RNA–Protein interactions for RNA: ENST00000561956.1

AC009054.2-201, humanhuman

TSL 3 BASIC

Gene AC009054.2, Length 374 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009054.2-201ENST00000561956 DIS3L2Q8IYB7 885 aaKnown RBP12.49□□□□□ -0.41
AC009054.2-201ENST00000561956 CCDC12Q8WUD4 166 aaPredicted RBP12.49□□□□□ -0.41
AC009054.2-201ENST00000561956 OPTNQ96CV9 577 aa12.49□□□□□ -0.41
AC009054.2-201ENST00000561956 GBP4Q96PP9 640 aa12.49□□□□□ -0.41
AC009054.2-201ENST00000561956 SLF1Q9BQI6 1058 aa12.49□□□□□ -0.41
AC009054.2-201ENST00000561956 TANGO6Q9C0B7 1094 aa12.49□□□□□ -0.41
AC009054.2-201ENST00000561956 RANBP17Q9H2T7 1088 aaKnown RBP12.49□□□□□ -0.41
AC009054.2-201ENST00000561956 ESYT2A0FGR8 921 aa12.48□□□□□ -0.41
AC009054.2-201ENST00000561956 CALML3P27482 149 aa12.48□□□□□ -0.41
AC009054.2-201ENST00000561956 KRT2P35908 639 aa12.48□□□□□ -0.41
AC009054.2-201ENST00000561956 NLRP5P59047 1200 aa12.48□□□□□ -0.41
AC009054.2-201ENST00000561956 SNAP25P60880 206 aa12.48□□□□□ -0.41
AC009054.2-201ENST00000561956 GALNT17Q6IS24 598 aa12.48□□□□□ -0.41
AC009054.2-201ENST00000561956 PRPF38AQ8NAV1 312 aaKnown RBP12.48□□□□□ -0.41
AC009054.2-201ENST00000561956 DAGLBQ8NCG7 672 aa12.48□□□□□ -0.41
AC009054.2-201ENST00000561956 PROCA1Q8NCQ7 364 aaPredicted RBP12.48□□□□□ -0.41
AC009054.2-201ENST00000561956 OXER1Q8TDS5 423 aa12.48□□□□□ -0.41
AC009054.2-201ENST00000561956 TNFRSF25Q93038 417 aa12.48□□□□□ -0.41
AC009054.2-201ENST00000561956 KIFC2Q96AC6 838 aa12.48□□□□□ -0.41
AC009054.2-201ENST00000561956 COA7Q96BR5 231 aa12.48□□□□□ -0.41
AC009054.2-201ENST00000561956 SLC10A4Q96EP9 437 aa12.48□□□□□ -0.41
AC009054.2-201ENST00000561956 ZMYND12Q9H0C1 365 aa12.48□□□□□ -0.41
AC009054.2-201ENST00000561956 FOXP1Q9H334 677 aaPredicted RBP12.48□□□□□ -0.41
AC009054.2-201ENST00000561956 PPP1R9AQ9ULJ8 1098 aa12.48□□□□□ -0.41
AC009054.2-201ENST00000561956 TCHHQ07283 1943 aa12.48□□□□□ -0.41
AC009054.2-201ENST00000561956 BTBD18B2RXH4 712 aa12.47□□□□□ -0.41
AC009054.2-201ENST00000561956 USP17L15C9J2P7 530 aa12.47□□□□□ -0.41
AC009054.2-201ENST00000561956 USP17L13C9JLJ4 530 aa12.47□□□□□ -0.41
AC009054.2-201ENST00000561956 USP17L11C9JVI0 530 aa12.47□□□□□ -0.41
AC009054.2-201ENST00000561956 USP17L18D6R9N7 530 aa12.47□□□□□ -0.41
AC009054.2-201ENST00000561956 USP17L22D6RA61 530 aa12.47□□□□□ -0.41
AC009054.2-201ENST00000561956 USP17L17D6RBQ6 530 aa12.47□□□□□ -0.41
AC009054.2-201ENST00000561956 USP17L19D6RCP7 530 aa12.47□□□□□ -0.41
AC009054.2-201ENST00000561956 USP17L20D6RJB6 530 aa12.47□□□□□ -0.41
AC009054.2-201ENST00000561956 FLOT1O75955 427 aa12.47□□□□□ -0.41
AC009054.2-201ENST00000561956 USP17L24Q0WX57 530 aa12.47□□□□□ -0.41
AC009054.2-201ENST00000561956 GNL2Q13823 731 aaKnown RBP12.47□□□□□ -0.41
AC009054.2-201ENST00000561956 FOXD4L6Q3SYB3 417 aaPredicted RBP12.47□□□□□ -0.41
AC009054.2-201ENST00000561956 FAM173BQ6P4H8 233 aa12.47□□□□□ -0.41
AC009054.2-201ENST00000561956 FOXD4L3Q6VB84 417 aaPredicted RBP12.47□□□□□ -0.41
AC009054.2-201ENST00000561956 CATSPERGQ6ZRH7 1159 aa12.47□□□□□ -0.41
AC009054.2-201ENST00000561956 FBXO11Q86XK2 927 aa12.47□□□□□ -0.41
AC009054.2-201ENST00000561956 NOSTRINQ8IVI9 506 aa12.47□□□□□ -0.41
AC009054.2-201ENST00000561956 WNK4Q96J92 1243 aa12.47□□□□□ -0.41
AC009054.2-201ENST00000561956 CHAMP1Q96JM3 812 aa12.47□□□□□ -0.41
AC009054.2-201ENST00000561956 AMNQ9BXJ7 453 aa12.47□□□□□ -0.41
AC009054.2-201ENST00000561956 BRMS1Q9HCU9 246 aa12.47□□□□□ -0.41
AC009054.2-201ENST00000561956 PCDHA4Q9UN74 947 aa12.47□□□□□ -0.41
AC009054.2-201ENST00000561956 A0A0G2JMZ2 1700 aa12.47□□□□□ -0.41
AC009054.2-201ENST00000561956 MYPNQ86TC9 1320 aa12.46□□□□□ -0.41
AC009054.2-201ENST00000561956 SMCO2A6NFE2 343 aa12.46□□□□□ -0.41
AC009054.2-201ENST00000561956 M0R2N6 131 aa12.46□□□□□ -0.41
AC009054.2-201ENST00000561956 FDX1P10109 184 aa12.46□□□□□ -0.41
AC009054.2-201ENST00000561956 MCM4P33991 863 aa12.46□□□□□ -0.41
AC009054.2-201ENST00000561956 DNM1Q05193 864 aaKnown RBP12.46□□□□□ -0.41
AC009054.2-201ENST00000561956 TRAF1Q13077 416 aa12.46□□□□□ -0.41
AC009054.2-201ENST00000561956 NR5A1Q13285 461 aa12.46□□□□□ -0.41
AC009054.2-201ENST00000561956 MOGSQ13724 837 aa12.46□□□□□ -0.41
AC009054.2-201ENST00000561956 MYSM1Q5VVJ2 828 aa12.46□□□□□ -0.41
AC009054.2-201ENST00000561956 GADL1Q6ZQY3 521 aa12.46□□□□□ -0.41
AC009054.2-201ENST00000561956 BLIDQ8IZY5 108 aa12.46□□□□□ -0.41
AC009054.2-201ENST00000561956 SMC1BQ8NDV3 1235 aa12.46□□□□□ -0.41
AC009054.2-201ENST00000561956 SLC38A10Q9HBR0 1119 aa12.46□□□□□ -0.41
AC009054.2-201ENST00000561956 C6orf50Q9HD87 102 aa12.46□□□□□ -0.41
AC009054.2-201ENST00000561956 PCDHA1Q9Y5I3 950 aa12.46□□□□□ -0.41
AC009054.2-201ENST00000561956 COL11A1P12107 1806 aaPredicted RBP12.46□□□□□ -0.42
AC009054.2-201ENST00000561956 ADAMTS3O15072 1205 aa12.45□□□□□ -0.42
AC009054.2-201ENST00000561956 GNA11P29992 359 aa12.45□□□□□ -0.42
AC009054.2-201ENST00000561956 DSG3P32926 999 aa12.45□□□□□ -0.42
AC009054.2-201ENST00000561956 ADCY7P51828 1080 aa12.45□□□□□ -0.42
AC009054.2-201ENST00000561956 KRT85P78386 507 aa12.45□□□□□ -0.42
AC009054.2-201ENST00000561956 SNAPC2Q13487 334 aa12.45□□□□□ -0.42
AC009054.2-201ENST00000561956 NFKBIBQ15653 356 aa12.45□□□□□ -0.42
AC009054.2-201ENST00000561956 TREML2Q5T2D2 321 aa12.45□□□□□ -0.42
AC009054.2-201ENST00000561956 ATL3Q6DD88 541 aa12.45□□□□□ -0.42
AC009054.2-201ENST00000561956 CCDC174Q6PII3 467 aa12.45□□□□□ -0.42
AC009054.2-201ENST00000561956 FASTKD5Q7L8L6 764 aaKnown RBP12.45□□□□□ -0.42
AC009054.2-201ENST00000561956 BICD2Q8TD16 824 aa12.45□□□□□ -0.42
AC009054.2-201ENST00000561956 ATG4CQ96DT6 458 aa12.45□□□□□ -0.42
AC009054.2-201ENST00000561956 RIC8AQ9NPQ8 531 aa12.45□□□□□ -0.42
AC009054.2-201ENST00000561956 ADAMTS5Q9UNA0 930 aa12.45□□□□□ -0.42
AC009054.2-201ENST00000561956 AGTPBP1Q9UPW5 1226 aa12.45□□□□□ -0.42
AC009054.2-201ENST00000561956 CNPY2Q9Y2B0 182 aa12.45□□□□□ -0.42
AC009054.2-201ENST00000561956 SMCHD1A6NHR9 2005 aa12.45□□□□□ -0.42
AC009054.2-201ENST00000561956 ZNF536O15090 1300 aa12.44□□□□□ -0.42
AC009054.2-201ENST00000561956 ABCB11O95342 1321 aa12.44□□□□□ -0.42
AC009054.2-201ENST00000561956 VWA5AO00534 786 aa12.44□□□□□ -0.42
AC009054.2-201ENST00000561956 ZBED4O75132 1171 aa12.44□□□□□ -0.42
AC009054.2-201ENST00000561956 ICAM1P05362 532 aa12.44□□□□□ -0.42
AC009054.2-201ENST00000561956 ZBTB48P10074 688 aaPredicted RBP12.44□□□□□ -0.42
AC009054.2-201ENST00000561956 TAL1P17542 331 aaPredicted RBP12.44□□□□□ -0.42
AC009054.2-201ENST00000561956 HOXA7P31268 230 aaPredicted RBP12.44□□□□□ -0.42
AC009054.2-201ENST00000561956 HUNKP57058 714 aa12.44□□□□□ -0.42
AC009054.2-201ENST00000561956 COG2Q14746 738 aa12.44□□□□□ -0.42
AC009054.2-201ENST00000561956 USH1GQ495M9 461 aa12.44□□□□□ -0.42
AC009054.2-201ENST00000561956 SPRYD7Q5W111 196 aa12.44□□□□□ -0.42
AC009054.2-201ENST00000561956 TMEM87AQ8NBN3 555 aa12.44□□□□□ -0.42
AC009054.2-201ENST00000561956 REPS2Q8NFH8 660 aa12.44□□□□□ -0.42
AC009054.2-201ENST00000561956 ZNF396Q96N95 335 aaPredicted RBP12.44□□□□□ -0.42
AC009054.2-201ENST00000561956 GLT8D2Q9H1C3 349 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms