RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 VPS53Q5VIR6 699 aa21.9■■□□□ 1.1
CLN6-204ENST00000564752 FAM160B2Q86V87 743 aa21.9■■□□□ 1.1
CLN6-204ENST00000564752 KLHDC9Q8NEP7 349 aa21.9■■□□□ 1.1
CLN6-204ENST00000564752 BADQ92934 168 aa21.9■■□□□ 1.1
CLN6-204ENST00000564752 HELLSQ9NRZ9 838 aa21.9■■□□□ 1.1
CLN6-204ENST00000564752 ZHX1Q9UKY1 873 aaPredicted RBP21.9■■□□□ 1.1
CLN6-204ENST00000564752 MYH4Q9Y623 1939 aa21.89■■□□□ 1.09
CLN6-204ENST00000564752 TSPY2A6NKD2 308 aa21.89■■□□□ 1.09
CLN6-204ENST00000564752 PLA2G6O60733 806 aa21.89■■□□□ 1.09
CLN6-204ENST00000564752 DUSP11O75319 330 aaKnown RBP21.89■■□□□ 1.09
CLN6-204ENST00000564752 IRX6P78412 446 aaPredicted RBP21.89■■□□□ 1.09
CLN6-204ENST00000564752 ACVR2BQ13705 512 aa21.89■■□□□ 1.09
CLN6-204ENST00000564752 ALX1Q15699 326 aa21.89■■□□□ 1.09
CLN6-204ENST00000564752 FAM109BQ6ICB4 259 aaPredicted RBP21.89■■□□□ 1.09
CLN6-204ENST00000564752 CCSAPQ6IQ19 270 aaPredicted RBP21.89■■□□□ 1.09
CLN6-204ENST00000564752 ABHD16BQ9H3Z7 469 aa21.89■■□□□ 1.09
CLN6-204ENST00000564752 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.89■■□□□ 1.09
CLN6-204ENST00000564752 STX8Q9UNK0 236 aa21.89■■□□□ 1.09
CLN6-204ENST00000564752 ZNF536O15090 1300 aa21.88■■□□□ 1.09
CLN6-204ENST00000564752 SYNRGQ9UMZ2 1314 aa21.88■■□□□ 1.09
CLN6-204ENST00000564752 NMT2O60551 498 aa21.88■■□□□ 1.09
CLN6-204ENST00000564752 FGRP09769 529 aa21.88■■□□□ 1.09
CLN6-204ENST00000564752 NOVP48745 357 aa21.88■■□□□ 1.09
CLN6-204ENST00000564752 ACLYP53396 1101 aa21.88■■□□□ 1.09
CLN6-204ENST00000564752 SHHQ15465 462 aa21.88■■□□□ 1.09
CLN6-204ENST00000564752 RCSD1Q6JBY9 416 aa21.88■■□□□ 1.09
CLN6-204ENST00000564752 PLEKHM2Q8IWE5 1019 aa21.88■■□□□ 1.09
CLN6-204ENST00000564752 RILPL2Q969X0 211 aa21.88■■□□□ 1.09
CLN6-204ENST00000564752 AGBL1Q96MI9 1066 aa21.88■■□□□ 1.09
CLN6-204ENST00000564752 HOMER2Q9NSB8 354 aa21.88■■□□□ 1.09
CLN6-204ENST00000564752 ISY1Q9ULR0 285 aaKnown RBP21.88■■□□□ 1.09
CLN6-204ENST00000564752 STXBP5LQ9Y2K9 1186 aa21.88■■□□□ 1.09
CLN6-204ENST00000564752 PLXNA1Q9UIW2 1896 aa21.88■■□□□ 1.09
CLN6-204ENST00000564752 MOXD2PA6NHM9 499 aa21.87■■□□□ 1.09
CLN6-204ENST00000564752 ORC4O43929 436 aa21.87■■□□□ 1.09
CLN6-204ENST00000564752 CLTBP09497 229 aa21.87■■□□□ 1.09
CLN6-204ENST00000564752 CNTN2Q02246 1040 aa21.87■■□□□ 1.09
CLN6-204ENST00000564752 IKQ13123 557 aaPredicted RBP21.87■■□□□ 1.09
CLN6-204ENST00000564752 KCNA10Q16322 511 aa21.87■■□□□ 1.09
CLN6-204ENST00000564752 ARMCX2Q7L311 632 aa21.87■■□□□ 1.09
CLN6-204ENST00000564752 TICAM2Q86XR7 235 aa21.87■■□□□ 1.09
CLN6-204ENST00000564752 CHMP4CQ96CF2 233 aa21.87■■□□□ 1.09
CLN6-204ENST00000564752 OSBPL3Q9H4L5 887 aa21.87■■□□□ 1.09
CLN6-204ENST00000564752 ACAD9Q9H845 621 aa21.87■■□□□ 1.09
CLN6-204ENST00000564752 A0A0D9SFI3 127 aa21.86■■□□□ 1.09
CLN6-204ENST00000564752 RANBP6O60518 1105 aaKnown RBP21.86■■□□□ 1.09
CLN6-204ENST00000564752 ITGB8P26012 769 aa21.86■■□□□ 1.09
CLN6-204ENST00000564752 TKFCQ3LXA3 575 aa21.86■■□□□ 1.09
CLN6-204ENST00000564752 CCDC144BQ3MJ40 725 aa21.86■■□□□ 1.09
CLN6-204ENST00000564752 MCMDC2Q4G0Z9 681 aa21.86■■□□□ 1.09
CLN6-204ENST00000564752 C9orf50Q5SZB4 431 aa21.86■■□□□ 1.09
CLN6-204ENST00000564752 KCTD1Q719H9 257 aa21.86■■□□□ 1.09
CLN6-204ENST00000564752 ANKRD33Q7Z3H0 272 aa21.86■■□□□ 1.09
CLN6-204ENST00000564752 FAM133AQ8N9E0 248 aa21.86■■□□□ 1.09
CLN6-204ENST00000564752 NUP133Q8WUM0 1156 aa21.86■■□□□ 1.09
CLN6-204ENST00000564752 FAM227BQ96M60 508 aa21.86■■□□□ 1.09
CLN6-204ENST00000564752 TOX2Q96NM4 488 aa21.86■■□□□ 1.09
CLN6-204ENST00000564752 STARD7Q9NQZ5 370 aa21.86■■□□□ 1.09
CLN6-204ENST00000564752 MYADML2A6NDP7 307 aa21.85■■□□□ 1.09
CLN6-204ENST00000564752 KIAA0355O15063 1070 aa21.85■■□□□ 1.09
CLN6-204ENST00000564752 ADCY6O43306 1168 aa21.85■■□□□ 1.09
CLN6-204ENST00000564752 PQBP1O60828 265 aaKnown RBP21.85■■□□□ 1.09
CLN6-204ENST00000564752 FGAP02671 866 aa21.85■■□□□ 1.09
CLN6-204ENST00000564752 CST5P28325 142 aaPredicted RBP21.85■■□□□ 1.09
CLN6-204ENST00000564752 CCDC144CPQ8IYA2 1237 aa21.85■■□□□ 1.09
CLN6-204ENST00000564752 KATNBL1Q9H079 304 aa21.85■■□□□ 1.09
CLN6-204ENST00000564752 A1CFQ9NQ94 594 aaKnown RBP21.85■■□□□ 1.09
CLN6-204ENST00000564752 RNF146Q9NTX7 359 aa21.85■■□□□ 1.09
CLN6-204ENST00000564752 GJA9P57773 515 aa21.84■■□□□ 1.09
CLN6-204ENST00000564752 NMIQ13287 307 aaPredicted RBP21.84■■□□□ 1.09
CLN6-204ENST00000564752 TRERF1Q96PN7 1200 aa21.84■■□□□ 1.09
CLN6-204ENST00000564752 UPF3AQ9H1J1 476 aaKnown RBP21.84■■□□□ 1.09
CLN6-204ENST00000564752 PRR12Q9ULL5 1215 aa21.84■■□□□ 1.09
CLN6-204ENST00000564752 LTBP2Q14767 1821 aa21.83■■□□□ 1.09
CLN6-204ENST00000564752 SOWAHBA6NEL2 793 aa21.83■■□□□ 1.09
CLN6-204ENST00000564752 C6orf222P0C671 652 aaPredicted RBP21.83■■□□□ 1.09
CLN6-204ENST00000564752 ALAS1P13196 640 aa21.83■■□□□ 1.09
CLN6-204ENST00000564752 SNAP25P60880 206 aa21.83■■□□□ 1.09
CLN6-204ENST00000564752 IRX5P78411 483 aaPredicted RBP21.83■■□□□ 1.09
CLN6-204ENST00000564752 FAAP100Q0VG06 881 aa21.83■■□□□ 1.09
CLN6-204ENST00000564752 CCDC174Q6PII3 467 aa21.83■■□□□ 1.09
CLN6-204ENST00000564752 RASGRP2Q7LDG7 609 aa21.83■■□□□ 1.09
CLN6-204ENST00000564752 PCSK9Q8NBP7 692 aaKnown RBP21.83■■□□□ 1.09
CLN6-204ENST00000564752 SPC25Q9HBM1 224 aa21.83■■□□□ 1.09
CLN6-204ENST00000564752 TMEM39AQ9NV64 488 aa21.83■■□□□ 1.09
CLN6-204ENST00000564752 ELP1O95163 1332 aa21.82■■□□□ 1.08
CLN6-204ENST00000564752 DCDC2CA8MYV0 355 aa21.82■■□□□ 1.08
CLN6-204ENST00000564752 HSPD1P10809 573 aaKnown RBP21.82■■□□□ 1.08
CLN6-204ENST00000564752 RAG1P15918 1043 aa21.82■■□□□ 1.08
CLN6-204ENST00000564752 DCAF4Q8WV16 495 aa21.82■■□□□ 1.08
CLN6-204ENST00000564752 GLT1D1Q96MS3 346 aa21.82■■□□□ 1.08
CLN6-204ENST00000564752 TCP11L1Q9NUJ3 509 aa21.82■■□□□ 1.08
CLN6-204ENST00000564752 CCDC171Q6TFL3 1326 aa21.81■■□□□ 1.08
CLN6-204ENST00000564752 ASB14A6NK59 587 aa21.81■■□□□ 1.08
CLN6-204ENST00000564752 ASGR1P07306 291 aa21.81■■□□□ 1.08
CLN6-204ENST00000564752 CDK7P50613 346 aa21.81■■□□□ 1.08
CLN6-204ENST00000564752 NKX3-2P78367 333 aa21.81■■□□□ 1.08
CLN6-204ENST00000564752 MUM1L1Q5H9M0 696 aa21.81■■□□□ 1.08
CLN6-204ENST00000564752 GNASQ5JWF2 1037 aa21.81■■□□□ 1.08
CLN6-204ENST00000564752 ZNF589Q86UQ0 364 aaPredicted RBP21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms