RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 CDCP2Q5VXM1 449 aa2.43□□□□□ -2.02
RTF1-207ENST00000561076 TDRD10Q5VZ19 366 aaKnown RBP2.43□□□□□ -2.02
RTF1-207ENST00000561076 ZKSCAN2Q63HK3 967 aa2.43□□□□□ -2.02
RTF1-207ENST00000561076 KANK3Q6NY19 840 aa2.43□□□□□ -2.02
RTF1-207ENST00000561076 ZCCHC8Q6NZY4 707 aaKnown RBP2.43□□□□□ -2.02
RTF1-207ENST00000561076 MZT2AQ6P582 158 aa2.43□□□□□ -2.02
RTF1-207ENST00000561076 DARS2Q6PI48 645 aaKnown RBP2.43□□□□□ -2.02
RTF1-207ENST00000561076 POTEGQ6S5H5 508 aa2.43□□□□□ -2.02
RTF1-207ENST00000561076 CDC37L1Q7L3B6 337 aa2.43□□□□□ -2.02
RTF1-207ENST00000561076 DHX32Q7L7V1 743 aaKnown RBP2.43□□□□□ -2.02
RTF1-207ENST00000561076 FGD2Q7Z6J4 655 aa2.43□□□□□ -2.02
RTF1-207ENST00000561076 SKAP1Q86WV1 359 aa2.43□□□□□ -2.02
RTF1-207ENST00000561076 ZNF227Q86WZ6 799 aa2.43□□□□□ -2.02
RTF1-207ENST00000561076 KIF18BQ86Y91 864 aa2.43□□□□□ -2.02
RTF1-207ENST00000561076 SUGP1Q8IWZ8 645 aaKnown RBP2.43□□□□□ -2.02
RTF1-207ENST00000561076 SLFN12Q8IYM2 578 aa2.43□□□□□ -2.02
RTF1-207ENST00000561076 NXPE1Q8N323 547 aa2.43□□□□□ -2.02
RTF1-207ENST00000561076 CEP120Q8N960 986 aa2.43□□□□□ -2.02
RTF1-207ENST00000561076 NAXEQ8NCW5 288 aa2.43□□□□□ -2.02
RTF1-207ENST00000561076 BVESQ8NE79 360 aa2.43□□□□□ -2.02
RTF1-207ENST00000561076 SLC7A14Q8TBB6 771 aa2.43□□□□□ -2.02
RTF1-207ENST00000561076 PANK1Q8TE04 598 aa2.43□□□□□ -2.02
RTF1-207ENST00000561076 ATP6V1E2Q96A05 226 aa2.43□□□□□ -2.02
RTF1-207ENST00000561076 FERMT2Q96AC1 680 aa2.43□□□□□ -2.02
RTF1-207ENST00000561076 PGBD4Q96DM1 585 aa2.43□□□□□ -2.02
RTF1-207ENST00000561076 ERP27Q96DN0 273 aa2.43□□□□□ -2.02
RTF1-207ENST00000561076 ITPKCQ96DU7 683 aa2.43□□□□□ -2.02
RTF1-207ENST00000561076 PLPPR2Q96GM1 343 aa2.43□□□□□ -2.02
RTF1-207ENST00000561076 FAXDC2Q96IV6 333 aa2.43□□□□□ -2.02
RTF1-207ENST00000561076 PKNOX2Q96KN3 472 aa2.43□□□□□ -2.02
RTF1-207ENST00000561076 MRGPRX2Q96LB1 330 aa2.43□□□□□ -2.02
RTF1-207ENST00000561076 CCDC140Q96MF4 163 aa2.43□□□□□ -2.02
RTF1-207ENST00000561076 SLC6A18Q96N87 628 aa2.43□□□□□ -2.02
RTF1-207ENST00000561076 CNTNAP3BQ96NU0 1288 aa2.43□□□□□ -2.02
RTF1-207ENST00000561076 SLC9A7Q96T83 725 aa2.43□□□□□ -2.02
RTF1-207ENST00000561076 MAP3K14Q99558 947 aa2.43□□□□□ -2.02
RTF1-207ENST00000561076 HAUS7Q99871 368 aa2.43□□□□□ -2.02
RTF1-207ENST00000561076 ALG1Q9BT22 464 aa2.43□□□□□ -2.02
RTF1-207ENST00000561076 PBX4Q9BYU1 374 aa2.43□□□□□ -2.02
RTF1-207ENST00000561076 CNTNAP3Q9BZ76 1288 aa2.43□□□□□ -2.02
RTF1-207ENST00000561076 TRIM8Q9BZR9 551 aa2.43□□□□□ -2.02
RTF1-207ENST00000561076 DDX24Q9GZR7 859 aaKnown RBP eCLIP2.43□□□□□ -2.02
RTF1-207ENST00000561076 MUC3BQ9H195 1237 aa2.43□□□□□ -2.02
RTF1-207ENST00000561076 MYLK2Q9H1R3 596 aa2.43□□□□□ -2.02
RTF1-207ENST00000561076 RASSF4Q9H2L5 321 aa2.43□□□□□ -2.02
RTF1-207ENST00000561076 RUBCNLQ9H714 662 aa2.43□□□□□ -2.02
RTF1-207ENST00000561076 IFT122Q9HBG6 1241 aa2.43□□□□□ -2.02
RTF1-207ENST00000561076 TRIM39Q9HCM9 518 aa2.43□□□□□ -2.02
RTF1-207ENST00000561076 TCF7L1Q9HCS4 588 aa2.43□□□□□ -2.02
RTF1-207ENST00000561076 HELLSQ9NRZ9 838 aa2.43□□□□□ -2.02
RTF1-207ENST00000561076 TRMT13Q9NUP7 481 aaKnown RBP2.43□□□□□ -2.02
RTF1-207ENST00000561076 THG1LQ9NWX6 298 aaKnown RBP2.43□□□□□ -2.02
RTF1-207ENST00000561076 IRAK4Q9NWZ3 460 aa2.43□□□□□ -2.02
RTF1-207ENST00000561076 FBXL21Q9UKT6 434 aa2.43□□□□□ -2.02
RTF1-207ENST00000561076 MAGED2Q9UNF1 606 aaPredicted RBP2.43□□□□□ -2.02
RTF1-207ENST00000561076 NOC2LQ9Y3T9 749 aaKnown RBP2.43□□□□□ -2.02
RTF1-207ENST00000561076 IPPQ9Y573 584 aa2.43□□□□□ -2.02
RTF1-207ENST00000561076 CEP83Q9Y592 693 aa2.43□□□□□ -2.02
RTF1-207ENST00000561076 CORINQ9Y5Q5 1042 aa2.43□□□□□ -2.02
RTF1-207ENST00000561076 LOC102724428A0A0B4J2F2 783 aa2.42□□□□□ -2.02
RTF1-207ENST00000561076 BICDL2A1A5D9 508 aa2.42□□□□□ -2.02
RTF1-207ENST00000561076 ZNF891A8MT65 544 aaPredicted RBP2.42□□□□□ -2.02
RTF1-207ENST00000561076 RNF223E7ERA6 249 aa2.42□□□□□ -2.02
RTF1-207ENST00000561076 J3KRW8 73 aa2.42□□□□□ -2.02
RTF1-207ENST00000561076 J3QW42 95 aa2.42□□□□□ -2.02
RTF1-207ENST00000561076 WNT7AO00755 349 aa2.42□□□□□ -2.02
RTF1-207ENST00000561076 DDX3YO15523 660 aaKnown RBP2.42□□□□□ -2.02
RTF1-207ENST00000561076 PIP5K1CO60331 668 aa2.42□□□□□ -2.02
RTF1-207ENST00000561076 SNX2O60749 519 aa2.42□□□□□ -2.02
RTF1-207ENST00000561076 KCNH1O95259 989 aa2.42□□□□□ -2.02
RTF1-207ENST00000561076 CRTAMO95727 393 aa2.42□□□□□ -2.02
RTF1-207ENST00000561076 APBA3O96018 575 aa2.42□□□□□ -2.02
RTF1-207ENST00000561076 CPP00450 1065 aa2.42□□□□□ -2.02
RTF1-207ENST00000561076 ASGR2P07307 311 aa2.42□□□□□ -2.02
RTF1-207ENST00000561076 FAM163BP0C2L3 166 aa2.42□□□□□ -2.02
RTF1-207ENST00000561076 SLFN14P0C7P3 912 aa2.42□□□□□ -2.02
RTF1-207ENST00000561076 POTEJP0CG39 1038 aa2.42□□□□□ -2.02
RTF1-207ENST00000561076 ACRP10323 421 aa2.42□□□□□ -2.02
RTF1-207ENST00000561076 BMP2P12643 396 aa2.42□□□□□ -2.02
RTF1-207ENST00000561076 RHOQP17081 205 aa2.42□□□□□ -2.02
RTF1-207ENST00000561076 TYRP1P17643 537 aa2.42□□□□□ -2.02
RTF1-207ENST00000561076 XBP1P17861 261 aa2.42□□□□□ -2.02
RTF1-207ENST00000561076 ATP4AP20648 1035 aa2.42□□□□□ -2.02
RTF1-207ENST00000561076 LPOP22079 712 aaPredicted RBP2.42□□□□□ -2.02
RTF1-207ENST00000561076 RRM1P23921 792 aa2.42□□□□□ -2.02
RTF1-207ENST00000561076 AKAP5P24588 427 aa2.42□□□□□ -2.02
RTF1-207ENST00000561076 GRK2P25098 689 aa2.42□□□□□ -2.02
RTF1-207ENST00000561076 SERPINB3P29508 390 aa2.42□□□□□ -2.02
RTF1-207ENST00000561076 GRK4P32298 578 aa2.42□□□□□ -2.02
RTF1-207ENST00000561076 GRIK1P39086 918 aa2.42□□□□□ -2.02
RTF1-207ENST00000561076 ECI1P42126 302 aa2.42□□□□□ -2.02
RTF1-207ENST00000561076 GRK6P43250 576 aa2.42□□□□□ -2.02
RTF1-207ENST00000561076 MAPK10P53779 464 aa2.42□□□□□ -2.02
RTF1-207ENST00000561076 CLNS1AP54105 237 aaKnown RBP2.42□□□□□ -2.02
RTF1-207ENST00000561076 CACNB3P54284 484 aa2.42□□□□□ -2.02
RTF1-207ENST00000561076 SIK1P57059 783 aa2.42□□□□□ -2.02
RTF1-207ENST00000561076 SCAND1P57086 179 aa2.42□□□□□ -2.02
RTF1-207ENST00000561076 FAM193AP78312 1265 aa2.42□□□□□ -2.02
RTF1-207ENST00000561076 TNFAIP2Q03169 654 aa2.42□□□□□ -2.02
RTF1-207ENST00000561076 KCNC4Q03721 635 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms