RNA–Protein interactions for RNA: ENST00000564791.5

SNX29-204, Transcript of sorting nexin 29, humanhuman

TSL 1 (best)

Gene SNX29, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-204ENST00000564791 PCDHA6Q9UN73 950 aa12.9□□□□□ -0.34
SNX29-204ENST00000564791 CLEC11AQ9Y240 323 aa12.9□□□□□ -0.34
SNX29-204ENST00000564791 PCDHA8Q9Y5H6 950 aa12.9□□□□□ -0.34
SNX29-204ENST00000564791 ZHX2Q9Y6X8 837 aa12.9□□□□□ -0.34
SNX29-204ENST00000564791 TRIM75PA6NK02 468 aa12.89□□□□□ -0.35
SNX29-204ENST00000564791 SPTLC2O15270 562 aa12.89□□□□□ -0.35
SNX29-204ENST00000564791 PLA2G6O60733 806 aa12.89□□□□□ -0.35
SNX29-204ENST00000564791 ATP2B1P20020 1258 aa12.89□□□□□ -0.35
SNX29-204ENST00000564791 GNA11P29992 359 aa12.89□□□□□ -0.35
SNX29-204ENST00000564791 IREB2P48200 963 aaKnown RBP12.89□□□□□ -0.35
SNX29-204ENST00000564791 ADCY7P51828 1080 aa12.89□□□□□ -0.35
SNX29-204ENST00000564791 USP14P54578 494 aa12.89□□□□□ -0.35
SNX29-204ENST00000564791 BACE1P56817 501 aa12.89□□□□□ -0.35
SNX29-204ENST00000564791 PTPAQ15257 358 aa12.89□□□□□ -0.35
SNX29-204ENST00000564791 FAM160B2Q86V87 743 aa12.89□□□□□ -0.35
SNX29-204ENST00000564791 KCNG4Q8TDN1 519 aa12.89□□□□□ -0.35
SNX29-204ENST00000564791 CHURC1Q8WUH1 139 aa12.89□□□□□ -0.35
SNX29-204ENST00000564791 KIFC2Q96AC6 838 aa12.89□□□□□ -0.35
SNX29-204ENST00000564791 GZF1Q9H116 711 aaPredicted RBP12.89□□□□□ -0.35
SNX29-204ENST00000564791 RRAGCQ9HB90 399 aa12.89□□□□□ -0.35
SNX29-204ENST00000564791 FBXO28Q9NVF7 368 aa12.89□□□□□ -0.35
SNX29-204ENST00000564791 NOL7Q9UMY1 257 aaKnown RBP12.89□□□□□ -0.35
SNX29-204ENST00000564791 PCDHB6Q9Y5E3 794 aa12.89□□□□□ -0.35
SNX29-204ENST00000564791 GOLGA6L4A6NEF3 574 aa12.88□□□□□ -0.35
SNX29-204ENST00000564791 VCAM1P19320 739 aa12.88□□□□□ -0.35
SNX29-204ENST00000564791 ME1P48163 572 aa12.88□□□□□ -0.35
SNX29-204ENST00000564791 SLC39A14Q15043 492 aa12.88□□□□□ -0.35
SNX29-204ENST00000564791 CAVIN1Q6NZI2 390 aaKnown RBP12.88□□□□□ -0.35
SNX29-204ENST00000564791 SAMD1Q6SPF0 538 aaPredicted RBP12.88□□□□□ -0.35
SNX29-204ENST00000564791 MOB2Q70IA6 237 aa12.88□□□□□ -0.35
SNX29-204ENST00000564791 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.88□□□□□ -0.35
SNX29-204ENST00000564791 PCDHA1Q9Y5I3 950 aa12.88□□□□□ -0.35
SNX29-204ENST00000564791 CSADQ9Y600 493 aa12.88□□□□□ -0.35
SNX29-204ENST00000564791 RLFQ13129 1914 aa12.88□□□□□ -0.35
SNX29-204ENST00000564791 CCDC194A0A1B0GVG4 234 aa12.88□□□□□ -0.35
SNX29-204ENST00000564791 WNT7AO00755 349 aa12.88□□□□□ -0.35
SNX29-204ENST00000564791 TAL1P17542 331 aaPredicted RBP12.88□□□□□ -0.35
SNX29-204ENST00000564791 TTLL12Q14166 644 aaPredicted RBP12.88□□□□□ -0.35
SNX29-204ENST00000564791 TTC38Q5R3I4 469 aa12.88□□□□□ -0.35
SNX29-204ENST00000564791 MAP1SQ66K74 1059 aaPredicted RBP12.88□□□□□ -0.35
SNX29-204ENST00000564791 FBXO11Q86XK2 927 aa12.88□□□□□ -0.35
SNX29-204ENST00000564791 REXO1Q8N1G1 1221 aaKnown RBP12.88□□□□□ -0.35
SNX29-204ENST00000564791 BICD2Q8TD16 824 aa12.88□□□□□ -0.35
SNX29-204ENST00000564791 AMNQ9BXJ7 453 aa12.88□□□□□ -0.35
SNX29-204ENST00000564791 TANGO6Q9C0B7 1094 aa12.88□□□□□ -0.35
SNX29-204ENST00000564791 RANBP17Q9H2T7 1088 aaKnown RBP12.88□□□□□ -0.35
SNX29-204ENST00000564791 RIC8AQ9NPQ8 531 aa12.88□□□□□ -0.35
SNX29-204ENST00000564791 PCDHA7Q9UN72 937 aa12.88□□□□□ -0.35
SNX29-204ENST00000564791 AFG3L2Q9Y4W6 797 aa12.88□□□□□ -0.35
SNX29-204ENST00000564791 MARCKSP29966 332 aaPredicted RBP12.87□□□□□ -0.35
SNX29-204ENST00000564791 HMGCS2P54868 508 aa12.87□□□□□ -0.35
SNX29-204ENST00000564791 USH1GQ495M9 461 aa12.87□□□□□ -0.35
SNX29-204ENST00000564791 JAKMIP3Q5VZ66 844 aa12.87□□□□□ -0.35
SNX29-204ENST00000564791 CCDC174Q6PII3 467 aa12.87□□□□□ -0.35
SNX29-204ENST00000564791 KRT25Q7Z3Z0 450 aa12.87□□□□□ -0.35
SNX29-204ENST00000564791 CNKSR2Q8WXI2 1034 aa12.87□□□□□ -0.35
SNX29-204ENST00000564791 C12orf42Q96LP6 360 aa12.87□□□□□ -0.35
SNX29-204ENST00000564791 SLF1Q9BQI6 1058 aa12.87□□□□□ -0.35
SNX29-204ENST00000564791 RPAP3Q9H6T3 665 aaPredicted RBP12.87□□□□□ -0.35
SNX29-204ENST00000564791 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.87□□□□□ -0.35
SNX29-204ENST00000564791 TMEM260Q9NX78 707 aa12.87□□□□□ -0.35
SNX29-204ENST00000564791 TMEM63CQ9P1W3 806 aa12.87□□□□□ -0.35
SNX29-204ENST00000564791 BIN2Q9UBW5 565 aaPredicted RBP12.87□□□□□ -0.35
SNX29-204ENST00000564791 LOC285556D6RIA3 1793 aa12.87□□□□□ -0.35
SNX29-204ENST00000564791 MYH7BA7E2Y1 1941 aa12.86□□□□□ -0.35
SNX29-204ENST00000564791 DCAF8L1A6NGE4 600 aa12.86□□□□□ -0.35
SNX29-204ENST00000564791 C19orf81C9J6K1 198 aa12.86□□□□□ -0.35
SNX29-204ENST00000564791 TRAF5O00463 557 aa12.86□□□□□ -0.35
SNX29-204ENST00000564791 LIG1P18858 919 aa12.86□□□□□ -0.35
SNX29-204ENST00000564791 TRAPPC10P48553 1259 aa12.86□□□□□ -0.35
SNX29-204ENST00000564791 MAP3K11Q16584 847 aa12.86□□□□□ -0.35
SNX29-204ENST00000564791 UBE2SQ16763 222 aa12.86□□□□□ -0.35
SNX29-204ENST00000564791 INF2Q27J81 1249 aa12.86□□□□□ -0.35
SNX29-204ENST00000564791 CUL5Q93034 780 aa12.86□□□□□ -0.35
SNX29-204ENST00000564791 CLMNQ96JQ2 1002 aa12.86□□□□□ -0.35
SNX29-204ENST00000564791 PSTPIP2Q9H939 334 aa12.86□□□□□ -0.35
SNX29-204ENST00000564791 ELP3Q9H9T3 547 aa12.86□□□□□ -0.35
SNX29-204ENST00000564791 COL11A1P12107 1806 aaPredicted RBP12.86□□□□□ -0.35
SNX29-204ENST00000564791 PPP6R2O75170 966 aa12.85□□□□□ -0.35
SNX29-204ENST00000564791 FLOT1O75955 427 aa12.85□□□□□ -0.35
SNX29-204ENST00000564791 CLK2P49760 499 aaKnown RBP12.85□□□□□ -0.35
SNX29-204ENST00000564791 FMR1Q06787 632 aaKnown RBP eCLIP12.85□□□□□ -0.35
SNX29-204ENST00000564791 NONOQ15233 471 aaKnown RBP eCLIP12.85□□□□□ -0.35
SNX29-204ENST00000564791 ZNF174Q15697 407 aa12.85□□□□□ -0.35
SNX29-204ENST00000564791 AXDND1Q5T1B0 1012 aaPredicted RBP12.85□□□□□ -0.35
SNX29-204ENST00000564791 ANKRD13AQ8IZ07 590 aa12.85□□□□□ -0.35
SNX29-204ENST00000564791 JMYQ8N9B5 988 aa12.85□□□□□ -0.35
SNX29-204ENST00000564791 PRPF38AQ8NAV1 312 aaKnown RBP12.85□□□□□ -0.35
SNX29-204ENST00000564791 GOLPH3LQ9H4A5 285 aa12.85□□□□□ -0.35
SNX29-204ENST00000564791 NMRK2Q9NPI5 230 aa12.85□□□□□ -0.35
SNX29-204ENST00000564791 CEP131Q9UPN4 1083 aa12.85□□□□□ -0.35
SNX29-204ENST00000564791 RBBP6Q7Z6E9 1792 aaKnown RBP12.84□□□□□ -0.35
SNX29-204ENST00000564791 MRPL12P52815 198 aaKnown RBP12.84□□□□□ -0.35
SNX29-204ENST00000564791 ADALQ6DHV7 355 aa12.84□□□□□ -0.35
SNX29-204ENST00000564791 ARMC9Q7Z3E5 817 aa12.84□□□□□ -0.35
SNX29-204ENST00000564791 LDHDQ86WU2 507 aa12.84□□□□□ -0.35
SNX29-204ENST00000564791 CCAR1Q8IX12 1150 aaKnown RBP12.84□□□□□ -0.35
SNX29-204ENST00000564791 GLT8D2Q9H1C3 349 aa12.84□□□□□ -0.35
SNX29-204ENST00000564791 ZNF408Q9H9D4 720 aa12.84□□□□□ -0.35
SNX29-204ENST00000564791 TMOD4Q9NZQ9 345 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms