RNA–Protein interactions for RNA: ENST00000564557.1

CNOT1-206, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-206ENST00000564557 TKFCQ3LXA3 575 aa16.01■□□□□ 0.15
CNOT1-206ENST00000564557 GPATCH4Q5T3I0 446 aaKnown RBP16.01■□□□□ 0.15
CNOT1-206ENST00000564557 SYDE2Q5VT97 1194 aa16.01■□□□□ 0.15
CNOT1-206ENST00000564557 OLFML2BQ68BL8 750 aa16.01■□□□□ 0.15
CNOT1-206ENST00000564557 HOMER2Q9NSB8 354 aa16.01■□□□□ 0.15
CNOT1-206ENST00000564557 E7EWF7 191 aa16■□□□□ 0.15
CNOT1-206ENST00000564557 IFIT3O14879 490 aaKnown RBP16■□□□□ 0.15
CNOT1-206ENST00000564557 FARP2O94887 1054 aaPredicted RBP16■□□□□ 0.15
CNOT1-206ENST00000564557 PGK2P07205 417 aa16■□□□□ 0.15
CNOT1-206ENST00000564557 ALAS1P13196 640 aa16■□□□□ 0.15
CNOT1-206ENST00000564557 CYP2C19P33261 490 aa16■□□□□ 0.15
CNOT1-206ENST00000564557 SLC16A2P36021 539 aa16■□□□□ 0.15
CNOT1-206ENST00000564557 MNX1P50219 401 aaPredicted RBP16■□□□□ 0.15
CNOT1-206ENST00000564557 MAP3K21Q5TCX8 1036 aa16■□□□□ 0.15
CNOT1-206ENST00000564557 TTBK2Q6IQ55 1244 aa16■□□□□ 0.15
CNOT1-206ENST00000564557 RASGRP2Q7LDG7 609 aa16■□□□□ 0.15
CNOT1-206ENST00000564557 ENAHQ8N8S7 591 aaPredicted RBP16■□□□□ 0.15
CNOT1-206ENST00000564557 ANKS1AQ92625 1134 aa16■□□□□ 0.15
CNOT1-206ENST00000564557 ACAD9Q9H845 621 aa16■□□□□ 0.15
CNOT1-206ENST00000564557 FLRT1Q9NZU1 646 aa16■□□□□ 0.15
CNOT1-206ENST00000564557 PNMA2Q9UL42 364 aa16■□□□□ 0.15
CNOT1-206ENST00000564557 CCPG1Q9ULG6 757 aa16■□□□□ 0.15
CNOT1-206ENST00000564557 RIPK3Q9Y572 518 aa16■□□□□ 0.15
CNOT1-206ENST00000564557 HAX1O00165 279 aa15.99■□□□□ 0.15
CNOT1-206ENST00000564557 DHX16O60231 1041 aaKnown RBP15.99■□□□□ 0.15
CNOT1-206ENST00000564557 MSCO60682 206 aa15.99■□□□□ 0.15
CNOT1-206ENST00000564557 CCND3P30281 292 aaPredicted RBP15.99■□□□□ 0.15
CNOT1-206ENST00000564557 SNAP25P60880 206 aa15.99■□□□□ 0.15
CNOT1-206ENST00000564557 ZNF543Q08ER8 600 aa15.99■□□□□ 0.15
CNOT1-206ENST00000564557 RNF20Q5VTR2 975 aa15.99■□□□□ 0.15
CNOT1-206ENST00000564557 BTNL9Q6UXG8 535 aa15.99■□□□□ 0.15
CNOT1-206ENST00000564557 PLCD3Q8N3E9 789 aa15.99■□□□□ 0.15
CNOT1-206ENST00000564557 SHISA4Q96DD7 197 aa15.99■□□□□ 0.15
CNOT1-206ENST00000564557 MAML3Q96JK9 1138 aa15.99■□□□□ 0.15
CNOT1-206ENST00000564557 AGBL1Q96MI9 1066 aa15.99■□□□□ 0.15
CNOT1-206ENST00000564557 TRERF1Q96PN7 1200 aa15.99■□□□□ 0.15
CNOT1-206ENST00000564557 HTATIP2Q9BUP3 242 aa15.99■□□□□ 0.15
CNOT1-206ENST00000564557 RNF146Q9NTX7 359 aa15.99■□□□□ 0.15
CNOT1-206ENST00000564557 DIS3Q9Y2L1 958 aaKnown RBP15.99■□□□□ 0.15
CNOT1-206ENST00000564557 ZNFX1Q9P2E3 1918 aaKnown RBP15.98■□□□□ 0.15
CNOT1-206ENST00000564557 HTTP42858 3142 aa15.98■□□□□ 0.15
CNOT1-206ENST00000564557 PARP1P09874 1014 aaKnown RBP15.98■□□□□ 0.15
CNOT1-206ENST00000564557 GOLGA8HP0CJ92 632 aa15.98■□□□□ 0.15
CNOT1-206ENST00000564557 LSG1Q9H089 658 aaKnown RBP15.98■□□□□ 0.15
CNOT1-206ENST00000564557 ZNF236Q9UL36 1845 aa15.97■□□□□ 0.15
CNOT1-206ENST00000564557 ICAM1P05362 532 aa15.97■□□□□ 0.15
CNOT1-206ENST00000564557 SNHG28P0DPA3 235 aa15.97■□□□□ 0.15
CNOT1-206ENST00000564557 WTAPQ15007 396 aa15.97■□□□□ 0.15
CNOT1-206ENST00000564557 ZNF792Q3KQV3 632 aa15.97■□□□□ 0.15
CNOT1-206ENST00000564557 ASPRV1Q53RT3 343 aa15.97■□□□□ 0.15
CNOT1-206ENST00000564557 CYB5R4Q7L1T6 521 aa15.97■□□□□ 0.15
CNOT1-206ENST00000564557 NECAB2Q7Z6G3 386 aa15.97■□□□□ 0.15
CNOT1-206ENST00000564557 ANKLE1Q8NAG6 615 aa15.97■□□□□ 0.15
CNOT1-206ENST00000564557 DPF3Q92784 378 aa15.97■□□□□ 0.15
CNOT1-206ENST00000564557 TINF2Q9BSI4 451 aa15.97■□□□□ 0.15
CNOT1-206ENST00000564557 CRISPLD2Q9H0B8 497 aa15.97■□□□□ 0.15
CNOT1-206ENST00000564557 RANBP17Q9H2T7 1088 aaKnown RBP15.97■□□□□ 0.15
CNOT1-206ENST00000564557 CNPY2Q9Y2B0 182 aa15.97■□□□□ 0.15
CNOT1-206ENST00000564557 CENPFP49454 3210 aa15.97■□□□□ 0.15
CNOT1-206ENST00000564557 POTEB2H3BUK9 544 aa15.96■□□□□ 0.15
CNOT1-206ENST00000564557 TMEM67Q5HYA8 995 aa15.96■□□□□ 0.15
CNOT1-206ENST00000564557 CREB3L3Q68CJ9 461 aa15.96■□□□□ 0.15
CNOT1-206ENST00000564557 MSL3Q8N5Y2 521 aaKnown RBP15.96■□□□□ 0.15
CNOT1-206ENST00000564557 UBA5Q9GZZ9 404 aa15.96■□□□□ 0.15
CNOT1-206ENST00000564557 DDX20Q9UHI6 824 aaKnown RBP15.96■□□□□ 0.15
CNOT1-206ENST00000564557 PFASO15067 1338 aa15.95■□□□□ 0.14
CNOT1-206ENST00000564557 ZNF536O15090 1300 aa15.95■□□□□ 0.14
CNOT1-206ENST00000564557 SLC27A2O14975 620 aa15.95■□□□□ 0.14
CNOT1-206ENST00000564557 MCM5P33992 734 aa15.95■□□□□ 0.14
CNOT1-206ENST00000564557 VASPP50552 380 aaPredicted RBP15.95■□□□□ 0.14
CNOT1-206ENST00000564557 PRAMEF19Q5SWL8 479 aa15.95■□□□□ 0.14
CNOT1-206ENST00000564557 NSMFQ6X4W1 530 aa15.95■□□□□ 0.14
CNOT1-206ENST00000564557 CHST3Q7LGC8 479 aa15.95■□□□□ 0.14
CNOT1-206ENST00000564557 CATIPQ7Z7H3 387 aa15.95■□□□□ 0.14
CNOT1-206ENST00000564557 PAWRQ96IZ0 340 aaKnown RBP15.95■□□□□ 0.14
CNOT1-206ENST00000564557 VAT1LQ9HCJ6 419 aa15.95■□□□□ 0.14
CNOT1-206ENST00000564557 NRBP1Q9UHY1 535 aa15.95■□□□□ 0.14
CNOT1-206ENST00000564557 OGDHLQ9ULD0 1010 aa15.95■□□□□ 0.14
CNOT1-206ENST00000564557 SEPT4O43236 478 aa15.94■□□□□ 0.14
CNOT1-206ENST00000564557 CYBAP13498 195 aa15.94■□□□□ 0.14
CNOT1-206ENST00000564557 NECTIN1Q15223 517 aa15.94■□□□□ 0.14
CNOT1-206ENST00000564557 SEC23AQ15436 765 aa15.94■□□□□ 0.14
CNOT1-206ENST00000564557 NFXL1Q6ZNB6 911 aa15.94■□□□□ 0.14
CNOT1-206ENST00000564557 STOX1Q6ZVD7 989 aa15.94■□□□□ 0.14
CNOT1-206ENST00000564557 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.94■□□□□ 0.14
CNOT1-206ENST00000564557 TMTC2Q8N394 836 aa15.94■□□□□ 0.14
CNOT1-206ENST00000564557 DNAJC25-GNG10A0A024R161 153 aa15.93■□□□□ 0.14
CNOT1-206ENST00000564557 PTPDC1A2A3K4 754 aa15.93■□□□□ 0.14
CNOT1-206ENST00000564557 ZNF467Q7Z7K2 595 aaPredicted RBP15.93■□□□□ 0.14
CNOT1-206ENST00000564557 ARRDC4Q8NCT1 418 aa15.93■□□□□ 0.14
CNOT1-206ENST00000564557 A1CFQ9NQ94 594 aaKnown RBP15.93■□□□□ 0.14
CNOT1-206ENST00000564557 TAF6LQ9Y6J9 622 aa15.93■□□□□ 0.14
CNOT1-206ENST00000564557 PLXNA1Q9UIW2 1896 aa15.93■□□□□ 0.14
CNOT1-206ENST00000564557 SYNGAP1Q96PV0 1343 aa15.93■□□□□ 0.14
CNOT1-206ENST00000564557 CCDC69A6NI79 296 aa15.92■□□□□ 0.14
CNOT1-206ENST00000564557 ASB14A6NK59 587 aa15.92■□□□□ 0.14
CNOT1-206ENST00000564557 KLRF2D3W0D1 207 aa15.92■□□□□ 0.14
CNOT1-206ENST00000564557 PRC1O43663 620 aa15.92■□□□□ 0.14
CNOT1-206ENST00000564557 REC8O95072 547 aa15.92■□□□□ 0.14
CNOT1-206ENST00000564557 RARBP10826 455 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms