RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 ZSCAN10Q96SZ4 725 aaPredicted RBP7.28□□□□□ -1.24
CNOT1-204ENST00000563130 NUP88Q99567 741 aaPredicted RBP7.28□□□□□ -1.24
CNOT1-204ENST00000563130 ZKSCAN3Q9BRR0 538 aa7.28□□□□□ -1.24
CNOT1-204ENST00000563130 BTBD7Q9P203 1132 aa7.28□□□□□ -1.24
CNOT1-204ENST00000563130 PPP1R9AQ9ULJ8 1098 aa7.28□□□□□ -1.24
CNOT1-204ENST00000563130 ZSWIM8A7E2V4 1837 aa7.28□□□□□ -1.24
CNOT1-204ENST00000563130 TNKSO95271 1327 aa7.28□□□□□ -1.24
CNOT1-204ENST00000563130 PLA2G6O60733 806 aa7.27□□□□□ -1.24
CNOT1-204ENST00000563130 BMP3P12645 472 aa7.27□□□□□ -1.24
CNOT1-204ENST00000563130 ANTXR2P58335 489 aa7.27□□□□□ -1.24
CNOT1-204ENST00000563130 TRDNQ13061 729 aa7.27□□□□□ -1.24
CNOT1-204ENST00000563130 COL9A3Q14050 684 aaPredicted RBP7.27□□□□□ -1.24
CNOT1-204ENST00000563130 KIF22Q14807 665 aa7.27□□□□□ -1.24
CNOT1-204ENST00000563130 ARHGEF6Q15052 776 aa7.27□□□□□ -1.24
CNOT1-204ENST00000563130 FBXO46Q6PJ61 603 aaPredicted RBP7.27□□□□□ -1.24
CNOT1-204ENST00000563130 RASGRP2Q7LDG7 609 aa7.27□□□□□ -1.24
CNOT1-204ENST00000563130 PRPF38AQ8NAV1 312 aaKnown RBP7.27□□□□□ -1.24
CNOT1-204ENST00000563130 REPS2Q8NFH8 660 aa7.27□□□□□ -1.24
CNOT1-204ENST00000563130 ATG4CQ96DT6 458 aa7.27□□□□□ -1.24
CNOT1-204ENST00000563130 SRRDQ9UH36 339 aa7.27□□□□□ -1.24
CNOT1-204ENST00000563130 PTPN22Q9Y2R2 807 aa7.27□□□□□ -1.24
CNOT1-204ENST00000563130 VWA5AO00534 786 aa7.27□□□□□ -1.25
CNOT1-204ENST00000563130 PDHBP11177 359 aa7.27□□□□□ -1.25
CNOT1-204ENST00000563130 MCCP23508 829 aa7.27□□□□□ -1.25
CNOT1-204ENST00000563130 HSPA4P34932 840 aa7.27□□□□□ -1.25
CNOT1-204ENST00000563130 SLC1A4P43007 532 aa7.27□□□□□ -1.25
CNOT1-204ENST00000563130 PRMT2P55345 433 aa7.27□□□□□ -1.25
CNOT1-204ENST00000563130 FCGRTP55899 365 aa7.27□□□□□ -1.25
CNOT1-204ENST00000563130 TNS4Q8IZW8 715 aa7.27□□□□□ -1.25
CNOT1-204ENST00000563130 SLF1Q9BQI6 1058 aa7.27□□□□□ -1.25
CNOT1-204ENST00000563130 MTA3Q9BTC8 594 aa7.27□□□□□ -1.25
CNOT1-204ENST00000563130 PORCNQ9H237 461 aa7.27□□□□□ -1.25
CNOT1-204ENST00000563130 FEM1BQ9UK73 627 aa7.27□□□□□ -1.25
CNOT1-204ENST00000563130 ZNF214Q9UL59 606 aaPredicted RBP7.27□□□□□ -1.25
CNOT1-204ENST00000563130 TNPO2O14787 897 aaKnown RBP7.26□□□□□ -1.25
CNOT1-204ENST00000563130 ATP2A1O14983 1001 aa7.26□□□□□ -1.25
CNOT1-204ENST00000563130 RAD21O60216 631 aa7.26□□□□□ -1.25
CNOT1-204ENST00000563130 REC8O95072 547 aa7.26□□□□□ -1.25
CNOT1-204ENST00000563130 FMNL1O95466 1100 aaPredicted RBP7.26□□□□□ -1.25
CNOT1-204ENST00000563130 PRSS12P56730 875 aa7.26□□□□□ -1.25
CNOT1-204ENST00000563130 TMEM132BQ14DG7 1078 aa7.26□□□□□ -1.25
CNOT1-204ENST00000563130 RNF20Q5VTR2 975 aa7.26□□□□□ -1.25
CNOT1-204ENST00000563130 BTNL9Q6UXG8 535 aa7.26□□□□□ -1.25
CNOT1-204ENST00000563130 RALYLQ86SE5 291 aaKnown RBP7.26□□□□□ -1.25
CNOT1-204ENST00000563130 IGDCC4Q8TDY8 1250 aa7.26□□□□□ -1.25
CNOT1-204ENST00000563130 DCAF4Q8WV16 495 aa7.26□□□□□ -1.25
CNOT1-204ENST00000563130 UBAC1Q9BSL1 405 aa7.26□□□□□ -1.25
CNOT1-204ENST00000563130 PAGR1Q9BTK6 254 aa7.26□□□□□ -1.25
CNOT1-204ENST00000563130 SPATC1LQ9H0A9 340 aa7.26□□□□□ -1.25
CNOT1-204ENST00000563130 NPDC1Q9NQX5 325 aaPredicted RBP7.26□□□□□ -1.25
CNOT1-204ENST00000563130 RBM27Q9P2N5 1060 aaKnown RBP7.26□□□□□ -1.25
CNOT1-204ENST00000563130 GJD2Q9UKL4 321 aa7.26□□□□□ -1.25
CNOT1-204ENST00000563130 TMEM232C9JQI7 657 aa7.26□□□□□ -1.25
CNOT1-204ENST00000563130 HOXD10P28358 340 aa7.26□□□□□ -1.25
CNOT1-204ENST00000563130 MAPK4P31152 587 aa7.26□□□□□ -1.25
CNOT1-204ENST00000563130 STAT2P52630 851 aa7.26□□□□□ -1.25
CNOT1-204ENST00000563130 CCNA1P78396 465 aa7.26□□□□□ -1.25
CNOT1-204ENST00000563130 PTGDRQ13258 359 aa7.26□□□□□ -1.25
CNOT1-204ENST00000563130 KCTD1Q719H9 257 aa7.26□□□□□ -1.25
CNOT1-204ENST00000563130 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.26□□□□□ -1.25
CNOT1-204ENST00000563130 FAM160B2Q86V87 743 aa7.26□□□□□ -1.25
CNOT1-204ENST00000563130 GPIHBP1Q8IV16 184 aa7.26□□□□□ -1.25
CNOT1-204ENST00000563130 PNMA1Q8ND90 353 aa7.26□□□□□ -1.25
CNOT1-204ENST00000563130 SHCBP1Q8NEM2 672 aa7.26□□□□□ -1.25
CNOT1-204ENST00000563130 MOV10L1Q9BXT6 1211 aaKnown RBP7.26□□□□□ -1.25
CNOT1-204ENST00000563130 SLC38A10Q9HBR0 1119 aa7.26□□□□□ -1.25
CNOT1-204ENST00000563130 MGAMO43451 1857 aa7.26□□□□□ -1.25
CNOT1-204ENST00000563130 FDX1P10109 184 aa7.25□□□□□ -1.25
CNOT1-204ENST00000563130 FLT3LGP49771 235 aa7.25□□□□□ -1.25
CNOT1-204ENST00000563130 PRKCZQ05513 592 aa7.25□□□□□ -1.25
CNOT1-204ENST00000563130 ZNF543Q08ER8 600 aa7.25□□□□□ -1.25
CNOT1-204ENST00000563130 IRF5Q13568 498 aa7.25□□□□□ -1.25
CNOT1-204ENST00000563130 PROX2Q3B8N5 592 aa7.25□□□□□ -1.25
CNOT1-204ENST00000563130 ADCK5Q3MIX3 580 aa7.25□□□□□ -1.25
CNOT1-204ENST00000563130 CHST3Q7LGC8 479 aa7.25□□□□□ -1.25
CNOT1-204ENST00000563130 GPR142Q7Z601 462 aa7.25□□□□□ -1.25
CNOT1-204ENST00000563130 RIOX2Q8IUF8 465 aa7.25□□□□□ -1.25
CNOT1-204ENST00000563130 CHURC1Q8WUH1 139 aa7.25□□□□□ -1.25
CNOT1-204ENST00000563130 USP6NLQ92738 828 aa7.25□□□□□ -1.25
CNOT1-204ENST00000563130 ABHD8Q96I13 439 aa7.25□□□□□ -1.25
CNOT1-204ENST00000563130 USP26Q9BXU7 913 aa7.25□□□□□ -1.25
CNOT1-204ENST00000563130 SENP2Q9HC62 589 aa7.25□□□□□ -1.25
CNOT1-204ENST00000563130 GABRQQ9UN88 632 aa7.25□□□□□ -1.25
CNOT1-204ENST00000563130 HPS5Q9UPZ3 1129 aa7.25□□□□□ -1.25
CNOT1-204ENST00000563130 PTCH2Q9Y6C5 1203 aa7.25□□□□□ -1.25
CNOT1-204ENST00000563130 CENPFP49454 3210 aa7.25□□□□□ -1.25
CNOT1-204ENST00000563130 ZNF536O15090 1300 aa7.25□□□□□ -1.25
CNOT1-204ENST00000563130 DOCK3Q8IZD9 2030 aa7.25□□□□□ -1.25
CNOT1-204ENST00000563130 IFIT3O14879 490 aaKnown RBP7.25□□□□□ -1.25
CNOT1-204ENST00000563130 ZKSCAN1P17029 563 aaPredicted RBP7.25□□□□□ -1.25
CNOT1-204ENST00000563130 MCM5P33992 734 aa7.25□□□□□ -1.25
CNOT1-204ENST00000563130 OAZ1P54368 228 aa7.25□□□□□ -1.25
CNOT1-204ENST00000563130 EXOSC10Q01780 885 aaKnown RBP7.25□□□□□ -1.25
CNOT1-204ENST00000563130 TROAPQ12815 778 aa7.25□□□□□ -1.25
CNOT1-204ENST00000563130 MORN1Q5T089 497 aa7.25□□□□□ -1.25
CNOT1-204ENST00000563130 GPATCH4Q5T3I0 446 aaKnown RBP7.25□□□□□ -1.25
CNOT1-204ENST00000563130 IFIT1BQ5T764 474 aaKnown RBP7.25□□□□□ -1.25
CNOT1-204ENST00000563130 TTBK2Q6IQ55 1244 aa7.25□□□□□ -1.25
CNOT1-204ENST00000563130 PACS2Q86VP3 889 aa7.25□□□□□ -1.25
CNOT1-204ENST00000563130 SPNS2Q8IVW8 549 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms