RNA–Protein interactions for RNA: ENST00000561009.5

IRF9-212, Transcript of interferon regulatory factor 9, humanhuman

TSL 2

Gene IRF9, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-212ENST00000561009 C16orf59Q7L2K0 433 aa13.87□□□□□ -0.19
IRF9-212ENST00000561009 ZNF444Q8N0Y2 327 aaPredicted RBP13.87□□□□□ -0.19
IRF9-212ENST00000561009 STK11IPQ8N1F8 1099 aa13.87□□□□□ -0.19
IRF9-212ENST00000561009 HERVK_113Q902F9 699 aa13.87□□□□□ -0.19
IRF9-212ENST00000561009 HAUS7Q99871 368 aa13.87□□□□□ -0.19
IRF9-212ENST00000561009 SEZ6LQ9BYH1 1024 aa13.87□□□□□ -0.19
IRF9-212ENST00000561009 UPF3AQ9H1J1 476 aaKnown RBP13.87□□□□□ -0.19
IRF9-212ENST00000561009 RAVER2Q9HCJ3 691 aaKnown RBP13.87□□□□□ -0.19
IRF9-212ENST00000561009 CLIP2Q9UDT6 1046 aa13.87□□□□□ -0.19
IRF9-212ENST00000561009 FEM1BQ9UK73 627 aa13.87□□□□□ -0.19
IRF9-212ENST00000561009 MINDY4BA8MYZ0 360 aa13.86□□□□□ -0.19
IRF9-212ENST00000561009 FDX1P10109 184 aa13.86□□□□□ -0.19
IRF9-212ENST00000561009 CYP2C18P33260 490 aa13.86□□□□□ -0.19
IRF9-212ENST00000561009 TNFAIP2Q03169 654 aa13.86□□□□□ -0.19
IRF9-212ENST00000561009 SLFNL1Q499Z3 407 aa13.86□□□□□ -0.19
IRF9-212ENST00000561009 CCDC144CPQ8IYA2 1237 aa13.86□□□□□ -0.19
IRF9-212ENST00000561009 RPUSD2Q8IZ73 545 aaKnown RBP13.86□□□□□ -0.19
IRF9-212ENST00000561009 PANK1Q8TE04 598 aa13.86□□□□□ -0.19
IRF9-212ENST00000561009 AP5M1Q9H0R1 490 aa13.86□□□□□ -0.19
IRF9-212ENST00000561009 NKX2-4Q9H2Z4 354 aa13.86□□□□□ -0.19
IRF9-212ENST00000561009 CHMP4BQ9H444 224 aaKnown RBP13.86□□□□□ -0.19
IRF9-212ENST00000561009 HOMER2Q9NSB8 354 aa13.86□□□□□ -0.19
IRF9-212ENST00000561009 PRUNE2Q8WUY3 3088 aa13.86□□□□□ -0.19
IRF9-212ENST00000561009 SMIM22K7EJ46 135 aa13.85□□□□□ -0.19
IRF9-212ENST00000561009 IKQ13123 557 aaPredicted RBP13.85□□□□□ -0.19
IRF9-212ENST00000561009 SKIV2LQ15477 1246 aaKnown RBP13.85□□□□□ -0.19
IRF9-212ENST00000561009 SBK1Q52WX2 424 aa13.85□□□□□ -0.19
IRF9-212ENST00000561009 PPP2R2DQ66LE6 453 aa13.85□□□□□ -0.19
IRF9-212ENST00000561009 GIMAP6Q6P9H5 292 aa13.85□□□□□ -0.19
IRF9-212ENST00000561009 OTOP2Q7RTS6 562 aa13.85□□□□□ -0.19
IRF9-212ENST00000561009 MICALL1Q8N3F8 863 aa13.85□□□□□ -0.19
IRF9-212ENST00000561009 FAM122AQ96E09 287 aa13.85□□□□□ -0.19
IRF9-212ENST00000561009 PUS7LQ9H0K6 701 aaKnown RBP13.85□□□□□ -0.19
IRF9-212ENST00000561009 ACAD9Q9H845 621 aa13.85□□□□□ -0.19
IRF9-212ENST00000561009 SLC38A10Q9HBR0 1119 aa13.85□□□□□ -0.19
IRF9-212ENST00000561009 COG6Q9Y2V7 657 aa13.85□□□□□ -0.19
IRF9-212ENST00000561009 SLC4A7Q9Y6M7 1214 aa13.85□□□□□ -0.19
IRF9-212ENST00000561009 ASB14A6NK59 587 aa13.84□□□□□ -0.19
IRF9-212ENST00000561009 ZBBXA8MT70 800 aa13.84□□□□□ -0.19
IRF9-212ENST00000561009 RASA1P20936 1047 aa13.84□□□□□ -0.19
IRF9-212ENST00000561009 TDO2P48775 406 aa13.84□□□□□ -0.19
IRF9-212ENST00000561009 IRX5P78411 483 aaPredicted RBP13.84□□□□□ -0.19
IRF9-212ENST00000561009 HNRNPUQ00839 825 aaKnown RBP eCLIP13.84□□□□□ -0.19
IRF9-212ENST00000561009 BEX3Q00994 111 aa13.84□□□□□ -0.19
IRF9-212ENST00000561009 ITGA7Q13683 1181 aa13.84□□□□□ -0.19
IRF9-212ENST00000561009 FSCN1Q16658 493 aaKnown RBP13.84□□□□□ -0.19
IRF9-212ENST00000561009 CXCL17Q6UXB2 119 aa13.84□□□□□ -0.19
IRF9-212ENST00000561009 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.84□□□□□ -0.19
IRF9-212ENST00000561009 TLK2Q86UE8 772 aa13.84□□□□□ -0.19
IRF9-212ENST00000561009 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.84□□□□□ -0.19
IRF9-212ENST00000561009 C1QTNF1Q9BXJ1 281 aa13.84□□□□□ -0.19
IRF9-212ENST00000561009 DDX19BQ9UMR2 479 aa13.84□□□□□ -0.19
IRF9-212ENST00000561009 SYNPO2Q9UMS6 1093 aa13.84□□□□□ -0.19
IRF9-212ENST00000561009 CDH23Q9H251 3354 aa13.84□□□□□ -0.19
IRF9-212ENST00000561009 ADCY6O43306 1168 aa13.83□□□□□ -0.2
IRF9-212ENST00000561009 GTPBP6O43824 516 aaPredicted RBP13.83□□□□□ -0.2
IRF9-212ENST00000561009 TTLL1O95922 423 aa13.83□□□□□ -0.2
IRF9-212ENST00000561009 CD4P01730 458 aa13.83□□□□□ -0.2
IRF9-212ENST00000561009 APPP05067 770 aa13.83□□□□□ -0.2
IRF9-212ENST00000561009 BMP3P12645 472 aa13.83□□□□□ -0.2
IRF9-212ENST00000561009 STAT2P52630 851 aa13.83□□□□□ -0.2
IRF9-212ENST00000561009 CCL23P55773 120 aa13.83□□□□□ -0.2
IRF9-212ENST00000561009 ADGRE1Q14246 886 aa13.83□□□□□ -0.2
IRF9-212ENST00000561009 CXXC1Q9P0U4 656 aaPredicted RBP13.83□□□□□ -0.2
IRF9-212ENST00000561009 DYNC1LI2O43237 492 aaPredicted RBP13.82□□□□□ -0.2
IRF9-212ENST00000561009 SLC3A2P08195 630 aaKnown RBP13.82□□□□□ -0.2
IRF9-212ENST00000561009 TSPY3P0CV98 308 aa13.82□□□□□ -0.2
IRF9-212ENST00000561009 TSPY8P0CW00 308 aa13.82□□□□□ -0.2
IRF9-212ENST00000561009 GNAT2P19087 354 aa13.82□□□□□ -0.2
IRF9-212ENST00000561009 PLA2G5P39877 138 aa13.82□□□□□ -0.2
IRF9-212ENST00000561009 NKX3-2P78367 333 aa13.82□□□□□ -0.2
IRF9-212ENST00000561009 CNTN2Q02246 1040 aa13.82□□□□□ -0.2
IRF9-212ENST00000561009 LRRFIP1Q32MZ4 808 aaKnown RBP13.82□□□□□ -0.2
IRF9-212ENST00000561009 SLFN13Q68D06 897 aa13.82□□□□□ -0.2
IRF9-212ENST00000561009 FAM160B2Q86V87 743 aa13.82□□□□□ -0.2
IRF9-212ENST00000561009 GMCL1P1Q8NEA9 526 aa13.82□□□□□ -0.2
IRF9-212ENST00000561009 CHURC1Q8WUH1 139 aa13.82□□□□□ -0.2
IRF9-212ENST00000561009 CEP95Q96GE4 821 aa13.82□□□□□ -0.2
IRF9-212ENST00000561009 GPATCH3Q96I76 525 aa13.82□□□□□ -0.2
IRF9-212ENST00000561009 STRBPQ96SI9 672 aaKnown RBP13.82□□□□□ -0.2
IRF9-212ENST00000561009 RNF146Q9NTX7 359 aa13.82□□□□□ -0.2
IRF9-212ENST00000561009 PCDHA11Q9Y5I1 949 aa13.82□□□□□ -0.2
IRF9-212ENST00000561009 TMEM232C9JQI7 657 aa13.81□□□□□ -0.2
IRF9-212ENST00000561009 CHGBP05060 677 aa13.81□□□□□ -0.2
IRF9-212ENST00000561009 PFKMP08237 780 aa13.81□□□□□ -0.2
IRF9-212ENST00000561009 SUPT20HL2P0C7V6 817 aa13.81□□□□□ -0.2
IRF9-212ENST00000561009 ATP2A2P16615 1042 aaKnown RBP13.81□□□□□ -0.2
IRF9-212ENST00000561009 PDE4BQ07343 736 aa13.81□□□□□ -0.2
IRF9-212ENST00000561009 TKFCQ3LXA3 575 aa13.81□□□□□ -0.2
IRF9-212ENST00000561009 PPP4R3BQ5MIZ7 849 aa13.81□□□□□ -0.2
IRF9-212ENST00000561009 LRRC47Q8N1G4 583 aaKnown RBP13.81□□□□□ -0.2
IRF9-212ENST00000561009 SLC43A3Q8NBI5 491 aa13.81□□□□□ -0.2
IRF9-212ENST00000561009 MKL1Q969V6 931 aa13.81□□□□□ -0.2
IRF9-212ENST00000561009 NACAP1Q9BZK3 213 aa13.81□□□□□ -0.2
IRF9-212ENST00000561009 LRRCC1Q9C099 1032 aa13.81□□□□□ -0.2
IRF9-212ENST00000561009 MTMR4Q9NYA4 1195 aa13.81□□□□□ -0.2
IRF9-212ENST00000561009 YBX2Q9Y2T7 364 aaKnown RBP13.81□□□□□ -0.2
IRF9-212ENST00000561009 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.8□□□□□ -0.2
IRF9-212ENST00000561009 GSG1L2A8MUP6 293 aa13.8□□□□□ -0.2
IRF9-212ENST00000561009 B4GALT4O60513 344 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms