RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 LRCH3Q96II8 777 aa14.4□□□□□ -0.1
GTF3C1-204ENST00000564664 LNPKQ9C0E8 428 aa14.4□□□□□ -0.1
GTF3C1-204ENST00000564664 SPC25Q9HBM1 224 aa14.4□□□□□ -0.1
GTF3C1-204ENST00000564664 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.4□□□□□ -0.1
GTF3C1-204ENST00000564664 TACC3Q9Y6A5 838 aa14.4□□□□□ -0.1
GTF3C1-204ENST00000564664 PLXNA1Q9UIW2 1896 aa14.4□□□□□ -0.1
GTF3C1-204ENST00000564664 LAMA3Q16787 3333 aa14.4□□□□□ -0.11
GTF3C1-204ENST00000564664 ASB14A6NK59 587 aa14.39□□□□□ -0.11
GTF3C1-204ENST00000564664 ADAMTS4O75173 837 aa14.39□□□□□ -0.11
GTF3C1-204ENST00000564664 PGK1P00558 417 aa14.39□□□□□ -0.11
GTF3C1-204ENST00000564664 TOP1P11387 765 aaKnown RBP14.39□□□□□ -0.11
GTF3C1-204ENST00000564664 CHD1LQ86WJ1 897 aa14.39□□□□□ -0.11
GTF3C1-204ENST00000564664 PCSK9Q8NBP7 692 aaKnown RBP14.39□□□□□ -0.11
GTF3C1-204ENST00000564664 KLHDC9Q8NEP7 349 aa14.39□□□□□ -0.11
GTF3C1-204ENST00000564664 FERMT2Q96AC1 680 aa14.39□□□□□ -0.11
GTF3C1-204ENST00000564664 FAM227BQ96M60 508 aa14.39□□□□□ -0.11
GTF3C1-204ENST00000564664 TOX2Q96NM4 488 aa14.39□□□□□ -0.11
GTF3C1-204ENST00000564664 ISY1Q9ULR0 285 aaKnown RBP14.39□□□□□ -0.11
GTF3C1-204ENST00000564664 POTEB2H3BUK9 544 aa14.38□□□□□ -0.11
GTF3C1-204ENST00000564664 HIP1O00291 1037 aa14.38□□□□□ -0.11
GTF3C1-204ENST00000564664 CST5P28325 142 aaPredicted RBP14.38□□□□□ -0.11
GTF3C1-204ENST00000564664 NUCB1Q02818 461 aa14.38□□□□□ -0.11
GTF3C1-204ENST00000564664 TRIM60Q495X7 471 aa14.38□□□□□ -0.11
GTF3C1-204ENST00000564664 FAM109BQ6ICB4 259 aaPredicted RBP14.38□□□□□ -0.11
GTF3C1-204ENST00000564664 BTNL9Q6UXG8 535 aa14.38□□□□□ -0.11
GTF3C1-204ENST00000564664 FAM133AQ8N9E0 248 aa14.38□□□□□ -0.11
GTF3C1-204ENST00000564664 RILPL2Q969X0 211 aa14.38□□□□□ -0.11
GTF3C1-204ENST00000564664 TRERF1Q96PN7 1200 aa14.38□□□□□ -0.11
GTF3C1-204ENST00000564664 RNF41Q9H4P4 317 aaPredicted RBP14.38□□□□□ -0.11
GTF3C1-204ENST00000564664 INCENPQ9NQS7 918 aa14.38□□□□□ -0.11
GTF3C1-204ENST00000564664 ZHX1Q9UKY1 873 aaPredicted RBP14.38□□□□□ -0.11
GTF3C1-204ENST00000564664 PRR12Q9ULL5 1215 aa14.38□□□□□ -0.11
GTF3C1-204ENST00000564664 ZNF536O15090 1300 aa14.38□□□□□ -0.11
GTF3C1-204ENST00000564664 ELP1O95163 1332 aa14.38□□□□□ -0.11
GTF3C1-204ENST00000564664 CCDC171Q6TFL3 1326 aa14.38□□□□□ -0.11
GTF3C1-204ENST00000564664 LOC102724159A0A0B4J2E5 919 aa14.37□□□□□ -0.11
GTF3C1-204ENST00000564664 A0A0D9SFI3 127 aa14.37□□□□□ -0.11
GTF3C1-204ENST00000564664 A0A1W2PQ45 241 aaPredicted RBP14.37□□□□□ -0.11
GTF3C1-204ENST00000564664 A0A1W2PQY0 241 aa14.37□□□□□ -0.11
GTF3C1-204ENST00000564664 SDSP20132 328 aa14.37□□□□□ -0.11
GTF3C1-204ENST00000564664 ACLYP53396 1101 aa14.37□□□□□ -0.11
GTF3C1-204ENST00000564664 NKX3-2P78367 333 aa14.37□□□□□ -0.11
GTF3C1-204ENST00000564664 TLE2Q04725 743 aa14.37□□□□□ -0.11
GTF3C1-204ENST00000564664 NMIQ13287 307 aaPredicted RBP14.37□□□□□ -0.11
GTF3C1-204ENST00000564664 PWP2Q15269 919 aaKnown RBP14.37□□□□□ -0.11
GTF3C1-204ENST00000564664 CCDC178Q5BJE1 867 aa14.37□□□□□ -0.11
GTF3C1-204ENST00000564664 AKNAD1Q5T1N1 836 aa14.37□□□□□ -0.11
GTF3C1-204ENST00000564664 CCSAPQ6IQ19 270 aaPredicted RBP14.37□□□□□ -0.11
GTF3C1-204ENST00000564664 MFSD6Q6ZSS7 791 aa14.37□□□□□ -0.11
GTF3C1-204ENST00000564664 KCTD1Q719H9 257 aa14.37□□□□□ -0.11
GTF3C1-204ENST00000564664 ARMCX2Q7L311 632 aa14.37□□□□□ -0.11
GTF3C1-204ENST00000564664 ANKRD33Q7Z3H0 272 aa14.37□□□□□ -0.11
GTF3C1-204ENST00000564664 PLEKHM2Q8IWE5 1019 aa14.37□□□□□ -0.11
GTF3C1-204ENST00000564664 AGBL1Q96MI9 1066 aa14.37□□□□□ -0.11
GTF3C1-204ENST00000564664 TOMM22Q9NS69 142 aa14.37□□□□□ -0.11
GTF3C1-204ENST00000564664 RNF146Q9NTX7 359 aa14.37□□□□□ -0.11
GTF3C1-204ENST00000564664 KIAA0355O15063 1070 aa14.36□□□□□ -0.11
GTF3C1-204ENST00000564664 NMT2O60551 498 aa14.36□□□□□ -0.11
GTF3C1-204ENST00000564664 ICAM1P05362 532 aa14.36□□□□□ -0.11
GTF3C1-204ENST00000564664 GJA9P57773 515 aa14.36□□□□□ -0.11
GTF3C1-204ENST00000564664 KCNA10Q16322 511 aa14.36□□□□□ -0.11
GTF3C1-204ENST00000564664 CCDC144BQ3MJ40 725 aa14.36□□□□□ -0.11
GTF3C1-204ENST00000564664 B4GALNT3Q6L9W6 998 aa14.36□□□□□ -0.11
GTF3C1-204ENST00000564664 CCDC144CPQ8IYA2 1237 aa14.36□□□□□ -0.11
GTF3C1-204ENST00000564664 DEFB123Q8N688 67 aa14.36□□□□□ -0.11
GTF3C1-204ENST00000564664 FGD4Q96M96 766 aa14.36□□□□□ -0.11
GTF3C1-204ENST00000564664 TMEM47Q9BQJ4 181 aa14.36□□□□□ -0.11
GTF3C1-204ENST00000564664 SEZ6LQ9BYH1 1024 aa14.36□□□□□ -0.11
GTF3C1-204ENST00000564664 UPF3AQ9H1J1 476 aaKnown RBP14.36□□□□□ -0.11
GTF3C1-204ENST00000564664 RANBP17Q9H2T7 1088 aaKnown RBP14.36□□□□□ -0.11
GTF3C1-204ENST00000564664 A1CFQ9NQ94 594 aaKnown RBP14.36□□□□□ -0.11
GTF3C1-204ENST00000564664 PDLIM7Q9NR12 457 aa14.36□□□□□ -0.11
GTF3C1-204ENST00000564664 HOMER2Q9NSB8 354 aa14.36□□□□□ -0.11
GTF3C1-204ENST00000564664 MROH7Q68CQ1 1323 aa14.36□□□□□ -0.11
GTF3C1-204ENST00000564664 SYNRGQ9UMZ2 1314 aa14.36□□□□□ -0.11
GTF3C1-204ENST00000564664 DCDC2CA8MYV0 355 aa14.35□□□□□ -0.11
GTF3C1-204ENST00000564664 ZNF213O14771 459 aa14.35□□□□□ -0.11
GTF3C1-204ENST00000564664 IGHDP01880 384 aa14.35□□□□□ -0.11
GTF3C1-204ENST00000564664 CLTBP09497 229 aa14.35□□□□□ -0.11
GTF3C1-204ENST00000564664 ALAS1P13196 640 aa14.35□□□□□ -0.11
GTF3C1-204ENST00000564664 RRP12Q5JTH9 1297 aaKnown RBP14.35□□□□□ -0.11
GTF3C1-204ENST00000564664 IQSEC1Q6DN90 963 aa14.35□□□□□ -0.11
GTF3C1-204ENST00000564664 ZNF589Q86UQ0 364 aaPredicted RBP14.35□□□□□ -0.11
GTF3C1-204ENST00000564664 DGKHQ86XP1 1220 aa14.35□□□□□ -0.11
GTF3C1-204ENST00000564664 GLT1D1Q96MS3 346 aa14.35□□□□□ -0.11
GTF3C1-204ENST00000564664 YTHDC1Q96MU7 727 aaKnown RBP14.35□□□□□ -0.11
GTF3C1-204ENST00000564664 PRDM5Q9NQX1 630 aaPredicted RBP14.35□□□□□ -0.11
GTF3C1-204ENST00000564664 STARD7Q9NQZ5 370 aa14.35□□□□□ -0.11
GTF3C1-204ENST00000564664 Q9Y3F1 56 aa14.35□□□□□ -0.11
GTF3C1-204ENST00000564664 TRIM43BA6NCK2 446 aa14.34□□□□□ -0.11
GTF3C1-204ENST00000564664 C6orf222P0C671 652 aaPredicted RBP14.34□□□□□ -0.11
GTF3C1-204ENST00000564664 CNTN2Q02246 1040 aa14.34□□□□□ -0.11
GTF3C1-204ENST00000564664 TNFAIP2Q03169 654 aa14.34□□□□□ -0.11
GTF3C1-204ENST00000564664 CCDC96Q2M329 555 aa14.34□□□□□ -0.11
GTF3C1-204ENST00000564664 GNASQ5JWF2 1037 aa14.34□□□□□ -0.11
GTF3C1-204ENST00000564664 SYDE2Q5VT97 1194 aa14.34□□□□□ -0.11
GTF3C1-204ENST00000564664 CCDC174Q6PII3 467 aa14.34□□□□□ -0.11
GTF3C1-204ENST00000564664 MORC4Q8TE76 937 aa14.34□□□□□ -0.11
GTF3C1-204ENST00000564664 ESR2Q92731 530 aa14.34□□□□□ -0.11
GTF3C1-204ENST00000564664 BADQ92934 168 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms