RNA–Protein interactions for RNA: ENST00000563753.1

NPTN-206, Transcript of neuroplastin, humanhuman

TSL 2

Gene NPTN, Length 599 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPTN-206ENST00000563753 TNFRSF10AO00220 468 aa18.25■□□□□ 0.51
NPTN-206ENST00000563753 ZNF365Q70YC5 407 aa18.25■□□□□ 0.51
NPTN-206ENST00000563753 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.25■□□□□ 0.51
NPTN-206ENST00000563753 ARMCX2Q7L311 632 aa18.25■□□□□ 0.51
NPTN-206ENST00000563753 ZNF444Q8N0Y2 327 aaPredicted RBP18.25■□□□□ 0.51
NPTN-206ENST00000563753 PRDM12Q9H4Q4 367 aa18.25■□□□□ 0.51
NPTN-206ENST00000563753 FEM1BQ9UK73 627 aa18.25■□□□□ 0.51
NPTN-206ENST00000563753 IGKV6D-41A0A0C4DH26 115 aa18.24■□□□□ 0.51
NPTN-206ENST00000563753 OAZ1P54368 228 aa18.24■□□□□ 0.51
NPTN-206ENST00000563753 AKNAD1Q5T1N1 836 aa18.24■□□□□ 0.51
NPTN-206ENST00000563753 CCDC144CPQ8IYA2 1237 aa18.24■□□□□ 0.51
NPTN-206ENST00000563753 ATXN2LQ8WWM7 1075 aaKnown RBP18.24■□□□□ 0.51
NPTN-206ENST00000563753 MKL1Q969V6 931 aa18.24■□□□□ 0.51
NPTN-206ENST00000563753 LRRCC1Q9C099 1032 aa18.24■□□□□ 0.51
NPTN-206ENST00000563753 CHMP4BQ9H444 224 aaKnown RBP18.24■□□□□ 0.51
NPTN-206ENST00000563753 ZNF287Q9HBT7 754 aa18.24■□□□□ 0.51
NPTN-206ENST00000563753 CTAGE5O15320 804 aa18.23■□□□□ 0.51
NPTN-206ENST00000563753 NKX3-2P78367 333 aa18.23■□□□□ 0.51
NPTN-206ENST00000563753 RAB30Q15771 203 aa18.23■□□□□ 0.51
NPTN-206ENST00000563753 NOL8Q76FK4 1167 aaKnown RBP18.23■□□□□ 0.51
NPTN-206ENST00000563753 LRRC47Q8N1G4 583 aaKnown RBP18.23■□□□□ 0.51
NPTN-206ENST00000563753 CEP95Q96GE4 821 aa18.23■□□□□ 0.51
NPTN-206ENST00000563753 KATNBL1Q9H079 304 aa18.23■□□□□ 0.51
NPTN-206ENST00000563753 ECHDC1Q9NTX5 307 aa18.23■□□□□ 0.51
NPTN-206ENST00000563753 MTMR4Q9NYA4 1195 aa18.23■□□□□ 0.51
NPTN-206ENST00000563753 PARP14Q460N5 1801 aa18.23■□□□□ 0.51
NPTN-206ENST00000563753 TTC28Q96AY4 2481 aa18.22■□□□□ 0.51
NPTN-206ENST00000563753 PRDM1O75626 825 aa18.22■□□□□ 0.51
NPTN-206ENST00000563753 CYP2C18P33260 490 aa18.22■□□□□ 0.51
NPTN-206ENST00000563753 BEX3Q00994 111 aa18.22■□□□□ 0.51
NPTN-206ENST00000563753 TNFAIP2Q03169 654 aa18.22■□□□□ 0.51
NPTN-206ENST00000563753 SLFN13Q68D06 897 aa18.22■□□□□ 0.51
NPTN-206ENST00000563753 GMCL1P1Q8NEA9 526 aa18.22■□□□□ 0.51
NPTN-206ENST00000563753 HERVK_113Q902F9 699 aa18.22■□□□□ 0.51
NPTN-206ENST00000563753 APPBP2Q92624 585 aa18.22■□□□□ 0.51
NPTN-206ENST00000563753 OSBP2Q969R2 916 aa18.22■□□□□ 0.51
NPTN-206ENST00000563753 MTIF3Q9H2K0 278 aaKnown RBP18.22■□□□□ 0.51
NPTN-206ENST00000563753 IL23AQ9NPF7 189 aa18.22■□□□□ 0.51
NPTN-206ENST00000563753 HOMER2Q9NSB8 354 aa18.22■□□□□ 0.51
NPTN-206ENST00000563753 MSRAQ9UJ68 235 aa18.22■□□□□ 0.51
NPTN-206ENST00000563753 SYNPO2Q9UMS6 1093 aa18.22■□□□□ 0.51
NPTN-206ENST00000563753 ZNFX1Q9P2E3 1918 aaKnown RBP18.21■□□□□ 0.51
NPTN-206ENST00000563753 BAZ2AQ9UIF9 1905 aaKnown RBP18.21■□□□□ 0.51
NPTN-206ENST00000563753 COL11A1P12107 1806 aaPredicted RBP18.21■□□□□ 0.51
NPTN-206ENST00000563753 SMARCA5O60264 1052 aaPredicted RBP18.21■□□□□ 0.51
NPTN-206ENST00000563753 TTLL1O95922 423 aa18.21■□□□□ 0.51
NPTN-206ENST00000563753 CD4P01730 458 aa18.21■□□□□ 0.51
NPTN-206ENST00000563753 APPP05067 770 aa18.21■□□□□ 0.51
NPTN-206ENST00000563753 FDX1P10109 184 aa18.21■□□□□ 0.51
NPTN-206ENST00000563753 BMP3P12645 472 aa18.21■□□□□ 0.51
NPTN-206ENST00000563753 TDO2P48775 406 aa18.21■□□□□ 0.51
NPTN-206ENST00000563753 CNTN2Q02246 1040 aa18.21■□□□□ 0.51
NPTN-206ENST00000563753 CXCL17Q6UXB2 119 aa18.21■□□□□ 0.51
NPTN-206ENST00000563753 FAM133AQ8N9E0 248 aa18.21■□□□□ 0.51
NPTN-206ENST00000563753 KBTBD3Q8NAB2 608 aa18.21■□□□□ 0.51
NPTN-206ENST00000563753 ASB2Q96Q27 587 aa18.21■□□□□ 0.51
NPTN-206ENST00000563753 CXXC1Q9P0U4 656 aaPredicted RBP18.21■□□□□ 0.51
NPTN-206ENST00000563753 THEGQ9P2T0 379 aa18.21■□□□□ 0.51
NPTN-206ENST00000563753 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.2■□□□□ 0.5
NPTN-206ENST00000563753 RNF113AO15541 343 aaKnown RBP18.2■□□□□ 0.5
NPTN-206ENST00000563753 CABYRO75952 493 aa18.2■□□□□ 0.5
NPTN-206ENST00000563753 FGBP02675 491 aa18.2■□□□□ 0.5
NPTN-206ENST00000563753 COL9A1P20849 921 aa18.2■□□□□ 0.5
NPTN-206ENST00000563753 IGFBP4P22692 258 aa18.2■□□□□ 0.5
NPTN-206ENST00000563753 ADGRE1Q14246 886 aa18.2■□□□□ 0.5
NPTN-206ENST00000563753 CCDC85BQ15834 202 aaPredicted RBP18.2■□□□□ 0.5
NPTN-206ENST00000563753 SLC43A3Q8NBI5 491 aa18.2■□□□□ 0.5
NPTN-206ENST00000563753 HIPK3Q9H422 1215 aa18.2■□□□□ 0.5
NPTN-206ENST00000563753 ACAD9Q9H845 621 aa18.2■□□□□ 0.5
NPTN-206ENST00000563753 EPB41L4AQ9HCS5 686 aaPredicted RBP18.2■□□□□ 0.5
NPTN-206ENST00000563753 ISY1Q9ULR0 285 aaKnown RBP18.2■□□□□ 0.5
NPTN-206ENST00000563753 TMEM232C9JQI7 657 aa18.19■□□□□ 0.5
NPTN-206ENST00000563753 GPAA1O43292 621 aa18.19■□□□□ 0.5
NPTN-206ENST00000563753 GNAT2P19087 354 aa18.19■□□□□ 0.5
NPTN-206ENST00000563753 FSCN1Q16658 493 aaKnown RBP18.19■□□□□ 0.5
NPTN-206ENST00000563753 AP5M1Q9H0R1 490 aa18.19■□□□□ 0.5
NPTN-206ENST00000563753 NKX2-4Q9H2Z4 354 aa18.19■□□□□ 0.5
NPTN-206ENST00000563753 SLC28A3Q9HAS3 691 aa18.19■□□□□ 0.5
NPTN-206ENST00000563753 A1CFQ9NQ94 594 aaKnown RBP18.19■□□□□ 0.5
NPTN-206ENST00000563753 RNF146Q9NTX7 359 aa18.19■□□□□ 0.5
NPTN-206ENST00000563753 GNEQ9Y223 722 aaKnown RBP18.19■□□□□ 0.5
NPTN-206ENST00000563753 MYH8P13535 1937 aa18.19■□□□□ 0.5
NPTN-206ENST00000563753 ASTN1O14525 1302 aa18.19■□□□□ 0.5
NPTN-206ENST00000563753 PLXNA1Q9UIW2 1896 aa18.18■□□□□ 0.5
NPTN-206ENST00000563753 SOWAHBA6NEL2 793 aa18.18■□□□□ 0.5
NPTN-206ENST00000563753 ASB14A6NK59 587 aa18.18■□□□□ 0.5
NPTN-206ENST00000563753 DYNC1LI2O43237 492 aaPredicted RBP18.18■□□□□ 0.5
NPTN-206ENST00000563753 TSPY3P0CV98 308 aa18.18■□□□□ 0.5
NPTN-206ENST00000563753 TSPY8P0CW00 308 aa18.18■□□□□ 0.5
NPTN-206ENST00000563753 STAT2P52630 851 aa18.18■□□□□ 0.5
NPTN-206ENST00000563753 MRPS5P82675 430 aaKnown RBP18.18■□□□□ 0.5
NPTN-206ENST00000563753 ITGA7Q13683 1181 aa18.18■□□□□ 0.5
NPTN-206ENST00000563753 OTOP2Q7RTS6 562 aa18.18■□□□□ 0.5
NPTN-206ENST00000563753 TLK2Q86UE8 772 aa18.18■□□□□ 0.5
NPTN-206ENST00000563753 NEDD1Q8NHV4 660 aa18.18■□□□□ 0.5
NPTN-206ENST00000563753 ADAMTS19Q8TE59 1207 aa18.18■□□□□ 0.5
NPTN-206ENST00000563753 CHURC1Q8WUH1 139 aa18.18■□□□□ 0.5
NPTN-206ENST00000563753 AGBL1Q96MI9 1066 aa18.18■□□□□ 0.5
NPTN-206ENST00000563753 PATL2C9JE40 543 aaKnown RBP18.17■□□□□ 0.5
NPTN-206ENST00000563753 ZEB2O60315 1214 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms