RNA–Protein interactions for RNA: ENST00000561187.1

SNRPA1-215, Transcript of small nuclear ribonucleoprotein polypeptide A', human

TSL 2

Gene SNRPA1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNRPA1-215	ENST00000561187	CHST13	Q8NET6	341 aa		32.06	■■■□□ 2.72
SNRPA1-215	ENST00000561187	RNF146	Q9NTX7	359 aa		32.06	■■■□□ 2.72
SNRPA1-215	ENST00000561187	FBXO40	Q9UH90	709 aa		32.06	■■■□□ 2.72
SNRPA1-215	ENST00000561187	ADCY6	O43306	1168 aa		32.05	■■■□□ 2.72
SNRPA1-215	ENST00000561187	CNTN2	Q02246	1040 aa		32.05	■■■□□ 2.72
SNRPA1-215	ENST00000561187	SHH	Q15465	462 aa		32.05	■■■□□ 2.72
SNRPA1-215	ENST00000561187	RRP12	Q5JTH9	1297 aa	Known RBP	32.05	■■■□□ 2.72
SNRPA1-215	ENST00000561187	MAMDC4	Q6UXC1	1216 aa		32.05	■■■□□ 2.72
SNRPA1-215	ENST00000561187	ARMCX2	Q7L311	632 aa		32.05	■■■□□ 2.72
SNRPA1-215	ENST00000561187	MSL3	Q8N5Y2	521 aa	Known RBP	32.05	■■■□□ 2.72
SNRPA1-215	ENST00000561187	GMCL1	Q96IK5	515 aa		32.05	■■■□□ 2.72
SNRPA1-215	ENST00000561187	LNPK	Q9C0E8	428 aa		32.05	■■■□□ 2.72
SNRPA1-215	ENST00000561187	MTMR10	Q9NXD2	777 aa		32.05	■■■□□ 2.72
SNRPA1-215	ENST00000561187	OAZ1	P54368	228 aa		32.04	■■■□□ 2.72
SNRPA1-215	ENST00000561187	ACVR2B	Q13705	512 aa		32.04	■■■□□ 2.72
SNRPA1-215	ENST00000561187	CCDC96	Q2M329	555 aa		32.04	■■■□□ 2.72
SNRPA1-215	ENST00000561187	ACAD9	Q9H845	621 aa		32.04	■■■□□ 2.72
SNRPA1-215	ENST00000561187	DDX49	Q9Y6V7	483 aa	Known RBP	32.04	■■■□□ 2.72
SNRPA1-215	ENST00000561187	CLTB	P09497	229 aa		32.03	■■■□□ 2.72
SNRPA1-215	ENST00000561187	ALAS1	P13196	640 aa		32.03	■■■□□ 2.72
SNRPA1-215	ENST00000561187	ITGB8	P26012	769 aa		32.03	■■■□□ 2.72
SNRPA1-215	ENST00000561187	FAM160B2	Q86V87	743 aa		32.03	■■■□□ 2.72
SNRPA1-215	ENST00000561187	CHURC1	Q8WUH1	139 aa		32.03	■■■□□ 2.72
SNRPA1-215	ENST00000561187	STAG1	Q8WVM7	1258 aa		32.03	■■■□□ 2.72
SNRPA1-215	ENST00000561187	STARD7	Q9NQZ5	370 aa		32.03	■■■□□ 2.72
SNRPA1-215	ENST00000561187	ZNF536	O15090	1300 aa		32.02	■■■□□ 2.72
SNRPA1-215	ENST00000561187	C6orf222	P0C671	652 aa	Predicted RBP	32.02	■■■□□ 2.72
SNRPA1-215	ENST00000561187	ACLY	P53396	1101 aa		32.02	■■■□□ 2.72
SNRPA1-215	ENST00000561187	HDAC1	Q13547	482 aa	Predicted RBP	32.02	■■■□□ 2.72
SNRPA1-215	ENST00000561187	C1orf53	Q5VUE5	145 aa		32.02	■■■□□ 2.72
SNRPA1-215	ENST00000561187	B4GALNT3	Q6L9W6	998 aa		32.02	■■■□□ 2.72
SNRPA1-215	ENST00000561187	ZNF467	Q7Z7K2	595 aa	Predicted RBP	32.02	■■■□□ 2.72
SNRPA1-215	ENST00000561187	CCDC144CP	Q8IYA2	1237 aa		32.02	■■■□□ 2.72
SNRPA1-215	ENST00000561187	A1CF	Q9NQ94	594 aa	Known RBP	32.02	■■■□□ 2.72
SNRPA1-215	ENST00000561187	TRIM6-TRIM34	B2RNG4	842 aa		32.01	■■■□□ 2.71
SNRPA1-215	ENST00000561187	POTEB2	H3BUK9	544 aa		32.01	■■■□□ 2.71
SNRPA1-215	ENST00000561187	NMI	Q13287	307 aa	Predicted RBP	32.01	■■■□□ 2.71
SNRPA1-215	ENST00000561187	KCNA10	Q16322	511 aa		32.01	■■■□□ 2.71
SNRPA1-215	ENST00000561187	CCDC144B	Q3MJ40	725 aa		32.01	■■■□□ 2.71
SNRPA1-215	ENST00000561187	ZNF589	Q86UQ0	364 aa	Predicted RBP	32.01	■■■□□ 2.71
SNRPA1-215	ENST00000561187	HELLS	Q9NRZ9	838 aa		32.01	■■■□□ 2.71
SNRPA1-215	ENST00000561187	HAND2	P61296	217 aa		32	■■■□□ 2.71
SNRPA1-215	ENST00000561187	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	32	■■■□□ 2.71
SNRPA1-215	ENST00000561187	PRR12	Q9ULL5	1215 aa		32	■■■□□ 2.71
SNRPA1-215	ENST00000561187	DUSP11	O75319	330 aa	Known RBP	31.99	■■■□□ 2.71
SNRPA1-215	ENST00000561187	KLHDC9	Q8NEP7	349 aa		31.99	■■■□□ 2.71
SNRPA1-215	ENST00000561187	RILPL2	Q969X0	211 aa		31.99	■■■□□ 2.71
SNRPA1-215	ENST00000561187	TRERF1	Q96PN7	1200 aa		31.99	■■■□□ 2.71
SNRPA1-215	ENST00000561187	ABHD16B	Q9H3Z7	469 aa		31.99	■■■□□ 2.71
SNRPA1-215	ENST00000561187	ANAPC4	Q9UJX5	808 aa		31.99	■■■□□ 2.71
SNRPA1-215	ENST00000561187	MCMDC2	Q4G0Z9	681 aa		31.98	■■■□□ 2.71
SNRPA1-215	ENST00000561187	MUM1L1	Q5H9M0	696 aa		31.98	■■■□□ 2.71
SNRPA1-215	ENST00000561187	PPP4R3B	Q5MIZ7	849 aa		31.98	■■■□□ 2.71
SNRPA1-215	ENST00000561187	RCSD1	Q6JBY9	416 aa		31.98	■■■□□ 2.71
SNRPA1-215	ENST00000561187	TMEM39A	Q9NV64	488 aa		31.98	■■■□□ 2.71
SNRPA1-215	ENST00000561187	FRMPD2	Q68DX3	1309 aa	Predicted RBP	31.98	■■■□□ 2.71
SNRPA1-215	ENST00000561187	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	31.97	■■■□□ 2.71
SNRPA1-215	ENST00000561187	ORC4	O43929	436 aa		31.97	■■■□□ 2.71
SNRPA1-215	ENST00000561187	FGA	P02671	866 aa		31.97	■■■□□ 2.71
SNRPA1-215	ENST00000561187	FDX1	P10109	184 aa		31.97	■■■□□ 2.71
SNRPA1-215	ENST00000561187	RAG1	P15918	1043 aa		31.97	■■■□□ 2.71
SNRPA1-215	ENST00000561187	PTGS1	P23219	599 aa		31.97	■■■□□ 2.71
SNRPA1-215	ENST00000561187	SLC16A2	P36021	539 aa		31.97	■■■□□ 2.71
SNRPA1-215	ENST00000561187	TTBK2	Q6IQ55	1244 aa		31.97	■■■□□ 2.71
SNRPA1-215	ENST00000561187	NOL8	Q76FK4	1167 aa	Known RBP	31.97	■■■□□ 2.71
SNRPA1-215	ENST00000561187	FAM133A	Q8N9E0	248 aa		31.97	■■■□□ 2.71
SNRPA1-215	ENST00000561187	VTI1A	Q96AJ9	217 aa		31.97	■■■□□ 2.71
SNRPA1-215	ENST00000561187	TSEN34	Q9BSV6	310 aa	Known RBP	31.97	■■■□□ 2.71
SNRPA1-215	ENST00000561187	STXBP5L	Q9Y2K9	1186 aa		31.97	■■■□□ 2.71
SNRPA1-215	ENST00000561187		A0A0C4DFX4	3053 aa		31.96	■■■□□ 2.71
SNRPA1-215	ENST00000561187	SOWAHB	A6NEL2	793 aa		31.96	■■■□□ 2.71
SNRPA1-215	ENST00000561187	EPHB4	P54760	987 aa		31.96	■■■□□ 2.71
SNRPA1-215	ENST00000561187	CCSAP	Q6IQ19	270 aa	Predicted RBP	31.96	■■■□□ 2.71
SNRPA1-215	ENST00000561187	NUP133	Q8WUM0	1156 aa		31.96	■■■□□ 2.71
SNRPA1-215	ENST00000561187	CCPG1	Q9ULG6	757 aa		31.96	■■■□□ 2.71
SNRPA1-215	ENST00000561187	LRRC37A2	A6NM11	1700 aa		31.95	■■■□□ 2.71
SNRPA1-215	ENST00000561187	MOXD2P	A6NHM9	499 aa		31.95	■■■□□ 2.71
SNRPA1-215	ENST00000561187	HSPD1	P10809	573 aa	Known RBP	31.95	■■■□□ 2.71
SNRPA1-215	ENST00000561187	ALX1	Q15699	326 aa		31.95	■■■□□ 2.71
SNRPA1-215	ENST00000561187	NSMF	Q6X4W1	530 aa		31.95	■■■□□ 2.71
SNRPA1-215	ENST00000561187	GUCD1	Q96NT3	240 aa		31.95	■■■□□ 2.71
SNRPA1-215	ENST00000561187	PURB	Q96QR8	312 aa	Known RBP	31.95	■■■□□ 2.71
SNRPA1-215	ENST00000561187	KATNBL1	Q9H079	304 aa		31.95	■■■□□ 2.71
SNRPA1-215	ENST00000561187	SPC25	Q9HBM1	224 aa		31.95	■■■□□ 2.71
SNRPA1-215	ENST00000561187	ASGR1	P07306	291 aa		31.94	■■■□□ 2.7
SNRPA1-215	ENST00000561187	BEX3	Q00994	111 aa		31.94	■■■□□ 2.7
SNRPA1-215	ENST00000561187	FAAP100	Q0VG06	881 aa		31.94	■■■□□ 2.7
SNRPA1-215	ENST00000561187	ZNF697	Q5TEC3	545 aa		31.94	■■■□□ 2.7
SNRPA1-215	ENST00000561187	EEPD1	Q7L9B9	569 aa		31.94	■■■□□ 2.7
SNRPA1-215	ENST00000561187	GLT1D1	Q96MS3	346 aa		31.94	■■■□□ 2.7
SNRPA1-215	ENST00000561187	GPCPD1	Q9NPB8	672 aa		31.94	■■■□□ 2.7
SNRPA1-215	ENST00000561187	ASTN1	O14525	1302 aa		31.94	■■■□□ 2.7
SNRPA1-215	ENST00000561187	CCDC171	Q6TFL3	1326 aa		31.94	■■■□□ 2.7
SNRPA1-215	ENST00000561187	DCDC2C	A8MYV0	355 aa		31.93	■■■□□ 2.7
SNRPA1-215	ENST00000561187	KIAA0355	O15063	1070 aa		31.93	■■■□□ 2.7
SNRPA1-215	ENST00000561187	TKFC	Q3LXA3	575 aa		31.93	■■■□□ 2.7
SNRPA1-215	ENST00000561187	GNAS	Q5JWF2	1037 aa		31.93	■■■□□ 2.7
SNRPA1-215	ENST00000561187	DCAF4	Q8WV16	495 aa		31.93	■■■□□ 2.7
SNRPA1-215	ENST00000561187	PLA2G6	O60733	806 aa		31.92	■■■□□ 2.7
SNRPA1-215	ENST00000561187	TBC1D10C	Q8IV04	446 aa		31.92	■■■□□ 2.7

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