
RPUSD1-205ENST00000565377 MCM2P49736 904 aa23.28■■□□□ 1.32
RPUSD1-205ENST00000565377 FBXO11Q86XK2 927 aa23.28■■□□□ 1.32
RPUSD1-205ENST00000565377 NUDT12Q9BQG2 462 aa23.28■■□□□ 1.32
RPUSD1-205ENST00000565377 PORCNQ9H237 461 aa23.28■■□□□ 1.32
RPUSD1-205ENST00000565377 SLKQ9H2G2 1235 aaPredicted RBP23.28■■□□□ 1.32
RPUSD1-205ENST00000565377 TRIM17Q9Y577 477 aa23.28■■□□□ 1.32
RPUSD1-205ENST00000565377 SLC15A5A6NIM6 579 aa23.27■■□□□ 1.32
RPUSD1-205ENST00000565377 CPLX1O14810 134 aa23.27■■□□□ 1.32
RPUSD1-205ENST00000565377 CDKL5O76039 1030 aa23.27■■□□□ 1.32
RPUSD1-205ENST00000565377 KCTD2Q14681 263 aa23.27■■□□□ 1.32
RPUSD1-205ENST00000565377 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.27■■□□□ 1.32
RPUSD1-205ENST00000565377 ZSCAN31Q96LW9 406 aaPredicted RBP23.27■■□□□ 1.32
RPUSD1-205ENST00000565377 ACAD9Q9H845 621 aa23.27■■□□□ 1.32
RPUSD1-205ENST00000565377 SRRDQ9UH36 339 aa23.27■■□□□ 1.32
RPUSD1-205ENST00000565377 LIMCH1Q9UPQ0 1083 aa23.27■■□□□ 1.32
RPUSD1-205ENST00000565377 ZNF536O15090 1300 aa23.27■■□□□ 1.32
RPUSD1-205ENST00000565377 ABCB11O95342 1321 aa23.27■■□□□ 1.32
RPUSD1-205ENST00000565377 ALAS1P13196 640 aa23.26■■□□□ 1.31
RPUSD1-205ENST00000565377 PTPREP23469 700 aa23.26■■□□□ 1.31
RPUSD1-205ENST00000565377 SLC4A3P48751 1232 aa23.26■■□□□ 1.31
RPUSD1-205ENST00000565377 AKAP17AQ02040 695 aaKnown RBP23.26■■□□□ 1.31
RPUSD1-205ENST00000565377 QRICH1Q2TAL8 776 aa23.26■■□□□ 1.31
RPUSD1-205ENST00000565377 OTOP1Q7RTM1 612 aa23.26■■□□□ 1.31
RPUSD1-205ENST00000565377 RAB11FIP4Q86YS3 637 aa23.26■■□□□ 1.31
RPUSD1-205ENST00000565377 SRBD1Q8N5C6 995 aaKnown RBP23.26■■□□□ 1.31
RPUSD1-205ENST00000565377 AGBL1Q96MI9 1066 aa23.26■■□□□ 1.31
RPUSD1-205ENST00000565377 TRERF1Q96PN7 1200 aa23.26■■□□□ 1.31
RPUSD1-205ENST00000565377 CPVLQ9H3G5 476 aa23.26■■□□□ 1.31
RPUSD1-205ENST00000565377 HPS5Q9UPZ3 1129 aa23.26■■□□□ 1.31
RPUSD1-205ENST00000565377 MRPL11Q9Y3B7 192 aaKnown RBP23.26■■□□□ 1.31
RPUSD1-205ENST00000565377 PLEKHA8P1O95397 391 aa23.25■■□□□ 1.31
RPUSD1-205ENST00000565377 RGS2P41220 211 aa23.25■■□□□ 1.31
RPUSD1-205ENST00000565377 HOMER1Q86YM7 354 aa23.25■■□□□ 1.31
RPUSD1-205ENST00000565377 TRMT44Q8IYL2 757 aaKnown RBP23.25■■□□□ 1.31
RPUSD1-205ENST00000565377 PIGSQ96S52 555 aa23.25■■□□□ 1.31
RPUSD1-205ENST00000565377 MMP19Q99542 508 aa23.25■■□□□ 1.31
RPUSD1-205ENST00000565377 ARHGAP39Q9C0H5 1083 aa23.25■■□□□ 1.31
RPUSD1-205ENST00000565377 RNF146Q9NTX7 359 aa23.25■■□□□ 1.31
RPUSD1-205ENST00000565377 PFASO15067 1338 aa23.25■■□□□ 1.31
RPUSD1-205ENST00000565377 hCG_1984214I3L0E3 225 aa23.24■■□□□ 1.31
RPUSD1-205ENST00000565377 CYTH3O43739 400 aa23.24■■□□□ 1.31
RPUSD1-205ENST00000565377 PEX10O60683 326 aa23.24■■□□□ 1.31
RPUSD1-205ENST00000565377 PFKFB2O60825 505 aa23.24■■□□□ 1.31
RPUSD1-205ENST00000565377 SNAP25P60880 206 aa23.24■■□□□ 1.31
RPUSD1-205ENST00000565377 GRB14Q14449 540 aa23.24■■□□□ 1.31
RPUSD1-205ENST00000565377 MCF2L2Q86YR7 1114 aa23.24■■□□□ 1.31
RPUSD1-205ENST00000565377 TRIM22Q8IYM9 498 aa23.24■■□□□ 1.31
RPUSD1-205ENST00000565377 ANKRD35Q8N283 1001 aa23.24■■□□□ 1.31
RPUSD1-205ENST00000565377 SAMD3Q8N6K7 520 aa23.24■■□□□ 1.31
RPUSD1-205ENST00000565377 ZNF713Q8N859 430 aaPredicted RBP23.24■■□□□ 1.31
RPUSD1-205ENST00000565377 SH2B1Q9NRF2 756 aaPredicted RBP23.24■■□□□ 1.31
RPUSD1-205ENST00000565377 TPCN1Q9ULQ1 816 aa23.24■■□□□ 1.31
RPUSD1-205ENST00000565377 IFNAR1P17181 557 aa23.23■■□□□ 1.31
RPUSD1-205ENST00000565377 CDC27P30260 824 aa23.23■■□□□ 1.31
RPUSD1-205ENST00000565377 ADD1P35611 737 aaKnown RBP23.23■■□□□ 1.31
RPUSD1-205ENST00000565377 CCT2P78371 535 aaKnown RBP23.23■■□□□ 1.31
RPUSD1-205ENST00000565377 IRF5Q13568 498 aa23.23■■□□□ 1.31
RPUSD1-205ENST00000565377 MORN1Q5T089 497 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms