RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 GPCPD1Q9NPB8 672 aa15.66■□□□□ 0.1
CDH1-204ENST00000562118 PNMA2Q9UL42 364 aa15.66■□□□□ 0.1
CDH1-204ENST00000562118 RIPK3Q9Y572 518 aa15.66■□□□□ 0.1
CDH1-204ENST00000562118 BAZ2BQ9UIF8 2168 aaKnown RBP15.66■□□□□ 0.1
CDH1-204ENST00000562118 LRRC37A2A6NM11 1700 aa15.65■□□□□ 0.1
CDH1-204ENST00000562118 CCDC69A6NI79 296 aa15.65■□□□□ 0.1
CDH1-204ENST00000562118 SLC15A5A6NIM6 579 aa15.65■□□□□ 0.1
CDH1-204ENST00000562118 KLRF2D3W0D1 207 aa15.65■□□□□ 0.1
CDH1-204ENST00000562118 HOXD10P28358 340 aa15.65■□□□□ 0.1
CDH1-204ENST00000562118 FUT2Q10981 343 aa15.65■□□□□ 0.1
CDH1-204ENST00000562118 SNRNP48Q6IEG0 339 aaKnown RBP15.65■□□□□ 0.1
CDH1-204ENST00000562118 Q6ZUG5 572 aa15.65■□□□□ 0.1
CDH1-204ENST00000562118 NBPF11Q86T75 865 aa15.65■□□□□ 0.1
CDH1-204ENST00000562118 CHST13Q8NET6 341 aa15.65■□□□□ 0.1
CDH1-204ENST00000562118 COA7Q96BR5 231 aa15.65■□□□□ 0.1
CDH1-204ENST00000562118 BACH2Q9BYV9 841 aa15.65■□□□□ 0.1
CDH1-204ENST00000562118 MCOLN1Q9GZU1 580 aa15.65■□□□□ 0.1
CDH1-204ENST00000562118 FAM217BQ9NTX9 383 aaPredicted RBP15.65■□□□□ 0.1
CDH1-204ENST00000562118 GABRQQ9UN88 632 aa15.65■□□□□ 0.1
CDH1-204ENST00000562118 HPS5Q9UPZ3 1129 aa15.65■□□□□ 0.1
CDH1-204ENST00000562118 SLC12A7Q9Y666 1083 aa15.65■□□□□ 0.1
CDH1-204ENST00000562118 CYP46A1Q9Y6A2 500 aa15.65■□□□□ 0.1
CDH1-204ENST00000562118 DNAJC25-GNG10A0A024R161 153 aa15.64■□□□□ 0.09
CDH1-204ENST00000562118 FMNL1O95466 1100 aaPredicted RBP15.64■□□□□ 0.09
CDH1-204ENST00000562118 GHRHRQ02643 423 aa15.64■□□□□ 0.09
CDH1-204ENST00000562118 PPP2R5BQ15173 497 aa15.64■□□□□ 0.09
CDH1-204ENST00000562118 TMTC3Q6ZXV5 915 aa15.64■□□□□ 0.09
CDH1-204ENST00000562118 FANCBQ8NB91 859 aa15.64■□□□□ 0.09
CDH1-204ENST00000562118 PXYLP1Q8TE99 480 aa15.64■□□□□ 0.09
CDH1-204ENST00000562118 ARMC5Q96C12 935 aa15.64■□□□□ 0.09
CDH1-204ENST00000562118 LZTS2Q9BRK4 669 aa15.64■□□□□ 0.09
CDH1-204ENST00000562118 MYL10Q9BUA6 226 aa15.64■□□□□ 0.09
CDH1-204ENST00000562118 CPVLQ9H3G5 476 aa15.64■□□□□ 0.09
CDH1-204ENST00000562118 RAVER2Q9HCJ3 691 aaKnown RBP15.64■□□□□ 0.09
CDH1-204ENST00000562118 MTMR7Q9Y216 660 aa15.64■□□□□ 0.09
CDH1-204ENST00000562118 PTCH2Q9Y6C5 1203 aa15.64■□□□□ 0.09
CDH1-204ENST00000562118 KIF5BP33176 963 aa15.63■□□□□ 0.09
CDH1-204ENST00000562118 FLT3LGP49771 235 aa15.63■□□□□ 0.09
CDH1-204ENST00000562118 GNAQP50148 359 aa15.63■□□□□ 0.09
CDH1-204ENST00000562118 CDC37Q16543 378 aaPredicted RBP15.63■□□□□ 0.09
CDH1-204ENST00000562118 IL27Q8NEV9 243 aa15.63■□□□□ 0.09
CDH1-204ENST00000562118 BRF1Q92994 677 aa15.63■□□□□ 0.09
CDH1-204ENST00000562118 AGBL1Q96MI9 1066 aa15.63■□□□□ 0.09
CDH1-204ENST00000562118 UPF3BQ9BZI7 483 aaKnown RBP15.63■□□□□ 0.09
CDH1-204ENST00000562118 UBA5Q9GZZ9 404 aa15.63■□□□□ 0.09
CDH1-204ENST00000562118 FBXO40Q9UH90 709 aa15.63■□□□□ 0.09
CDH1-204ENST00000562118 KLF18A0A0U1RQI7 1052 aa15.62■□□□□ 0.09
CDH1-204ENST00000562118 ZBTB5O15062 677 aa15.62■□□□□ 0.09
CDH1-204ENST00000562118 ZBTB43O43298 467 aa15.62■□□□□ 0.09
CDH1-204ENST00000562118 PPP1R11O60927 126 aaPredicted RBP15.62■□□□□ 0.09
CDH1-204ENST00000562118 IKQ13123 557 aaPredicted RBP15.62■□□□□ 0.09
CDH1-204ENST00000562118 MAP2K5Q13163 448 aa15.62■□□□□ 0.09
CDH1-204ENST00000562118 QRICH1Q2TAL8 776 aa15.62■□□□□ 0.09
CDH1-204ENST00000562118 NFXL1Q6ZNB6 911 aa15.62■□□□□ 0.09
CDH1-204ENST00000562118 SRBD1Q8N5C6 995 aaKnown RBP15.62■□□□□ 0.09
CDH1-204ENST00000562118 CTCFLQ8NI51 663 aaPredicted RBP15.62■□□□□ 0.09
CDH1-204ENST00000562118 CLEC4DQ8WXI8 215 aa15.62■□□□□ 0.09
CDH1-204ENST00000562118 CHMP4CQ96CF2 233 aa15.62■□□□□ 0.09
CDH1-204ENST00000562118 ZNF274Q96GC6 653 aaPredicted RBP15.62■□□□□ 0.09
CDH1-204ENST00000562118 TBC1D32Q96NH3 1257 aa15.62■□□□□ 0.09
CDH1-204ENST00000562118 APBA2Q99767 749 aa15.62■□□□□ 0.09
CDH1-204ENST00000562118 NUDT12Q9BQG2 462 aa15.62■□□□□ 0.09
CDH1-204ENST00000562118 C22orf23Q9BZE7 217 aa15.62■□□□□ 0.09
CDH1-204ENST00000562118 RBM28Q9NW13 759 aaKnown RBP15.62■□□□□ 0.09
CDH1-204ENST00000562118 DIS3Q9Y2L1 958 aaKnown RBP15.62■□□□□ 0.09
CDH1-204ENST00000562118 CNTNAP5Q8WYK1 1306 aa15.62■□□□□ 0.09
CDH1-204ENST00000562118 FRMPD3Q5JV73 1810 aa15.61■□□□□ 0.09
CDH1-204ENST00000562118 PLEKHA8P1O95397 391 aa15.61■□□□□ 0.09
CDH1-204ENST00000562118 ADORA2AP29274 412 aa15.61■□□□□ 0.09
CDH1-204ENST00000562118 RGS2P41220 211 aa15.61■□□□□ 0.09
CDH1-204ENST00000562118 APOBRQ0VD83 1088 aa15.61■□□□□ 0.09
CDH1-204ENST00000562118 PLS1Q14651 629 aa15.61■□□□□ 0.09
CDH1-204ENST00000562118 MICU3Q86XE3 530 aa15.61■□□□□ 0.09
CDH1-204ENST00000562118 NCAPG2Q86XI2 1143 aa15.61■□□□□ 0.09
CDH1-204ENST00000562118 SLAIN1Q8ND83 568 aa15.61■□□□□ 0.09
CDH1-204ENST00000562118 RGS22Q8NE09 1264 aa15.61■□□□□ 0.09
CDH1-204ENST00000562118 FGD4Q96M96 766 aa15.61■□□□□ 0.09
CDH1-204ENST00000562118 ACAD9Q9H845 621 aa15.61■□□□□ 0.09
CDH1-204ENST00000562118 OPLAHO14841 1288 aa15.6■□□□□ 0.09
CDH1-204ENST00000562118 COBLO75128 1261 aa15.6■□□□□ 0.09
CDH1-204ENST00000562118 FCER1AP12319 257 aa15.6■□□□□ 0.09
CDH1-204ENST00000562118 RXRAP19793 462 aa15.6■□□□□ 0.09
CDH1-204ENST00000562118 PDIA3P30101 505 aaKnown RBP15.6■□□□□ 0.09
CDH1-204ENST00000562118 CDC27P30260 824 aa15.6■□□□□ 0.09
CDH1-204ENST00000562118 SNAP25P60880 206 aa15.6■□□□□ 0.09
CDH1-204ENST00000562118 NTRK3Q16288 839 aa15.6■□□□□ 0.09
CDH1-204ENST00000562118 ZNF792Q3KQV3 632 aa15.6■□□□□ 0.09
CDH1-204ENST00000562118 MAP3K21Q5TCX8 1036 aa15.6■□□□□ 0.09
CDH1-204ENST00000562118 OLFML2BQ68BL8 750 aa15.6■□□□□ 0.09
CDH1-204ENST00000562118 CCDC174Q6PII3 467 aa15.6■□□□□ 0.09
CDH1-204ENST00000562118 TRMT44Q8IYL2 757 aaKnown RBP15.6■□□□□ 0.09
CDH1-204ENST00000562118 CPXCR1Q8N123 301 aa15.6■□□□□ 0.09
CDH1-204ENST00000562118 NUP133Q8WUM0 1156 aa15.6■□□□□ 0.09
CDH1-204ENST00000562118 RNF146Q9NTX7 359 aa15.6■□□□□ 0.09
CDH1-204ENST00000562118 PDRG1Q9NUG6 133 aa15.6■□□□□ 0.09
CDH1-204ENST00000562118 CCPG1Q9ULG6 757 aa15.6■□□□□ 0.09
CDH1-204ENST00000562118 ABCB11O95342 1321 aa15.6■□□□□ 0.09
CDH1-204ENST00000562118 MCM3APO60318 1980 aa15.59■□□□□ 0.09
CDH1-204ENST00000562118 PNMA6FA0A0J9YX94 578 aa15.59■□□□□ 0.09
CDH1-204ENST00000562118 RTN1Q16799 776 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms