RNA–Protein interactions for RNA: ENST00000562775.1

SPG7-206, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best)

Gene SPG7, Length 1,595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-206ENST00000562775 TRAF1Q13077 416 aa16.09■□□□□ 0.17
SPG7-206ENST00000562775 VGLL4Q14135 290 aa16.09■□□□□ 0.17
SPG7-206ENST00000562775 PTPAQ15257 358 aa16.09■□□□□ 0.17
SPG7-206ENST00000562775 PIK3AP1Q6ZUJ8 805 aa16.09■□□□□ 0.17
SPG7-206ENST00000562775 AMNQ9BXJ7 453 aa16.09■□□□□ 0.17
SPG7-206ENST00000562775 EMILIN3Q9NT22 766 aa16.09■□□□□ 0.17
SPG7-206ENST00000562775 PCDHA6Q9UN73 950 aa16.09■□□□□ 0.17
SPG7-206ENST00000562775 PCDHA8Q9Y5H6 950 aa16.09■□□□□ 0.17
SPG7-206ENST00000562775 CSADQ9Y600 493 aa16.09■□□□□ 0.17
SPG7-206ENST00000562775 SNCAIPQ9Y6H5 919 aa16.09■□□□□ 0.17
SPG7-206ENST00000562775 FAM205CA6NFA0 338 aa16.09■□□□□ 0.17
SPG7-206ENST00000562775 ADCY7P51828 1080 aa16.09■□□□□ 0.17
SPG7-206ENST00000562775 FBXO11Q86XK2 927 aa16.09■□□□□ 0.17
SPG7-206ENST00000562775 C12orf42Q96LP6 360 aa16.09■□□□□ 0.17
SPG7-206ENST00000562775 PCDHA1Q9Y5I3 950 aa16.09■□□□□ 0.17
SPG7-206ENST00000562775 PHIPQ8WWQ0 1821 aa16.08■□□□□ 0.17
SPG7-206ENST00000562775 PAPPA2Q9BXP8 1791 aa16.08■□□□□ 0.17
SPG7-206ENST00000562775 CCDC194A0A1B0GVG4 234 aa16.08■□□□□ 0.16
SPG7-206ENST00000562775 TRIM75PA6NK02 468 aa16.08■□□□□ 0.16
SPG7-206ENST00000562775 PPP6R2O75170 966 aa16.08■□□□□ 0.16
SPG7-206ENST00000562775 ME1P48163 572 aa16.08■□□□□ 0.16
SPG7-206ENST00000562775 MRPL12P52815 198 aaKnown RBP16.08■□□□□ 0.16
SPG7-206ENST00000562775 MAP3K11Q16584 847 aa16.08■□□□□ 0.16
SPG7-206ENST00000562775 NOM1Q5C9Z4 860 aaKnown RBP16.08■□□□□ 0.16
SPG7-206ENST00000562775 KRT25Q7Z3Z0 450 aa16.08■□□□□ 0.16
SPG7-206ENST00000562775 ANKRD13AQ8IZ07 590 aa16.08■□□□□ 0.16
SPG7-206ENST00000562775 JMYQ8N9B5 988 aa16.08■□□□□ 0.16
SPG7-206ENST00000562775 RASGRP4Q8TDF6 673 aa16.08■□□□□ 0.16
SPG7-206ENST00000562775 GLT8D2Q9H1C3 349 aa16.08■□□□□ 0.16
SPG7-206ENST00000562775 RANBP17Q9H2T7 1088 aaKnown RBP16.08■□□□□ 0.16
SPG7-206ENST00000562775 RRAGCQ9HB90 399 aa16.08■□□□□ 0.16
SPG7-206ENST00000562775 RIC8AQ9NPQ8 531 aa16.08■□□□□ 0.16
SPG7-206ENST00000562775 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.08■□□□□ 0.16
SPG7-206ENST00000562775 CEP131Q9UPN4 1083 aa16.08■□□□□ 0.16
SPG7-206ENST00000562775 AFG3L2Q9Y4W6 797 aa16.08■□□□□ 0.16
SPG7-206ENST00000562775 PCDHB6Q9Y5E3 794 aa16.08■□□□□ 0.16
SPG7-206ENST00000562775 POTEIP0CG38 1075 aa16.07■□□□□ 0.16
SPG7-206ENST00000562775 POTEJP0CG39 1038 aa16.07■□□□□ 0.16
SPG7-206ENST00000562775 VCAM1P19320 739 aa16.07■□□□□ 0.16
SPG7-206ENST00000562775 SNAP25P60880 206 aa16.07■□□□□ 0.16
SPG7-206ENST00000562775 REXO1Q8N1G1 1221 aaKnown RBP16.07■□□□□ 0.16
SPG7-206ENST00000562775 PRPF38AQ8NAV1 312 aaKnown RBP16.07■□□□□ 0.16
SPG7-206ENST00000562775 RBM46Q8TBY0 533 aaKnown RBP16.07■□□□□ 0.16
SPG7-206ENST00000562775 CUL5Q93034 780 aa16.07■□□□□ 0.16
SPG7-206ENST00000562775 KIFC2Q96AC6 838 aa16.07■□□□□ 0.16
SPG7-206ENST00000562775 FBXO28Q9NVF7 368 aa16.07■□□□□ 0.16
SPG7-206ENST00000562775 PCDHA7Q9UN72 937 aa16.07■□□□□ 0.16
SPG7-206ENST00000562775 BMP15O95972 392 aa16.06■□□□□ 0.16
SPG7-206ENST00000562775 ATP2B1P20020 1258 aa16.06■□□□□ 0.16
SPG7-206ENST00000562775 TTLL12Q14166 644 aaPredicted RBP16.06■□□□□ 0.16
SPG7-206ENST00000562775 TPRNQ4KMQ1 711 aa16.06■□□□□ 0.16
SPG7-206ENST00000562775 SH3D19Q5HYK7 790 aa16.06■□□□□ 0.16
SPG7-206ENST00000562775 TTC38Q5R3I4 469 aa16.06■□□□□ 0.16
SPG7-206ENST00000562775 MAP1SQ66K74 1059 aaPredicted RBP16.06■□□□□ 0.16
SPG7-206ENST00000562775 ADALQ6DHV7 355 aa16.06■□□□□ 0.16
SPG7-206ENST00000562775 CAVIN1Q6NZI2 390 aaKnown RBP16.06■□□□□ 0.16
SPG7-206ENST00000562775 ARMC9Q7Z3E5 817 aa16.06■□□□□ 0.16
SPG7-206ENST00000562775 SLF1Q9BQI6 1058 aa16.06■□□□□ 0.16
SPG7-206ENST00000562775 PSTPIP2Q9H939 334 aa16.06■□□□□ 0.16
SPG7-206ENST00000562775 MORC2Q9Y6X9 1032 aaPredicted RBP16.06■□□□□ 0.16
SPG7-206ENST00000562775 OTOFQ9HC10 1997 aa16.06■□□□□ 0.16
SPG7-206ENST00000562775 A0A1W2PQ27 194 aa16.05■□□□□ 0.16
SPG7-206ENST00000562775 A0A1W2PQ64 194 aa16.05■□□□□ 0.16
SPG7-206ENST00000562775 A0A1W2PQD8 194 aa16.05■□□□□ 0.16
SPG7-206ENST00000562775 HMGCS2P54868 508 aa16.05■□□□□ 0.16
SPG7-206ENST00000562775 DGKZQ13574 1117 aa16.05■□□□□ 0.16
SPG7-206ENST00000562775 NONOQ15233 471 aaKnown RBP eCLIP16.05■□□□□ 0.16
SPG7-206ENST00000562775 SYAP1Q96A49 352 aaPredicted RBP16.05■□□□□ 0.16
SPG7-206ENST00000562775 TANGO6Q9C0B7 1094 aa16.05■□□□□ 0.16
SPG7-206ENST00000562775 GZF1Q9H116 711 aaPredicted RBP16.05■□□□□ 0.16
SPG7-206ENST00000562775 RPAP3Q9H6T3 665 aaPredicted RBP16.05■□□□□ 0.16
SPG7-206ENST00000562775 TMOD4Q9NZQ9 345 aa16.05■□□□□ 0.16
SPG7-206ENST00000562775 BIN2Q9UBW5 565 aaPredicted RBP16.05■□□□□ 0.16
SPG7-206ENST00000562775 PPATQ06203 517 aa16.04■□□□□ 0.16
SPG7-206ENST00000562775 LDHDQ86WU2 507 aa16.04■□□□□ 0.16
SPG7-206ENST00000562775 ERO1BQ86YB8 467 aa16.04■□□□□ 0.16
SPG7-206ENST00000562775 TEX2Q8IWB9 1127 aa16.04■□□□□ 0.16
SPG7-206ENST00000562775 FLOT1O75955 427 aa16.04■□□□□ 0.16
SPG7-206ENST00000562775 FDX1P10109 184 aa16.04■□□□□ 0.16
SPG7-206ENST00000562775 MARCKSP29966 332 aaPredicted RBP16.04■□□□□ 0.16
SPG7-206ENST00000562775 CLK2P49760 499 aaKnown RBP16.04■□□□□ 0.16
SPG7-206ENST00000562775 INF2Q27J81 1249 aa16.04■□□□□ 0.16
SPG7-206ENST00000562775 USH1GQ495M9 461 aa16.04■□□□□ 0.16
SPG7-206ENST00000562775 AXDND1Q5T1B0 1012 aaPredicted RBP16.04■□□□□ 0.16
SPG7-206ENST00000562775 JAKMIP3Q5VZ66 844 aa16.04■□□□□ 0.16
SPG7-206ENST00000562775 MOB2Q70IA6 237 aa16.04■□□□□ 0.16
SPG7-206ENST00000562775 ELP3Q9H9T3 547 aa16.04■□□□□ 0.16
SPG7-206ENST00000562775 TMEM63CQ9P1W3 806 aa16.04■□□□□ 0.16
SPG7-206ENST00000562775 PPP1R9AQ9ULJ8 1098 aa16.04■□□□□ 0.16
SPG7-206ENST00000562775 SPDYE5A6NIY4 337 aa16.03■□□□□ 0.16
SPG7-206ENST00000562775 UNCXA6NJT0 531 aa16.03■□□□□ 0.16
SPG7-206ENST00000562775 WNT7AO00755 349 aa16.03■□□□□ 0.16
SPG7-206ENST00000562775 CUTAO60888 179 aa16.03■□□□□ 0.16
SPG7-206ENST00000562775 LIG1P18858 919 aa16.03■□□□□ 0.16
SPG7-206ENST00000562775 PTPREP23469 700 aa16.03■□□□□ 0.16
SPG7-206ENST00000562775 ZNF174Q15697 407 aa16.03■□□□□ 0.16
SPG7-206ENST00000562775 LDLRAD1Q5T700 205 aa16.03■□□□□ 0.16
SPG7-206ENST00000562775 MCTP2Q6DN12 878 aa16.03■□□□□ 0.16
SPG7-206ENST00000562775 CCDC174Q6PII3 467 aa16.03■□□□□ 0.16
SPG7-206ENST00000562775 CCAR1Q8IX12 1150 aaKnown RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms